Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 AC096531.1-201ENST00000419107 107 ntBASIC-0.43□□□□□ -2.48
TRAV1-1A0A0B4J248 MTCO1P5-201ENST00000433573 344 ntBASIC-0.43□□□□□ -2.48
TRAV1-1A0A0B4J248 AC087499.4-201ENST00000448505 178 ntBASIC-0.43□□□□□ -2.48
TRAV1-1A0A0B4J248 AC107297.1-201ENST00000459991 176 ntBASIC-0.43□□□□□ -2.48
TRAV1-1A0A0B4J248 RNU6-966P-201ENST00000516479 104 ntBASIC-0.43□□□□□ -2.48
TRAV1-1A0A0B4J248 RNU6-180P-201ENST00000516697 61 ntBASIC-0.43□□□□□ -2.48
TRAV1-1A0A0B4J248 Y_RNA.695-201ENST00000516715 107 ntBASIC-0.43□□□□□ -2.48
TRAV1-1A0A0B4J248 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.43□□□□□ -2.48
TRAV1-1A0A0B4J248 MIR5188-201ENST00000583467 113 ntBASIC-0.43□□□□□ -2.48
TRAV1-1A0A0B4J248 MIR3925-201ENST00000584674 77 ntBASIC-0.43□□□□□ -2.48
TRAV1-1A0A0B4J248 AP003357.1-201ENST00000604497 148 ntBASIC-0.43□□□□□ -2.48
TRAV1-1A0A0B4J248 JPX_2.1-201ENST00000614161 69 ntBASIC-0.43□□□□□ -2.48
TRAV1-1A0A0B4J248 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.44□□□□□ -2.48
TRAV1-1A0A0B4J248 RNU6-652P-201ENST00000365488 107 ntBASIC-0.44□□□□□ -2.48
TRAV1-1A0A0B4J248 RNU4-83P-201ENST00000410863 133 ntBASIC-0.44□□□□□ -2.48
TRAV1-1A0A0B4J248 MTATP6P19-201ENST00000413797 659 ntBASIC-0.44□□□□□ -2.48
TRAV1-1A0A0B4J248 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-0.44□□□□□ -2.48
TRAV1-1A0A0B4J248 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.44□□□□□ -2.48
TRAV1-1A0A0B4J248 MIR3942-201ENST00000585264 109 ntBASIC-0.44□□□□□ -2.48
TRAV1-1A0A0B4J248 DLEU2_1.1-201ENST00000612089 120 ntBASIC-0.44□□□□□ -2.48
TRAV1-1A0A0B4J248 SNORA70.25-201ENST00000612741 95 ntBASIC-0.44□□□□□ -2.48
TRAV1-1A0A0B4J248 DLEU2_1.2-201ENST00000614667 120 ntBASIC-0.44□□□□□ -2.48
TRAV1-1A0A0B4J248 AC244669.1-204ENST00000621564 178 ntBASIC-0.44□□□□□ -2.48
TRAV1-1A0A0B4J248 SNORD115-34-201ENST00000362441 82 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 SNORD115-12-201ENST00000362583 82 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 SNORD115-29-201ENST00000362834 82 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 SNORD115-9-201ENST00000362912 82 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 SNORD115-21-201ENST00000362963 81 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 SNORD115-14-201ENST00000363090 81 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 SNORD115-13-201ENST00000363358 82 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 SNORD115-41-201ENST00000363608 82 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 SNORD115-11-201ENST00000363616 82 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 SNORD115-5-201ENST00000363633 82 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 SNORD115-39-201ENST00000363694 82 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 SNORD115-4-201ENST00000363810 82 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 RNU6-674P-201ENST00000363831 107 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 SNORD115-16-201ENST00000363887 82 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 SNORD115-6-201ENST00000363942 82 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 SNORD115-42-201ENST00000364273 82 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 SNORD115-15-201ENST00000364809 81 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 SNORD115-1-201ENST00000364961 82 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 Y_RNA.310-201ENST00000365063 113 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 SNORD115-26-201ENST00000365067 82 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 SNORD115-10-201ENST00000365073 81 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 SNORD115-43-201ENST00000365503 82 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 SNORD115-36-201ENST00000365629 82 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 RNU6-602P-201ENST00000411155 105 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 