Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.37□□□□□ -2.03
CCDC85CA6NKD9 RPL23AP6-201ENST00000446637 472 ntBASIC2.37□□□□□ -2.03
CCDC85CA6NKD9 RNA5SP200-201ENST00000516360 103 ntBASIC2.37□□□□□ -2.03
CCDC85CA6NKD9 AC067747.1-201ENST00000608026 250 ntBASIC2.37□□□□□ -2.03
CCDC85CA6NKD9 Y_RNA.783-201ENST00000613546 102 ntBASIC2.37□□□□□ -2.03
CCDC85CA6NKD9 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC85CA6NKD9 AL596028.1-201ENST00000326971 197 ntBASIC2.36□□□□□ -2.03
CCDC85CA6NKD9 RNU6-1123P-201ENST00000362347 106 ntBASIC2.36□□□□□ -2.03
CCDC85CA6NKD9 Y_RNA.357-201ENST00000365487 109 ntBASIC2.36□□□□□ -2.03
CCDC85CA6NKD9 SNORD24-201ENST00000383884 75 ntBASIC2.36□□□□□ -2.03
CCDC85CA6NKD9 RNU6-442P-201ENST00000383968 104 ntBASIC2.36□□□□□ -2.03
CCDC85CA6NKD9 AC004965.1-201ENST00000413033 213 ntBASIC2.36□□□□□ -2.03
CCDC85CA6NKD9 AC114811.1-201ENST00000507207 168 ntBASIC2.36□□□□□ -2.03
CCDC85CA6NKD9 MIR4285-201ENST00000581001 85 ntBASIC2.36□□□□□ -2.03
CCDC85CA6NKD9 AC022709.1-201ENST00000615967 87 ntBASIC2.36□□□□□ -2.03
CCDC85CA6NKD9 RNU6-1084P-201ENST00000362498 107 ntBASIC2.35□□□□□ -2.03
CCDC85CA6NKD9 Y_RNA.66-201ENST00000362862 102 ntBASIC2.35□□□□□ -2.03
CCDC85CA6NKD9 RNU6-392P-201ENST00000364926 101 ntBASIC2.35□□□□□ -2.03
CCDC85CA6NKD9 MIR144-201ENST00000384886 86 ntBASIC2.35□□□□□ -2.03
CCDC85CA6NKD9 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC85CA6NKD9 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC85CA6NKD9 JTBP1-201ENST00000441314 247 ntBASIC2.35□□□□□ -2.03
CCDC85CA6NKD9 RNU7-95P-201ENST00000459222 64 ntBASIC2.35□□□□□ -2.03
CCDC85CA6NKD9 MIR3683-201ENST00000580847 82 ntBASIC2.35□□□□□ -2.03
CCDC85CA6NKD9 AL512598.1-201ENST00000610158 273 ntBASIC2.35□□□□□ -2.03
CCDC85CA6NKD9 MIR6766-201ENST00000622641 72 ntBASIC2.35□□□□□ -2.03
CCDC85CA6NKD9 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC85CA6NKD9 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC85CA6NKD9 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC85CA6NKD9 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.34□□□□□ -2.03
CCDC85CA6NKD9 Y_RNA.91-201ENST00000363042 107 ntBASIC2.34□□□□□ -2.03
CCDC85CA6NKD9 SNORD114-22-201ENST00000365423 72 ntBASIC2.34□□□□□ -2.03
CCDC85CA6NKD9 MIR891A-201ENST00000401237 79 ntBASIC2.34□□□□□ -2.03
CCDC85CA6NKD9 RNU2-70P-201ENST00000410718 179 ntBASIC2.34□□□□□ -2.03
CCDC85CA6NKD9 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC85CA6NKD9 RNU6-365P-201ENST00000517113 106 ntBASIC2.34□□□□□ -2.03
CCDC85CA6NKD9 MIR3144-201ENST00000579460 79 ntBASIC2.34□□□□□ -2.03
CCDC85CA6NKD9 MIR378D2-201ENST00000580636 98 ntBASIC2.34□□□□□ -2.03
CCDC85CA6NKD9 MIR3670-2-201ENST00000582974 65 ntBASIC2.34□□□□□ -2.03
CCDC85CA6NKD9 MIR3670-1-201ENST00000584160 65 ntBASIC2.34□□□□□ -2.03
CCDC85CA6NKD9 MIR3670-3-201ENST00000584855 65 ntBASIC2.34□□□□□ -2.03
CCDC85CA6NKD9 AC103810.8-201ENST00000607347 118 ntBASIC2.34□□□□□ -2.03
CCDC85CA6NKD9 AL627230.6-201ENST00000611129 280 ntBASIC2.34□□□□□ -2.03
CCDC85CA6NKD9 MIR3670-4-201ENST00000612260 65 ntBASIC2.34□□□□□ -2.03
CCDC85CA6NKD9 RNU6-978P-201ENST00000364371 103 ntBASIC2.33□□□□□ -2.04
CCDC85CA6NKD9 Y_RNA.337-201ENST00000365312 102 ntBASIC2.33□□□□□ -2.04
CCDC85CA6NKD9 RNU6-597P-201ENST00000365620 102 ntBASIC2.33□□□□□ -2.04
CCDC85CA6NKD9 RNU6-163P-201ENST00000384396 106 ntBASIC2.33□□□□□ -2.04
CCDC85CA6NKD9 RNA5SP102-201ENST00000516865 106 ntBASIC2.33□□□□□ -2.04
CCDC85CA6NKD9 RNU6-1116P-201ENST00000517269 99 ntBASIC2.33□□□□□ -2.04
CCDC85CA6NKD9 MIR6840-201ENST00000611937 71 ntBASIC2.33□□□□□ -2.04
CCDC85CA6NKD9 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.32□□□□□ -2.04
CCDC85CA6NKD9 RNU6-268P-201ENST00000364174 107 ntBASIC2.32□□□□□ -2.04
CCDC85CA6NKD9 RNU6-203P-201ENST00000384038 104 ntBASIC2.32□□□□□ -2.04
CCDC85CA6NKD9 AL627390.1-201ENST00000396055 340 ntBASIC2.32□□□□□ -2.04
CCDC85CA6NKD9 RPS27P21-201ENST00000486977 252 ntBASIC2.32□□□□□ -2.04
CCDC85CA6NKD9 RNA5SP61-201ENST00000516453 100 ntBASIC2.32□□□□□ -2.04
CCDC85CA6NKD9 RNU6-504P-201ENST00000516568 104 ntBASIC2.32□□□□□ -2.04
CCDC85CA6NKD9 MIR8081-201ENST00000611533 95 ntBASIC2.32□□□□□ -2.04
CCDC85CA6NKD9 RNU6-888P-201ENST00000363010 101 ntBASIC2.31□□□□□ -2.04
CCDC85CA6NKD9 RNU6-414P-201ENST00000363705 104 ntBASIC2.31□□□□□ -2.04
CCDC85CA6NKD9 RNA5SP37-201ENST00000365420 130 ntBASIC2.31□□□□□ -2.04
CCDC85CA6NKD9 MIR802-201ENST00000390235 94 ntBASIC2.31□□□□□ -2.04
CCDC85CA6NKD9 AC006461.1-201ENST00000412637 326 ntBASIC2.31□□□□□ -2.04
CCDC85CA6NKD9 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC85CA6NKD9 RNU7-12P-201ENST00000516030 62 ntBASIC2.31□□□□□ -2.04
CCDC85CA6NKD9 RNU6-255P-201ENST00000516957 105 ntBASIC2.31□□□□□ -2.04
CCDC85CA6NKD9 AC090142.3-201ENST00000519012 385 ntBASIC2.31□□□□□ -2.04
CCDC85CA6NKD9 AC121758.2-201ENST00000553271 193 ntBASIC2.31□□□□□ -2.04
CCDC85CA6NKD9 AL096840.1-201ENST00000603287 93 ntBASIC2.31□□□□□ -2.04
CCDC85CA6NKD9 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC85CA6NKD9 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC85CA6NKD9 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC85CA6NKD9 ZNF355P-201ENST00000427301 3216 ntBASIC2.3□□□□□ -2.04
CCDC85CA6NKD9 MIR598-201ENST00000384868 97 ntBASIC2.3□□□□□ -2.04
CCDC85CA6NKD9 SNORA67.5-201ENST00000391036 107 ntBASIC2.3□□□□□ -2.04
CCDC85CA6NKD9 SNRPGP13-201ENST00000442212 177 ntBASIC2.3□□□□□ -2.04
CCDC85CA6NKD9 RNU6-830P-201ENST00000516353 107 ntBASIC2.3□□□□□ -2.04
CCDC85CA6NKD9 SNORD116-25-201ENST00000516517 92 ntBASIC2.3□□□□□ -2.04
CCDC85CA6NKD9 SNORA77B-201ENST00000578179 125 ntBASIC2.3□□□□□ -2.04
CCDC85CA6NKD9 SNORD3E-202ENST00000627253 216 ntBASIC2.3□□□□□ -2.04
CCDC85CA6NKD9 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.3□□□□□ -2.04
CCDC85CA6NKD9 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CCDC85CA6NKD9 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CCDC85CA6NKD9 RNY1P5-201ENST00000383890 115 ntBASIC2.29□□□□□ -2.04
CCDC85CA6NKD9 Y_RNA.393-201ENST00000383936 102 ntBASIC2.29□□□□□ -2.04
CCDC85CA6NKD9 RNU6-439P-201ENST00000384188 106 ntBASIC2.29□□□□□ -2.04
CCDC85CA6NKD9 RNU6-804P-201ENST00000384286 107 ntBASIC2.29□□□□□ -2.04
CCDC85CA6NKD9 MIR452-201ENST00000385020 85 ntBASIC2.29□□□□□ -2.04
CCDC85CA6NKD9 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.29□□□□□ -2.04
CCDC85CA6NKD9 AC007751.1-201ENST00000529260 376 ntBASIC2.29□□□□□ -2.04
CCDC85CA6NKD9 MIR3646-201ENST00000578301 84 ntBASIC2.29□□□□□ -2.04
CCDC85CA6NKD9 DNAJC19P2-201ENST00000593340 302 ntBASIC2.29□□□□□ -2.04
CCDC85CA6NKD9 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC85CA6NKD9 MTND1P7-201ENST00000632801 297 ntBASIC2.29□□□□□ -2.04
CCDC85CA6NKD9 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.29□□□□□ -2.04
CCDC85CA6NKD9 Y_RNA.170-201ENST00000363746 110 ntBASIC2.28□□□□□ -2.04
CCDC85CA6NKD9 SNORD61-201ENST00000384252 73 ntBASIC2.28□□□□□ -2.04
CCDC85CA6NKD9 MIR548A2-201ENST00000384956 97 ntBASIC2.28□□□□□ -2.04
CCDC85CA6NKD9 Y_RNA.666-201ENST00000516187 112 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms