Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 RNU6-360P-201ENST00000390944 104 ntBASIC2.24□□□□□ -2.05
PTPDC1A2A3K4 SNORD37.2-201ENST00000391075 66 ntBASIC2.24□□□□□ -2.05
PTPDC1A2A3K4 RNA5SP212-201ENST00000391223 107 ntBASIC2.24□□□□□ -2.05
PTPDC1A2A3K4 U8.16-201ENST00000391279 133 ntBASIC2.24□□□□□ -2.05
PTPDC1A2A3K4 HMGN2P23-201ENST00000456759 269 ntBASIC2.24□□□□□ -2.05
PTPDC1A2A3K4 AC114811.1-201ENST00000507207 168 ntBASIC2.24□□□□□ -2.05
PTPDC1A2A3K4 RNA5SP168-201ENST00000516642 112 ntBASIC2.24□□□□□ -2.05
PTPDC1A2A3K4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.24□□□□□ -2.05
PTPDC1A2A3K4 MIR3935-201ENST00000583472 104 ntBASIC2.24□□□□□ -2.05
PTPDC1A2A3K4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.24□□□□□ -2.05
PTPDC1A2A3K4 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.24□□□□□ -2.05
PTPDC1A2A3K4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
PTPDC1A2A3K4 RNU6-199P-201ENST00000362954 107 ntBASIC2.23□□□□□ -2.05
PTPDC1A2A3K4 SNORA25.7-201ENST00000364375 127 ntBASIC2.23□□□□□ -2.05
PTPDC1A2A3K4 RNU6-818P-201ENST00000364837 108 ntBASIC2.23□□□□□ -2.05
PTPDC1A2A3K4 SNORD24-201ENST00000383884 75 ntBASIC2.23□□□□□ -2.05
PTPDC1A2A3K4 MIR613-201ENST00000385248 95 ntBASIC2.23□□□□□ -2.05
PTPDC1A2A3K4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
PTPDC1A2A3K4 SNORA75.5-201ENST00000391291 81 ntBASIC2.23□□□□□ -2.05
PTPDC1A2A3K4 RPS27P21-201ENST00000486977 252 ntBASIC2.23□□□□□ -2.05
PTPDC1A2A3K4 RNU6-1116P-201ENST00000517269 99 ntBASIC2.23□□□□□ -2.05
PTPDC1A2A3K4 MIR548X2-201ENST00000579776 100 ntBASIC2.23□□□□□ -2.05
PTPDC1A2A3K4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.23□□□□□ -2.05
PTPDC1A2A3K4 AC021506.2-201ENST00000612354 169 ntBASIC2.23□□□□□ -2.05
PTPDC1A2A3K4 AC006441.5-201ENST00000612680 209 ntBASIC2.23□□□□□ -2.05
PTPDC1A2A3K4 ZNF355P-201ENST00000427301 3216 ntBASIC2.23□□□□□ -2.05
PTPDC1A2A3K4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
PTPDC1A2A3K4 Y_RNA.343-201ENST00000365354 112 ntBASIC2.22□□□□□ -2.05
PTPDC1A2A3K4 SNORD50.2-201ENST00000365465 70 ntBASIC2.22□□□□□ -2.05
PTPDC1A2A3K4 SNORA26.9-201ENST00000391322 122 ntBASIC2.22□□□□□ -2.05
PTPDC1A2A3K4 SNRPGP14-201ENST00000435400 219 ntBASIC2.22□□□□□ -2.05
PTPDC1A2A3K4 SNRPGP13-201ENST00000442212 177 ntBASIC2.22□□□□□ -2.05
PTPDC1A2A3K4 Y_RNA.666-201ENST00000516187 112 ntBASIC2.22□□□□□ -2.05
PTPDC1A2A3K4 RNA5SP458-201ENST00000516188 119 ntBASIC2.22□□□□□ -2.05
PTPDC1A2A3K4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.22□□□□□ -2.05
PTPDC1A2A3K4 AC112693.2-201ENST00000556538 232 ntBASIC2.22□□□□□ -2.05
PTPDC1A2A3K4 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.22□□□□□ -2.05
PTPDC1A2A3K4 AL513423.1-201ENST00000621695 132 ntBASIC2.22□□□□□ -2.05
PTPDC1A2A3K4 AL359851.1-201ENST00000569460 4997 ntBASIC2.22□□□□□ -2.05
PTPDC1A2A3K4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
PTPDC1A2A3K4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.05
PTPDC1A2A3K4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.21□□□□□ -2.06
PTPDC1A2A3K4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
PTPDC1A2A3K4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PTPDC1A2A3K4 RNU6-888P-201ENST00000363010 101 ntBASIC2.21□□□□□ -2.06
PTPDC1A2A3K4 RNU6-833P-201ENST00000363486 107 ntBASIC2.21□□□□□ -2.06
PTPDC1A2A3K4 RNU6-268P-201ENST00000364174 107 ntBASIC2.21□□□□□ -2.06
PTPDC1A2A3K4 SNORD61-201ENST00000384252 73 ntBASIC2.21□□□□□ -2.06
PTPDC1A2A3K4 MIR513C-201ENST00000401352 84 ntBASIC2.21□□□□□ -2.06
PTPDC1A2A3K4 RNU2-40P-201ENST00000410833 196 ntBASIC2.21□□□□□ -2.06
PTPDC1A2A3K4 CYCSP49-201ENST00000420810 319 ntBASIC2.21□□□□□ -2.06
PTPDC1A2A3K4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.21□□□□□ -2.06
PTPDC1A2A3K4 AC099513.1-201ENST00000490423 301 ntBASIC2.21□□□□□ -2.06
PTPDC1A2A3K4 RNA5SP182-201ENST00000516064 82 ntBASIC2.21□□□□□ -2.06
PTPDC1A2A3K4 MIR891A-201ENST00000401237 79 ntBASIC2.2□□□□□ -2.06
PTPDC1A2A3K4 SUMO2P12-201ENST00000405924 140 ntBASIC2.2□□□□□ -2.06
PTPDC1A2A3K4 AC003989.2-201ENST00000440224 169 ntBASIC2.2□□□□□ -2.06
PTPDC1A2A3K4 RNU7-12P-201ENST00000516030 62 ntBASIC2.2□□□□□ -2.06
PTPDC1A2A3K4 RNU6-693P-201ENST00000516134 107 ntBASIC2.2□□□□□ -2.06
PTPDC1A2A3K4 RNA5SP364-201ENST00000516938 78 ntBASIC2.2□□□□□ -2.06
PTPDC1A2A3K4 AC007751.1-201ENST00000529260 376 ntBASIC2.2□□□□□ -2.06
PTPDC1A2A3K4 AL773524.1-201ENST00000614065 229 ntBASIC2.2□□□□□ -2.06
PTPDC1A2A3K4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
PTPDC1A2A3K4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
PTPDC1A2A3K4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
PTPDC1A2A3K4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
PTPDC1A2A3K4 RNU6-704P-201ENST00000364162 103 ntBASIC2.19□□□□□ -2.06
PTPDC1A2A3K4 MIR569-201ENST00000385228 96 ntBASIC2.19□□□□□ -2.06
PTPDC1A2A3K4 RNU6-588P-201ENST00000410281 105 ntBASIC2.19□□□□□ -2.06
PTPDC1A2A3K4 HMGN2P38-201ENST00000423806 265 ntBASIC2.19□□□□□ -2.06
PTPDC1A2A3K4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.19□□□□□ -2.06
PTPDC1A2A3K4 MIR514B-201ENST00000516774 80 ntBASIC2.19□□□□□ -2.06
PTPDC1A2A3K4 RNU6-1270P-201ENST00000517128 108 ntBASIC2.19□□□□□ -2.06
PTPDC1A2A3K4 AL365205.2-201ENST00000594586 68 ntBASIC2.19□□□□□ -2.06
PTPDC1A2A3K4 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PTPDC1A2A3K4 RNU6-1082P-201ENST00000364574 107 ntBASIC2.18□□□□□ -2.06
PTPDC1A2A3K4 Y_RNA.542-201ENST00000384641 111 ntBASIC2.18□□□□□ -2.06
PTPDC1A2A3K4 MIR660-201ENST00000385235 97 ntBASIC2.18□□□□□ -2.06
PTPDC1A2A3K4 MIR548O-201ENST00000408583 114 ntBASIC2.18□□□□□ -2.06
PTPDC1A2A3K4 RNA5SP489-201ENST00000410986 109 ntBASIC2.18□□□□□ -2.06
PTPDC1A2A3K4 AC244636.1-201ENST00000421152 228 ntBASIC2.18□□□□□ -2.06
PTPDC1A2A3K4 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.18□□□□□ -2.06
PTPDC1A2A3K4 AL603825.1-201ENST00000438481 80 ntBASIC2.18□□□□□ -2.06
PTPDC1A2A3K4 PGBD4P5-201ENST00000445958 426 ntBASIC2.18□□□□□ -2.06
PTPDC1A2A3K4 RNU6-789P-201ENST00000517105 102 ntBASIC2.18□□□□□ -2.06
PTPDC1A2A3K4 MIR4287-201ENST00000579398 78 ntBASIC2.18□□□□□ -2.06
PTPDC1A2A3K4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.18□□□□□ -2.06
PTPDC1A2A3K4 MIR424-201ENST00000362227 98 ntBASIC2.17□□□□□ -2.06
PTPDC1A2A3K4 RNU4-52P-201ENST00000384209 138 ntBASIC2.17□□□□□ -2.06
PTPDC1A2A3K4 SNORD38C-201ENST00000384381 69 ntBASIC2.17□□□□□ -2.06
PTPDC1A2A3K4 Y_RNA.568-201ENST00000384742 113 ntBASIC2.17□□□□□ -2.06
PTPDC1A2A3K4 MIR548A2-201ENST00000384956 97 ntBASIC2.17□□□□□ -2.06
PTPDC1A2A3K4 AL356379.1-201ENST00000414105 126 ntBASIC2.17□□□□□ -2.06
PTPDC1A2A3K4 SNORA25.12-201ENST00000516202 82 ntBASIC2.17□□□□□ -2.06
PTPDC1A2A3K4 AC090142.3-201ENST00000519012 385 ntBASIC2.17□□□□□ -2.06
PTPDC1A2A3K4 AP001485.1-201ENST00000604799 199 ntBASIC2.17□□□□□ -2.06
PTPDC1A2A3K4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
PTPDC1A2A3K4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
PTPDC1A2A3K4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
PTPDC1A2A3K4 RNU6-1336P-201ENST00000383886 109 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 1381 ms