RNU6-956P-201ENST00000458868 103 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 RNU6-958P-201ENST00000516995 106 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 RNU6-897P-201ENST00000517135 105 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 MIR2355-201ENST00000517199 87 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 MIR548AD-201ENST00000584780 82 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 AL133255.1-201ENST00000606374 441 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 SNORD115-40-201ENST00000606510 82 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 AC006157.1-201ENST00000611750 366 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 AC073114.1-201ENST00000612027 490 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 AL442067.1-201ENST00000613261 223 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 MIR6514-201ENST00000622549 70 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 MIR6863-201ENST00000636112 90 ntBASIC-0.45□□□□□ -2.48
TRAV1-1A0A0B4J248 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.46□□□□□ -2.48
TRAV1-1A0A0B4J248 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.46□□□□□ -2.48
TRAV1-1A0A0B4J248 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.46□□□□□ -2.48
TRAV1-1A0A0B4J248 RNA5SP300-201ENST00000391197 107 ntBASIC-0.46□□□□□ -2.48
TRAV1-1A0A0B4J248 MIR1278-201ENST00000408753 81 ntBASIC-0.46□□□□□ -2.48
TRAV1-1A0A0B4J248 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.46□□□□□ -2.48
TRAV1-1A0A0B4J248 SNORD93-201ENST00000408813 74 ntBASIC-0.46□□□□□ -2.48
TRAV1-1A0A0B4J248 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.46□□□□□ -2.48
TRAV1-1A0A0B4J248 AC108059.2-201ENST00000434626 151 ntBASIC-0.46□□□□□ -2.48
TRAV1-1A0A0B4J248 MTND2P22-201ENST00000444325 1033 ntBASIC-0.46□□□□□ -2.48
TRAV1-1A0A0B4J248 RNU7-67P-201ENST00000459003 62 ntBASIC-0.46□□□□□ -2.48
TRAV1-1A0A0B4J248 RNU7-25P-201ENST00000516544 62 ntBASIC-0.46□□□□□ -2.48
TRAV1-1A0A0B4J248 AC131281.1-201ENST00000522984 164 ntBASIC-0.46□□□□□ -2.48
TRAV1-1A0A0B4J248 MIR4639-201ENST00000584938 69 ntBASIC-0.46□□□□□ -2.48
TRAV1-1A0A0B4J248 AL162413.1-201ENST00000603198 110 ntBASIC-0.46□□□□□ -2.48
TRAV1-1A0A0B4J248 AC018462.2-201ENST00000605375 395 ntBASIC-0.46□□□□□ -2.48
TRAV1-1A0A0B4J248 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.46□□□□□ -2.48
TRAV1-1A0A0B4J248 AL359880.1-201ENST00000621879 266 ntBASIC-0.46□□□□□ -2.48
TRAV1-1A0A0B4J248 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.47□□□□□ -2.48
TRAV1-1A0A0B4J248 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.47□□□□□ -2.48
TRAV1-1A0A0B4J248 RNU6-291P-201ENST00000384720 107 ntBASIC-0.47□□□□□ -2.48
TRAV1-1A0A0B4J248 RNU6-332P-201ENST00000391193 108 ntBASIC-0.47□□□□□ -2.48
TRAV1-1A0A0B4J248 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-0.47□□□□□ -2.48
TRAV1-1A0A0B4J248 SNORD126-201ENST00000459475 77 ntBASIC-0.47□□□□□ -2.48
TRAV1-1A0A0B4J248 RNU6-864P-201ENST00000516256 108 ntBASIC-0.47□□□□□ -2.48
TRAV1-1A0A0B4J248 RNU1-54P-201ENST00000517181 120 ntBASIC-0.47□□□□□ -2.48
TRAV1-1A0A0B4J248 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.47□□□□□ -2.48
TRAV1-1A0A0B4J248 AC024405.2-202ENST00000532731 184 ntBASIC-0.47□□□□□ -2.48
TRAV1-1A0A0B4J248 AL512360.1-201ENST00000555346 234 ntBASIC-0.47□□□□□ -2.48
TRAV1-1A0A0B4J248 AC127455.1-201ENST00000565496 145 ntBASIC-0.47□□□□□ -2.48
TRAV1-1A0A0B4J248 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-0.47□□□□□ -2.48
TRAV1-1A0A0B4J248 MTND5P34-201ENST00000568888 325 ntBASIC-0.47□□□□□ -2.48
TRAV1-1A0A0B4J248 NBR2-204ENST00000587322 63 ntBASIC-0.47□□□□□ -2.48
TRAV1-1A0A0B4J248 AC108676.2-201ENST00000605225 163 ntBASIC-0.47□□□□□ -2.48
TRAV1-1A0A0B4J248 AC124864.2-201ENST00000624736 186 ntBASIC-0.47□□□□□ -2.48
TRAV1-1A0A0B4J248 RNU6-451P-201ENST00000362921 107 ntBASIC-0.48□□□□□ -2.49
TRAV1-1A0A0B4J248 RNU6-403P-201ENST00000363163 104 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms