Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 RNU6-365P-201ENST00000517113 106 ntBASIC2.43□□□□□ -2.02
R3HCC1Q9Y3T6 MIR3935-201ENST00000583472 104 ntBASIC2.43□□□□□ -2.02
R3HCC1Q9Y3T6 AC008555.8-201ENST00000623602 2168 ntBASIC2.43□□□□□ -2.02
R3HCC1Q9Y3T6 Y_RNA.337-201ENST00000365312 102 ntBASIC2.42□□□□□ -2.02
R3HCC1Q9Y3T6 RNU6-449P-201ENST00000383914 107 ntBASIC2.42□□□□□ -2.02
R3HCC1Q9Y3T6 RNU6-442P-201ENST00000383968 104 ntBASIC2.42□□□□□ -2.02
R3HCC1Q9Y3T6 MIR17-201ENST00000385012 84 ntBASIC2.42□□□□□ -2.02
R3HCC1Q9Y3T6 MIR221-201ENST00000385135 110 ntBASIC2.42□□□□□ -2.02
R3HCC1Q9Y3T6 AL603908.1-201ENST00000406098 201 ntBASIC2.42□□□□□ -2.02
R3HCC1Q9Y3T6 AC093850.1-201ENST00000454121 251 ntBASIC2.42□□□□□ -2.02
R3HCC1Q9Y3T6 RNU7-12P-201ENST00000516030 62 ntBASIC2.42□□□□□ -2.02
R3HCC1Q9Y3T6 RNU6-346P-201ENST00000516288 111 ntBASIC2.42□□□□□ -2.02
R3HCC1Q9Y3T6 MIR4299-201ENST00000577899 72 ntBASIC2.42□□□□□ -2.02
R3HCC1Q9Y3T6 MIR3133-201ENST00000583157 78 ntBASIC2.42□□□□□ -2.02
R3HCC1Q9Y3T6 AC027279.3-201ENST00000625055 122 ntBASIC2.42□□□□□ -2.02
R3HCC1Q9Y3T6 AC095038.3-201ENST00000634439 195 ntBASIC2.42□□□□□ -2.02
R3HCC1Q9Y3T6 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
R3HCC1Q9Y3T6 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
R3HCC1Q9Y3T6 RNU6-268P-201ENST00000364174 107 ntBASIC2.41□□□□□ -2.02
R3HCC1Q9Y3T6 SNORD61-201ENST00000384252 73 ntBASIC2.41□□□□□ -2.02
R3HCC1Q9Y3T6 MIR802-201ENST00000390235 94 ntBASIC2.41□□□□□ -2.02
R3HCC1Q9Y3T6 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
R3HCC1Q9Y3T6 MIR548M-201ENST00000408260 86 ntBASIC2.41□□□□□ -2.02
R3HCC1Q9Y3T6 SNORA11.2-201ENST00000408318 127 ntBASIC2.41□□□□□ -2.02
R3HCC1Q9Y3T6 Z98742.3-201ENST00000418637 326 ntBASIC2.41□□□□□ -2.02
R3HCC1Q9Y3T6 CYCSP49-201ENST00000420810 319 ntBASIC2.41□□□□□ -2.02
R3HCC1Q9Y3T6 PGBD4P5-201ENST00000445958 426 ntBASIC2.41□□□□□ -2.02
R3HCC1Q9Y3T6 DNAJC19P2-201ENST00000593340 302 ntBASIC2.41□□□□□ -2.02
R3HCC1Q9Y3T6 AL513423.1-201ENST00000621695 132 ntBASIC2.41□□□□□ -2.02
R3HCC1Q9Y3T6 U8.2-201ENST00000363156 134 ntBASIC2.4□□□□□ -2.03
R3HCC1Q9Y3T6 RNU6-151P-201ENST00000364158 107 ntBASIC2.4□□□□□ -2.03
R3HCC1Q9Y3T6 Y_RNA.336-201ENST00000365307 109 ntBASIC2.4□□□□□ -2.03
R3HCC1Q9Y3T6 RNU6-1336P-201ENST00000383886 109 ntBASIC2.4□□□□□ -2.03
R3HCC1Q9Y3T6 Y_RNA.521-201ENST00000384560 114 ntBASIC2.4□□□□□ -2.03
R3HCC1Q9Y3T6 MIR548A2-201ENST00000384956 97 ntBASIC2.4□□□□□ -2.03
R3HCC1Q9Y3T6 SNORA26-201ENST00000391286 122 ntBASIC2.4□□□□□ -2.03
R3HCC1Q9Y3T6 RPL30P13-201ENST00000418873 348 ntBASIC2.4□□□□□ -2.03
R3HCC1Q9Y3T6 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
R3HCC1Q9Y3T6 SNORD116-25-201ENST00000516517 92 ntBASIC2.4□□□□□ -2.03
R3HCC1Q9Y3T6 RNU6-126P-201ENST00000516685 103 ntBASIC2.4□□□□□ -2.03
R3HCC1Q9Y3T6 MIR4778-201ENST00000577635 80 ntBASIC2.4□□□□□ -2.03
R3HCC1Q9Y3T6 AC006441.5-201ENST00000612680 209 ntBASIC2.4□□□□□ -2.03
R3HCC1Q9Y3T6 RNU6-833P-201ENST00000363486 107 ntBASIC2.39□□□□□ -2.03
R3HCC1Q9Y3T6 Y_RNA.393-201ENST00000383936 102 ntBASIC2.39□□□□□ -2.03
R3HCC1Q9Y3T6 RNU6-746P-201ENST00000384112 109 ntBASIC2.39□□□□□ -2.03
R3HCC1Q9Y3T6 MIR660-201ENST00000385235 97 ntBASIC2.39□□□□□ -2.03
R3HCC1Q9Y3T6 MIR891A-201ENST00000401237 79 ntBASIC2.39□□□□□ -2.03
R3HCC1Q9Y3T6 RN7SKP192-201ENST00000411291 327 ntBASIC2.39□□□□□ -2.03
R3HCC1Q9Y3T6 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.39□□□□□ -2.03
R3HCC1Q9Y3T6 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.39□□□□□ -2.03
R3HCC1Q9Y3T6 RN7SL274P-201ENST00000492268 272 ntBASIC2.39□□□□□ -2.03
R3HCC1Q9Y3T6 MIR514B-201ENST00000516774 80 ntBASIC2.39□□□□□ -2.03
R3HCC1Q9Y3T6 RNU6-1270P-201ENST00000517128 108 ntBASIC2.39□□□□□ -2.03
R3HCC1Q9Y3T6 AC007751.1-201ENST00000529260 376 ntBASIC2.39□□□□□ -2.03
R3HCC1Q9Y3T6 Y_RNA.778-201ENST00000620203 90 ntBASIC2.39□□□□□ -2.03
R3HCC1Q9Y3T6 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
R3HCC1Q9Y3T6 MIR424-201ENST00000362227 98 ntBASIC2.38□□□□□ -2.03
R3HCC1Q9Y3T6 RNA5SP126-201ENST00000365092 109 ntBASIC2.38□□□□□ -2.03
R3HCC1Q9Y3T6 RNU6-187P-201ENST00000384139 106 ntBASIC2.38□□□□□ -2.03
R3HCC1Q9Y3T6 MIR194-1-201ENST00000384892 85 ntBASIC2.38□□□□□ -2.03
R3HCC1Q9Y3T6 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.38□□□□□ -2.03
R3HCC1Q9Y3T6 HMGN2P32-201ENST00000444648 269 ntBASIC2.38□□□□□ -2.03
R3HCC1Q9Y3T6 RPL23AP6-201ENST00000446637 472 ntBASIC2.38□□□□□ -2.03
R3HCC1Q9Y3T6 RNA5SP200-201ENST00000516360 103 ntBASIC2.38□□□□□ -2.03
R3HCC1Q9Y3T6 RNU6-504P-201ENST00000516568 104 ntBASIC2.38□□□□□ -2.03
R3HCC1Q9Y3T6 MIR1273D-201ENST00000577266 86 ntBASIC2.38□□□□□ -2.03
R3HCC1Q9Y3T6 AC009831.4-201ENST00000620744 325 ntBASIC2.38□□□□□ -2.03
R3HCC1Q9Y3T6 SNORD3E-202ENST00000627253 216 ntBASIC2.38□□□□□ -2.03
R3HCC1Q9Y3T6 MTND1P7-201ENST00000632801 297 ntBASIC2.38□□□□□ -2.03
R3HCC1Q9Y3T6 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.38□□□□□ -2.03
R3HCC1Q9Y3T6 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
R3HCC1Q9Y3T6 Y_RNA.242-201ENST00000364473 110 ntBASIC2.37□□□□□ -2.03
R3HCC1Q9Y3T6 RNU4-11P-201ENST00000365287 132 ntBASIC2.37□□□□□ -2.03
R3HCC1Q9Y3T6 RNY1P5-201ENST00000383890 115 ntBASIC2.37□□□□□ -2.03
R3HCC1Q9Y3T6 SNORA48.3-201ENST00000391081 134 ntBASIC2.37□□□□□ -2.03
R3HCC1Q9Y3T6 SNRPGP13-201ENST00000442212 177 ntBASIC2.37□□□□□ -2.03
R3HCC1Q9Y3T6 RNU6-693P-201ENST00000516134 107 ntBASIC2.37□□□□□ -2.03
R3HCC1Q9Y3T6 RNU7-25P-201ENST00000516544 62 ntBASIC2.37□□□□□ -2.03
R3HCC1Q9Y3T6 Y_RNA.703-201ENST00000516846 111 ntBASIC2.37□□□□□ -2.03
R3HCC1Q9Y3T6 MIR4713-201ENST00000582691 75 ntBASIC2.37□□□□□ -2.03
R3HCC1Q9Y3T6 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
R3HCC1Q9Y3T6 RNU6-888P-201ENST00000363010 101 ntBASIC2.36□□□□□ -2.03
R3HCC1Q9Y3T6 RNY1P11-201ENST00000363759 113 ntBASIC2.36□□□□□ -2.03
R3HCC1Q9Y3T6 RNU6-1082P-201ENST00000364574 107 ntBASIC2.36□□□□□ -2.03
R3HCC1Q9Y3T6 RNU6-597P-201ENST00000365620 102 ntBASIC2.36□□□□□ -2.03
R3HCC1Q9Y3T6 SNORD24-201ENST00000383884 75 ntBASIC2.36□□□□□ -2.03
R3HCC1Q9Y3T6 Y_RNA.400-201ENST00000383963 111 ntBASIC2.36□□□□□ -2.03
R3HCC1Q9Y3T6 SNORA1-201ENST00000384107 130 ntBASIC2.36□□□□□ -2.03
R3HCC1Q9Y3T6 MIR518F-201ENST00000384973 87 ntBASIC2.36□□□□□ -2.03
R3HCC1Q9Y3T6 SUMO2P12-201ENST00000405924 140 ntBASIC2.36□□□□□ -2.03
R3HCC1Q9Y3T6 MIR548O-201ENST00000408583 114 ntBASIC2.36□□□□□ -2.03
R3HCC1Q9Y3T6 AL356379.1-201ENST00000414105 126 ntBASIC2.36□□□□□ -2.03
R3HCC1Q9Y3T6 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.36□□□□□ -2.03
R3HCC1Q9Y3T6 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.36□□□□□ -2.03
R3HCC1Q9Y3T6 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.35□□□□□ -2.03
R3HCC1Q9Y3T6 SNORA70B-201ENST00000384210 135 ntBASIC2.35□□□□□ -2.03
R3HCC1Q9Y3T6 SNORA3.2-201ENST00000408221 125 ntBASIC2.35□□□□□ -2.03
R3HCC1Q9Y3T6 RNU2-40P-201ENST00000410833 196 ntBASIC2.35□□□□□ -2.03
R3HCC1Q9Y3T6 AL161935.2-201ENST00000414627 60 ntBASIC2.35□□□□□ -2.03
R3HCC1Q9Y3T6 MIR6844-201ENST00000637122 62 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms