Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC010332.2-201ENST00000613083 1904 ntBASIC-0.11□□□□□ -2.43
RBFOX3A6NFN3 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.11□□□□□ -2.43
RBFOX3A6NFN3 SNORA72.1-201ENST00000363485 129 ntBASIC-0.11□□□□□ -2.43
RBFOX3A6NFN3 SNORD115-47-201ENST00000391226 86 ntBASIC-0.11□□□□□ -2.43
RBFOX3A6NFN3 SNORA75.4-201ENST00000391278 119 ntBASIC-0.11□□□□□ -2.43
RBFOX3A6NFN3 MIR1257-201ENST00000408490 117 ntBASIC-0.11□□□□□ -2.43
RBFOX3A6NFN3 AF228730.4-201ENST00000421457 183 ntBASIC-0.11□□□□□ -2.43
RBFOX3A6NFN3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-0.11□□□□□ -2.43
RBFOX3A6NFN3 RPL30P15-201ENST00000457129 321 ntBASIC-0.11□□□□□ -2.43
RBFOX3A6NFN3 AC107297.1-201ENST00000459991 176 ntBASIC-0.11□□□□□ -2.43
RBFOX3A6NFN3 TRBVB-201ENST00000477100 408 ntBASIC-0.11□□□□□ -2.43
RBFOX3A6NFN3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.11□□□□□ -2.43
RBFOX3A6NFN3 AC134878.1-201ENST00000619901 243 ntBASIC-0.11□□□□□ -2.43
RBFOX3A6NFN3 Y_RNA.88-201ENST00000363029 99 ntBASIC-0.12□□□□□ -2.43
RBFOX3A6NFN3 Y_RNA.194-201ENST00000363985 102 ntBASIC-0.12□□□□□ -2.43
RBFOX3A6NFN3 RNU6-302P-201ENST00000365249 107 ntBASIC-0.12□□□□□ -2.43
RBFOX3A6NFN3 RNA5SP117-201ENST00000365294 118 ntBASIC-0.12□□□□□ -2.43
RBFOX3A6NFN3 RNU6V-201ENST00000384105 107 ntBASIC-0.12□□□□□ -2.43
RBFOX3A6NFN3 Y_RNA.554-201ENST00000384672 102 ntBASIC-0.12□□□□□ -2.43
RBFOX3A6NFN3 AL590004.1-201ENST00000405321 300 ntBASIC-0.12□□□□□ -2.43
RBFOX3A6NFN3 RNU6-1156P-201ENST00000410365 100 ntBASIC-0.12□□□□□ -2.43
RBFOX3A6NFN3 AC005042.3-201ENST00000453230 174 ntBASIC-0.12□□□□□ -2.43
RBFOX3A6NFN3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.12□□□□□ -2.43
RBFOX3A6NFN3 RNU7-185P-201ENST00000459215 60 ntBASIC-0.12□□□□□ -2.43
RBFOX3A6NFN3 AC091951.2-201ENST00000500762 203 ntBASIC-0.12□□□□□ -2.43
RBFOX3A6NFN3 RNU6-470P-201ENST00000515954 104 ntBASIC-0.12□□□□□ -2.43
RBFOX3A6NFN3 RNU6-448P-201ENST00000517052 107 ntBASIC-0.12□□□□□ -2.43
RBFOX3A6NFN3 RNU7-156P-201ENST00000517214 74 ntBASIC-0.12□□□□□ -2.43
RBFOX3A6NFN3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.12□□□□□ -2.43
RBFOX3A6NFN3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-0.12□□□□□ -2.43
RBFOX3A6NFN3 AC098679.4-201ENST00000624241 654 ntBASIC-0.12□□□□□ -2.43
RBFOX3A6NFN3 SNORA9.1-201ENST00000362412 131 ntBASIC-0.13□□□□□ -2.43
RBFOX3A6NFN3 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.13□□□□□ -2.43
RBFOX3A6NFN3 SNORA36.1-201ENST00000363424 132 ntBASIC-0.13□□□□□ -2.43
RBFOX3A6NFN3 RNU6-674P-201ENST00000363831 107 ntBASIC-0.13□□□□□ -2.43
RBFOX3A6NFN3 U8.7-201ENST00000364940 136 ntBASIC-0.13□□□□□ -2.43
RBFOX3A6NFN3 SNORD38B-201ENST00000384690 67 ntBASIC-0.13□□□□□ -2.43
RBFOX3A6NFN3 Y_RNA.570-201ENST00000384750 101 ntBASIC-0.13□□□□□ -2.43
RBFOX3A6NFN3 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.13□□□□□ -2.43
RBFOX3A6NFN3 MTND3P8-201ENST00000412909 339 ntBASIC-0.13□□□□□ -2.43
RBFOX3A6NFN3 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.13□□□□□ -2.43
RBFOX3A6NFN3 SNORD11-201ENST00000459124 84 ntBASIC-0.13□□□□□ -2.43
RBFOX3A6NFN3 RNU6-437P-201ENST00000459408 95 ntBASIC-0.13□□□□□ -2.43
RBFOX3A6NFN3 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.13□□□□□ -2.43
RBFOX3A6NFN3 RNU7-4P-201ENST00000516961 62 ntBASIC-0.13□□□□□ -2.43
RBFOX3A6NFN3 AC133485.4-201ENST00000561835 220 ntBASIC-0.13□□□□□ -2.43
RBFOX3A6NFN3 MIR4659A-201ENST00000580269 81 ntBASIC-0.13□□□□□ -2.43
RBFOX3A6NFN3 AC103591.3-201ENST00000608684 209 ntBASIC-0.13□□□□□ -2.43
RBFOX3A6NFN3 SNORD38B-202ENST00000625943 69 ntBASIC-0.13□□□□□ -2.43
RBFOX3A6NFN3 Z97988.1-201ENST00000637697 135 ntBASIC-0.13□□□□□ -2.43
RBFOX3A6NFN3 SNORD115-34-201ENST00000362441 82 ntBASIC-0.14□□□□□ -2.43
RBFOX3A6NFN3 SNORD115-12-201ENST00000362583 82 ntBASIC-0.14□□□□□ -2.43
RBFOX3A6NFN3 SNORD115-29-201ENST00000362834 82 ntBASIC-0.14□□□□□ -2.43
RBFOX3A6NFN3 SNORD115-9-201ENST00000362912 82 ntBASIC-0.14□□□□□ -2.43
RBFOX3A6NFN3 SNORD115-21-201ENST00000362963 81 ntBASIC-0.14□□□□□ -2.43
RBFOX3A6NFN3 SNORD115-14-201ENST00000363090 81 ntBASIC-0.14□□□□□ -2.43
RBFOX3A6NFN3 SNORD115-13-201ENST00000363358 82 ntBASIC-0.14□□□□□ -2.43
RBFOX3A6NFN3 SNORD115-41-201ENST00000363608 82 ntBASIC-0.14□□□□□ -2.43
RBFOX3A6NFN3 SNORD115-11-201ENST00000363616 82 ntBASIC-0.14□□□□□ -2.43
RBFOX3A6NFN3 SNORD115-5-201ENST00000363633 82 ntBASIC-0.14□□□□□ -2.43
RBFOX3A6NFN3 SNORD115-39-201ENST00000363694 82 ntBASIC-0.14□□□□□ -2.43
RBFOX3A6NFN3 SNORD115-4-201ENST00000363810 82 ntBASIC-0.14□□□□□ -2.43
RBFOX3A6NFN3 SNORD115-16-201ENST00000363887 82 ntBASIC-0.14□□□□□ -2.43
RBFOX3A6NFN3 SNORD115-6-201ENST00000363942 82 ntBASIC-0.14□□□□□ -2.43
RBFOX3A6NFN3 SNORD115-42-201ENST00000364273 82 ntBASIC-0.14□□□□□ -2.43
RBFOX3A6NFN3 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.14□□□□□ -2.43
RBFOX3A6NFN3 SNORD115-15-201ENST00000364809 81 ntBASIC-0.14□□□□□ -2.43
RBFOX3A6NFN3 SNORD115-1-201ENST00000364961 82 ntBASIC-0.14□□□□□ -2.43
RBFOX3A6NFN3 SNORD115-26-201ENST00000365067 82 ntBASIC-0.14□□□□□ -2.43
RBFOX3A6NFN3 SNORD115-10-201ENST00000365073 81 ntBASIC-0.14□□□□□ -2.43
RBFOX3A6NFN3 SNORD115-43-201ENST00000365503 82 ntBASIC-0.14□□□□□ -2.43
RBFOX3A6NFN3 SNORD115-36-201ENST00000365629 82 ntBASIC-0.14□□□□□ -2.43
RBFOX3A6NFN3 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.14□□□□□ -2.43
RBFOX3A6NFN3 AC236972.2-201ENST00000434979 310 ntBASIC-0.14□□□□□ -2.43
RBFOX3A6NFN3 RNU7-73P-201ENST00000458743 63 ntBASIC-0.14□□□□□ -2.43
RBFOX3A6NFN3 AC026407.1-201ENST00000518369 204 ntBASIC-0.14□□□□□ -2.43
RBFOX3A6NFN3 AC144568.1-201ENST00000520139 137 ntBASIC-0.14□□□□□ -2.43
RBFOX3A6NFN3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.14□□□□□ -2.43
RBFOX3A6NFN3 MIR4423-201ENST00000580922 80 ntBASIC-0.14□□□□□ -2.43
RBFOX3A6NFN3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.14□□□□□ -2.43
RBFOX3A6NFN3 SNORD115-40-201ENST00000606510 82 ntBASIC-0.14□□□□□ -2.43
RBFOX3A6NFN3 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.14□□□□□ -2.43
RBFOX3A6NFN3 MIR518F-201ENST00000384973 87 ntBASIC-0.15□□□□□ -2.43
RBFOX3A6NFN3 PCNPP3-201ENST00000393579 471 ntBASIC-0.15□□□□□ -2.43
RBFOX3A6NFN3 AC024067.1-201ENST00000426199 223 ntBASIC-0.15□□□□□ -2.43
RBFOX3A6NFN3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-0.15□□□□□ -2.43
RBFOX3A6NFN3 AC141557.1-201ENST00000540982 400 ntBASIC-0.15□□□□□ -2.43
RBFOX3A6NFN3 AL080274.1-201ENST00000605565 220 ntBASIC-0.15□□□□□ -2.43
RBFOX3A6NFN3 AC090517.2-201ENST00000614966 680 ntBASIC-0.15□□□□□ -2.43
RBFOX3A6NFN3 AC011476.5-201ENST00000615594 130 ntBASIC-0.15□□□□□ -2.43
RBFOX3A6NFN3 U4.5-201ENST00000617137 123 ntBASIC-0.15□□□□□ -2.43
RBFOX3A6NFN3 MIR6755-201ENST00000619993 66 ntBASIC-0.15□□□□□ -2.43
RBFOX3A6NFN3 SNORA32.1-201ENST00000364514 115 ntBASIC-0.16□□□□□ -2.44
RBFOX3A6NFN3 RNU4-75P-201ENST00000364621 146 ntBASIC-0.16□□□□□ -2.44
RBFOX3A6NFN3 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.16□□□□□ -2.44
RBFOX3A6NFN3 MIR588-201ENST00000384900 83 ntBASIC-0.16□□□□□ -2.44
RBFOX3A6NFN3 MIR563-201ENST00000385080 79 ntBASIC-0.16□□□□□ -2.44
RBFOX3A6NFN3 RNA5SP496-201ENST00000391240 109 ntBASIC-0.16□□□□□ -2.44
RBFOX3A6NFN3 RNU7-67P-201ENST00000459003 62 ntBASIC-0.16□□□□□ -2.44
RBFOX3A6NFN3 snoU13.2-201ENST00000459201 104 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms