Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 Y_RNA.383-201ENST00000383855 97 ntBASIC0.39□□□□□ -2.35
KCNIP3Q9Y2W7 SNORA36.2-201ENST00000384004 127 ntBASIC0.39□□□□□ -2.35
KCNIP3Q9Y2W7 RNU2-14P-201ENST00000411053 191 ntBASIC0.39□□□□□ -2.35
KCNIP3Q9Y2W7 RNU6-847P-201ENST00000411115 108 ntBASIC0.39□□□□□ -2.35
KCNIP3Q9Y2W7 Y_RNA.632-201ENST00000459189 102 ntBASIC0.39□□□□□ -2.35
KCNIP3Q9Y2W7 U8.20-201ENST00000459445 131 ntBASIC0.39□□□□□ -2.35
KCNIP3Q9Y2W7 AC010655.3-201ENST00000478818 450 ntBASIC0.39□□□□□ -2.35
KCNIP3Q9Y2W7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.39□□□□□ -2.35
KCNIP3Q9Y2W7 SNORD58B-201ENST00000607313 66 ntBASIC0.39□□□□□ -2.35
KCNIP3Q9Y2W7 RNU4-80P-201ENST00000363200 141 ntBASIC0.38□□□□□ -2.35
KCNIP3Q9Y2W7 RNU6-1048P-201ENST00000364054 107 ntBASIC0.38□□□□□ -2.35
KCNIP3Q9Y2W7 RNY1P8-201ENST00000383970 114 ntBASIC0.38□□□□□ -2.35
KCNIP3Q9Y2W7 Y_RNA.526-201ENST00000384572 110 ntBASIC0.38□□□□□ -2.35
KCNIP3Q9Y2W7 MIR140-201ENST00000385282 100 ntBASIC0.38□□□□□ -2.35
KCNIP3Q9Y2W7 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.38□□□□□ -2.35
KCNIP3Q9Y2W7 MTND1P14-201ENST00000427400 950 ntBASIC0.38□□□□□ -2.35
KCNIP3Q9Y2W7 POLR2KP2-201ENST00000438155 177 ntBASIC0.38□□□□□ -2.35
KCNIP3Q9Y2W7 snoU13.21-201ENST00000459368 105 ntBASIC0.38□□□□□ -2.35
KCNIP3Q9Y2W7 SNORD19B-201ENST00000459623 84 ntBASIC0.38□□□□□ -2.35
KCNIP3Q9Y2W7 FGF7P4-201ENST00000509595 295 ntBASIC0.38□□□□□ -2.35
KCNIP3Q9Y2W7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.38□□□□□ -2.35
KCNIP3Q9Y2W7 MIR4264-201ENST00000583520 66 ntBASIC0.38□□□□□ -2.35
KCNIP3Q9Y2W7 AP000753.3-201ENST00000604083 169 ntBASIC0.38□□□□□ -2.35
KCNIP3Q9Y2W7 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.38□□□□□ -2.35
KCNIP3Q9Y2W7 AC243994.1-201ENST00000618627 109 ntBASIC0.38□□□□□ -2.35
KCNIP3Q9Y2W7 AC068700.1-201ENST00000565862 3754 ntBASIC0.38□□□□□ -2.35
KCNIP3Q9Y2W7 RNY3-201ENST00000365484 102 ntBASIC0.37□□□□□ -2.35
KCNIP3Q9Y2W7 RNU6-125P-201ENST00000384505 107 ntBASIC0.37□□□□□ -2.35
KCNIP3Q9Y2W7 RNU6-1248P-201ENST00000391096 64 ntBASIC0.37□□□□□ -2.35
KCNIP3Q9Y2W7 AC114737.2-201ENST00000421583 173 ntBASIC0.37□□□□□ -2.35
KCNIP3Q9Y2W7 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.37□□□□□ -2.35
KCNIP3Q9Y2W7 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.37□□□□□ -2.35
KCNIP3Q9Y2W7 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.37□□□□□ -2.35
KCNIP3Q9Y2W7 snoU13.31-201ENST00000607291 104 ntBASIC0.37□□□□□ -2.35
KCNIP3Q9Y2W7 uc_338.4-201ENST00000616635 176 ntBASIC0.37□□□□□ -2.35
KCNIP3Q9Y2W7 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.37□□□□□ -2.35
KCNIP3Q9Y2W7 Y_RNA.5-201ENST00000362334 102 ntBASIC0.36□□□□□ -2.35
KCNIP3Q9Y2W7 Y_RNA.143-201ENST00000363520 106 ntBASIC0.36□□□□□ -2.35
KCNIP3Q9Y2W7 SNORA24-201ENST00000384096 131 ntBASIC0.36□□□□□ -2.35
KCNIP3Q9Y2W7 SNORA26.5-201ENST00000391215 123 ntBASIC0.36□□□□□ -2.35
KCNIP3Q9Y2W7 MTCO2P12-201ENST00000427426 682 ntBASIC0.36□□□□□ -2.35
KCNIP3Q9Y2W7 Y_RNA.661-201ENST00000516003 99 ntBASIC0.36□□□□□ -2.35
KCNIP3Q9Y2W7 RNU6-976P-201ENST00000516086 111 ntBASIC0.36□□□□□ -2.35
KCNIP3Q9Y2W7 DEFB108E-201ENST00000524692 240 ntBASIC0.36□□□□□ -2.35
KCNIP3Q9Y2W7 SNORD113-5-201ENST00000607261 78 ntBASIC0.36□□□□□ -2.35
KCNIP3Q9Y2W7 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.36□□□□□ -2.35
KCNIP3Q9Y2W7 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.35□□□□□ -2.35
KCNIP3Q9Y2W7 Y_RNA.222-201ENST00000364264 102 ntBASIC0.35□□□□□ -2.35
KCNIP3Q9Y2W7 RNU6-1283P-201ENST00000365314 105 ntBASIC0.35□□□□□ -2.35
KCNIP3Q9Y2W7 RNU4-45P-201ENST00000365469 141 ntBASIC0.35□□□□□ -2.35
KCNIP3Q9Y2W7 MIR520H-201ENST00000385126 88 ntBASIC0.35□□□□□ -2.35
KCNIP3Q9Y2W7 RNU6-205P-201ENST00000390858 107 ntBASIC0.35□□□□□ -2.35
KCNIP3Q9Y2W7 SEPT14P8-201ENST00000508026 178 ntBASIC0.35□□□□□ -2.35
KCNIP3Q9Y2W7 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.34□□□□□ -2.35
KCNIP3Q9Y2W7 Y_RNA.286-201ENST00000364813 102 ntBASIC0.34□□□□□ -2.36
KCNIP3Q9Y2W7 RNU6-934P-201ENST00000365154 107 ntBASIC0.34□□□□□ -2.36
KCNIP3Q9Y2W7 Y_RNA.471-201ENST00000384312 102 ntBASIC0.34□□□□□ -2.36
KCNIP3Q9Y2W7 MIR520F-201ENST00000384824 87 ntBASIC0.34□□□□□ -2.36
KCNIP3Q9Y2W7 RNU6-130P-201ENST00000411112 103 ntBASIC0.34□□□□□ -2.36
KCNIP3Q9Y2W7 SNORD83.1-201ENST00000411362 77 ntBASIC0.34□□□□□ -2.36
KCNIP3Q9Y2W7 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.34□□□□□ -2.36
KCNIP3Q9Y2W7 snoU13.16-201ENST00000459350 104 ntBASIC0.34□□□□□ -2.36
KCNIP3Q9Y2W7 SNORA68.3-201ENST00000515906 83 ntBASIC0.34□□□□□ -2.36
KCNIP3Q9Y2W7 RNU6-977P-201ENST00000516411 103 ntBASIC0.34□□□□□ -2.36
KCNIP3Q9Y2W7 RNU7-25P-201ENST00000516544 62 ntBASIC0.34□□□□□ -2.36
KCNIP3Q9Y2W7 AL359821.1-201ENST00000605519 182 ntBASIC0.34□□□□□ -2.36
KCNIP3Q9Y2W7 PART1_1.1-201ENST00000611761 217 ntBASIC0.34□□□□□ -2.36
KCNIP3Q9Y2W7 AC022140.2-201ENST00000623500 188 ntBASIC0.34□□□□□ -2.36
KCNIP3Q9Y2W7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
KCNIP3Q9Y2W7 Y_RNA.80-201ENST00000362996 102 ntBASIC0.33□□□□□ -2.36
KCNIP3Q9Y2W7 RNU6-899P-201ENST00000363947 107 ntBASIC0.33□□□□□ -2.36
KCNIP3Q9Y2W7 Y_RNA.485-201ENST00000384395 102 ntBASIC0.33□□□□□ -2.36
KCNIP3Q9Y2W7 RNU6-342P-201ENST00000384521 104 ntBASIC0.33□□□□□ -2.36
KCNIP3Q9Y2W7 Y_RNA.547-201ENST00000384654 119 ntBASIC0.33□□□□□ -2.36
KCNIP3Q9Y2W7 MIR548O-201ENST00000408583 114 ntBASIC0.33□□□□□ -2.36
KCNIP3Q9Y2W7 AC244023.1-201ENST00000426884 112 ntBASIC0.33□□□□□ -2.36
KCNIP3Q9Y2W7 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.33□□□□□ -2.36
KCNIP3Q9Y2W7 RNU6-475P-201ENST00000516073 104 ntBASIC0.33□□□□□ -2.36
KCNIP3Q9Y2W7 RNU6-191P-201ENST00000516295 94 ntBASIC0.33□□□□□ -2.36
KCNIP3Q9Y2W7 CYP3A137P-201ENST00000562436 69 ntBASIC0.33□□□□□ -2.36
KCNIP3Q9Y2W7 MIR4771-2-201ENST00000577758 74 ntBASIC0.33□□□□□ -2.36
KCNIP3Q9Y2W7 MIR4771-1-201ENST00000582617 74 ntBASIC0.33□□□□□ -2.36
KCNIP3Q9Y2W7 AC242498.1-201ENST00000604134 111 ntBASIC0.33□□□□□ -2.36
KCNIP3Q9Y2W7 LARP7P1-201ENST00000605576 316 ntBASIC0.33□□□□□ -2.36
KCNIP3Q9Y2W7 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
KCNIP3Q9Y2W7 MIR18A-201ENST00000362310 71 ntBASIC0.32□□□□□ -2.36
KCNIP3Q9Y2W7 SNORA72.1-201ENST00000363485 129 ntBASIC0.32□□□□□ -2.36
KCNIP3Q9Y2W7 RNU6-144P-201ENST00000383951 107 ntBASIC0.32□□□□□ -2.36
KCNIP3Q9Y2W7 Y_RNA.418-201ENST00000384029 102 ntBASIC0.32□□□□□ -2.36
KCNIP3Q9Y2W7 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.32□□□□□ -2.36
KCNIP3Q9Y2W7 AC090844.1-201ENST00000422019 156 ntBASIC0.32□□□□□ -2.36
KCNIP3Q9Y2W7 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.32□□□□□ -2.36
KCNIP3Q9Y2W7 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.32□□□□□ -2.36
KCNIP3Q9Y2W7 RNU6-1170P-201ENST00000515974 106 ntBASIC0.32□□□□□ -2.36
KCNIP3Q9Y2W7 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.32□□□□□ -2.36
KCNIP3Q9Y2W7 AC040926.1-201ENST00000530195 238 ntBASIC0.32□□□□□ -2.36
KCNIP3Q9Y2W7 MIR4804-201ENST00000581683 73 ntBASIC0.32□□□□□ -2.36
KCNIP3Q9Y2W7 AL021707.8-201ENST00000609428 183 ntBASIC0.32□□□□□ -2.36
KCNIP3Q9Y2W7 MIR6767-201ENST00000637302 66 ntBASIC0.32□□□□□ -2.36
KCNIP3Q9Y2W7 MIRLET7D-201ENST00000362263 87 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms