Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 RNU6-1050P-201ENST00000410388 107 ntBASIC-0.34□□□□□ -2.46
SDCBPO00560 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.34□□□□□ -2.46
SDCBPO00560 MTND2P22-201ENST00000444325 1033 ntBASIC-0.34□□□□□ -2.46
SDCBPO00560 RPL7P42-201ENST00000481005 679 ntBASIC-0.34□□□□□ -2.46
SDCBPO00560 AC091951.2-201ENST00000500762 203 ntBASIC-0.34□□□□□ -2.46
SDCBPO00560 RNU6-848P-201ENST00000515948 107 ntBASIC-0.34□□□□□ -2.46
SDCBPO00560 RNU6-617P-201ENST00000516147 107 ntBASIC-0.34□□□□□ -2.46
SDCBPO00560 RNU6-473P-201ENST00000516164 107 ntBASIC-0.34□□□□□ -2.46
SDCBPO00560 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.34□□□□□ -2.46
SDCBPO00560 RNU6-1016P-201ENST00000516689 94 ntBASIC-0.34□□□□□ -2.46
SDCBPO00560 AC011476.5-201ENST00000615594 130 ntBASIC-0.34□□□□□ -2.46
SDCBPO00560 AC087588.2-201ENST00000617667 426 ntBASIC-0.34□□□□□ -2.46
SDCBPO00560 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.35□□□□□ -2.47
SDCBPO00560 RNU4-50P-201ENST00000364361 141 ntBASIC-0.35□□□□□ -2.47
SDCBPO00560 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.35□□□□□ -2.47
SDCBPO00560 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.35□□□□□ -2.47
SDCBPO00560 MT-TF-201ENST00000387314 71 ntBASIC-0.35□□□□□ -2.47
SDCBPO00560 MTND4P28-201ENST00000426217 387 ntBASIC-0.35□□□□□ -2.47
SDCBPO00560 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.35□□□□□ -2.47
SDCBPO00560 RNU7-73P-201ENST00000458743 63 ntBASIC-0.35□□□□□ -2.47
SDCBPO00560 RNU7-165P-201ENST00000458864 60 ntBASIC-0.35□□□□□ -2.47
SDCBPO00560 RNU6-470P-201ENST00000515954 104 ntBASIC-0.35□□□□□ -2.47
SDCBPO00560 Y_RNA.682-201ENST00000516457 100 ntBASIC-0.35□□□□□ -2.47
SDCBPO00560 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.35□□□□□ -2.47
SDCBPO00560 AP000942.4-201ENST00000604811 241 ntBASIC-0.35□□□□□ -2.47
SDCBPO00560 AC022441.3-201ENST00000605737 136 ntBASIC-0.35□□□□□ -2.47
SDCBPO00560 AC067863.3-201ENST00000624172 122 ntBASIC-0.35□□□□□ -2.47
SDCBPO00560 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.35□□□□□ -2.47
SDCBPO00560 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 SNORD115-34-201ENST00000362441 82 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 SNORD115-12-201ENST00000362583 82 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 SNORD115-29-201ENST00000362834 82 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 SNORD115-9-201ENST00000362912 82 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 SNORD115-21-201ENST00000362963 81 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 SNORD115-14-201ENST00000363090 81 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 SNORD115-13-201ENST00000363358 82 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 SNORD115-41-201ENST00000363608 82 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 SNORD115-11-201ENST00000363616 82 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 SNORD115-5-201ENST00000363633 82 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 SNORD115-39-201ENST00000363694 82 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 SNORD115-4-201ENST00000363810 82 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 SNORD115-16-201ENST00000363887 82 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 SNORD115-6-201ENST00000363942 82 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 SNORD115-42-201ENST00000364273 82 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 RNU6-99P-201ENST00000364721 107 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 SNORD115-15-201ENST00000364809 81 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 SNORD115-1-201ENST00000364961 82 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 SNORD115-26-201ENST00000365067 82 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 SNORD115-10-201ENST00000365073 81 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 SNORD115-43-201ENST00000365503 82 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 SNORD115-36-201ENST00000365629 82 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 SNORA75.4-201ENST00000391278 119 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 RNU4-83P-201ENST00000410863 133 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 FCF1P4-201ENST00000448326 183 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 AC098826.2-201ENST00000452011 651 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 RNU7-159P-201ENST00000459284 62 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 MIR2355-201ENST00000517199 87 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 AC007751.1-201ENST00000529260 376 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 MIR3152-201ENST00000579801 74 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 SNORD115-40-201ENST00000606510 82 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 MIR548AY-201ENST00000617669 107 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 AC091304.10-201ENST00000641554 121 ntBASIC-0.36□□□□□ -2.47
SDCBPO00560 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.37□□□□□ -2.47
SDCBPO00560 SNORD116-8-201ENST00000384365 95 ntBASIC-0.37□□□□□ -2.47
SDCBPO00560 SNORD28-201ENST00000384706 75 ntBASIC-0.37□□□□□ -2.47
SDCBPO00560 MIR548O-201ENST00000408583 114 ntBASIC-0.37□□□□□ -2.47
SDCBPO00560 SNORD93-201ENST00000408813 74 ntBASIC-0.37□□□□□ -2.47
SDCBPO00560 RNA5SP127-201ENST00000411051 133 ntBASIC-0.37□□□□□ -2.47
SDCBPO00560 RNU6-938P-201ENST00000411285 103 ntBASIC-0.37□□□□□ -2.47
SDCBPO00560 MIR2053-201ENST00000459295 91 ntBASIC-0.37□□□□□ -2.47
SDCBPO00560 AC107297.1-201ENST00000459991 176 ntBASIC-0.37□□□□□ -2.47
SDCBPO00560 RNU6-120P-201ENST00000516077 103 ntBASIC-0.37□□□□□ -2.47
SDCBPO00560 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.37□□□□□ -2.47
SDCBPO00560 MIR1295B-201ENST00000636144 60 ntBASIC-0.37□□□□□ -2.47
SDCBPO00560 RNU6-1042P-201ENST00000384204 107 ntBASIC-0.38□□□□□ -2.47
SDCBPO00560 MIR501-201ENST00000390204 84 ntBASIC-0.38□□□□□ -2.47
SDCBPO00560 Y_RNA.592-201ENST00000410274 109 ntBASIC-0.38□□□□□ -2.47
SDCBPO00560 RNU6-710P-201ENST00000410424 105 ntBASIC-0.38□□□□□ -2.47
SDCBPO00560 POLR2KP2-201ENST00000438155 177 ntBASIC-0.38□□□□□ -2.47
SDCBPO00560 MTND3P10-201ENST00000450967 341 ntBASIC-0.38□□□□□ -2.47
SDCBPO00560 RNU6-437P-201ENST00000459408 95 ntBASIC-0.38□□□□□ -2.47
SDCBPO00560 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.38□□□□□ -2.47
SDCBPO00560 AC131281.1-201ENST00000522984 164 ntBASIC-0.38□□□□□ -2.47
SDCBPO00560 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.38□□□□□ -2.47
SDCBPO00560 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.38□□□□□ -2.47
SDCBPO00560 AC138869.1-201ENST00000568623 124 ntBASIC-0.38□□□□□ -2.47
SDCBPO00560 DEFB117-201ENST00000602356 141 ntBASIC-0.38□□□□□ -2.47
SDCBPO00560 AL109933.3-201ENST00000619095 188 ntBASIC-0.38□□□□□ -2.47
SDCBPO00560 SNORD81.1-201ENST00000363064 77 ntBASIC-0.39□□□□□ -2.47
SDCBPO00560 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.39□□□□□ -2.47
SDCBPO00560 RNU4-75P-201ENST00000364621 146 ntBASIC-0.39□□□□□ -2.47
SDCBPO00560 SNORA1.1-201ENST00000364671 133 ntBASIC-0.39□□□□□ -2.47
SDCBPO00560 RNU6-1013P-201ENST00000384180 107 ntBASIC-0.39□□□□□ -2.47
SDCBPO00560 RNU6-269P-201ENST00000391077 97 ntBASIC-0.39□□□□□ -2.47
SDCBPO00560 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.39□□□□□ -2.47
SDCBPO00560 MIR892B-201ENST00000401279 77 ntBASIC-0.39□□□□□ -2.47
SDCBPO00560 RNA5SP163-201ENST00000410304 99 ntBASIC-0.39□□□□□ -2.47
SDCBPO00560 RNU2-14P-201ENST00000411053 191 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms