Protein–RNA interactions for Protein: Q9Y228

TRAF3IP3, TRAF3-interacting JNK-activating modulator, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3Q9Y228 MIR1302-2-201ENST00000607096 138 ntBASIC0.63□□□□□ -2.31
TRAF3IP3Q9Y228 AC007485.1-201ENST00000616755 206 ntBASIC0.63□□□□□ -2.31
TRAF3IP3Q9Y228 AC008133.2-201ENST00000624540 351 ntBASIC0.63□□□□□ -2.31
TRAF3IP3Q9Y228 MIR6516-201ENST00000630554 81 ntBASIC0.63□□□□□ -2.31
TRAF3IP3Q9Y228 RNU4-73P-201ENST00000363164 141 ntBASIC0.62□□□□□ -2.31
TRAF3IP3Q9Y228 RNU4-80P-201ENST00000363200 141 ntBASIC0.62□□□□□ -2.31
TRAF3IP3Q9Y228 SNORD14E-201ENST00000364009 85 ntBASIC0.62□□□□□ -2.31
TRAF3IP3Q9Y228 SNORA25.9-201ENST00000365087 128 ntBASIC0.62□□□□□ -2.31
TRAF3IP3Q9Y228 Y_RNA.418-201ENST00000384029 102 ntBASIC0.62□□□□□ -2.31
TRAF3IP3Q9Y228 SNORA72.4-201ENST00000384174 132 ntBASIC0.62□□□□□ -2.31
TRAF3IP3Q9Y228 MIR92A1-201ENST00000385233 78 ntBASIC0.62□□□□□ -2.31
TRAF3IP3Q9Y228 SNORD72-201ENST00000390994 80 ntBASIC0.62□□□□□ -2.31
TRAF3IP3Q9Y228 AC236972.2-201ENST00000434979 310 ntBASIC0.62□□□□□ -2.31
TRAF3IP3Q9Y228 AC113410.1-201ENST00000505029 247 ntBASIC0.62□□□□□ -2.31
TRAF3IP3Q9Y228 MTND3P22-201ENST00000510932 243 ntBASIC0.62□□□□□ -2.31
TRAF3IP3Q9Y228 Y_RNA.702-201ENST00000516843 96 ntBASIC0.62□□□□□ -2.31
TRAF3IP3Q9Y228 Y_RNA.714-201ENST00000517065 90 ntBASIC0.62□□□□□ -2.31
TRAF3IP3Q9Y228 AC040926.1-201ENST00000530195 238 ntBASIC0.62□□□□□ -2.31
TRAF3IP3Q9Y228 MIR4714-201ENST00000580728 77 ntBASIC0.62□□□□□ -2.31
TRAF3IP3Q9Y228 MIR548S-201ENST00000581352 82 ntBASIC0.62□□□□□ -2.31
TRAF3IP3Q9Y228 MIR4801-201ENST00000582704 82 ntBASIC0.62□□□□□ -2.31
TRAF3IP3Q9Y228 MIR4795-201ENST00000584182 89 ntBASIC0.62□□□□□ -2.31
TRAF3IP3Q9Y228 SNORD42.2-201ENST00000365570 69 ntBASIC0.61□□□□□ -2.31
TRAF3IP3Q9Y228 Y_RNA.471-201ENST00000384312 102 ntBASIC0.61□□□□□ -2.31
TRAF3IP3Q9Y228 RNU6-110P-201ENST00000384508 104 ntBASIC0.61□□□□□ -2.31
TRAF3IP3Q9Y228 SNORA36B-201ENST00000410438 131 ntBASIC0.61□□□□□ -2.31
TRAF3IP3Q9Y228 U7.7-201ENST00000459276 60 ntBASIC0.61□□□□□ -2.31
TRAF3IP3Q9Y228 RNU6-437P-201ENST00000459408 95 ntBASIC0.61□□□□□ -2.31
TRAF3IP3Q9Y228 COX6CP6-201ENST00000490840 228 ntBASIC0.61□□□□□ -2.31
TRAF3IP3Q9Y228 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.61□□□□□ -2.31
TRAF3IP3Q9Y228 RNU2-13P-201ENST00000515909 113 ntBASIC0.61□□□□□ -2.31
TRAF3IP3Q9Y228 RNU6-191P-201ENST00000516295 94 ntBASIC0.61□□□□□ -2.31
TRAF3IP3Q9Y228 RNU6-1046P-201ENST00000516538 107 ntBASIC0.61□□□□□ -2.31
TRAF3IP3Q9Y228 AP003484.1-201ENST00000530974 250 ntBASIC0.61□□□□□ -2.31
TRAF3IP3Q9Y228 AC005357.1-201ENST00000588399 301 ntBASIC0.61□□□□□ -2.31
TRAF3IP3Q9Y228 AL133255.1-201ENST00000606374 441 ntBASIC0.61□□□□□ -2.31
TRAF3IP3Q9Y228 RNU6-94P-201ENST00000607728 107 ntBASIC0.61□□□□□ -2.31
TRAF3IP3Q9Y228 AC006157.1-201ENST00000611750 366 ntBASIC0.61□□□□□ -2.31
TRAF3IP3Q9Y228 AC006441.5-201ENST00000612680 209 ntBASIC0.61□□□□□ -2.31
TRAF3IP3Q9Y228 Pinc.1-201ENST00000616452 154 ntBASIC0.61□□□□□ -2.31
TRAF3IP3Q9Y228 MIR6788-201ENST00000618842 66 ntBASIC0.61□□□□□ -2.31
TRAF3IP3Q9Y228 MIR4251-201ENST00000635819 61 ntBASIC0.61□□□□□ -2.31
TRAF3IP3Q9Y228 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
TRAF3IP3Q9Y228 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
TRAF3IP3Q9Y228 RNU6-442P-201ENST00000383968 104 ntBASIC0.6□□□□□ -2.31
TRAF3IP3Q9Y228 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.6□□□□□ -2.31
TRAF3IP3Q9Y228 Y_RNA.645-201ENST00000391229 102 ntBASIC0.6□□□□□ -2.31
TRAF3IP3Q9Y228 MIR548J-201ENST00000408833 112 ntBASIC0.6□□□□□ -2.31
TRAF3IP3Q9Y228 AC024067.1-201ENST00000426199 223 ntBASIC0.6□□□□□ -2.31
TRAF3IP3Q9Y228 AC098869.1-201ENST00000481627 292 ntBASIC0.6□□□□□ -2.31
TRAF3IP3Q9Y228 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.6□□□□□ -2.31
TRAF3IP3Q9Y228 RNU4-57P-201ENST00000515980 135 ntBASIC0.6□□□□□ -2.31
TRAF3IP3Q9Y228 RNU4-54P-201ENST00000516428 129 ntBASIC0.6□□□□□ -2.31
TRAF3IP3Q9Y228 Y_RNA.713-201ENST00000517013 96 ntBASIC0.6□□□□□ -2.31
TRAF3IP3Q9Y228 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.6□□□□□ -2.31
TRAF3IP3Q9Y228 AC007742.2-201ENST00000618226 398 ntBASIC0.6□□□□□ -2.31
TRAF3IP3Q9Y228 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
TRAF3IP3Q9Y228 SNORD38C-201ENST00000384381 69 ntBASIC0.59□□□□□ -2.31
TRAF3IP3Q9Y228 RNU6-102P-201ENST00000384485 104 ntBASIC0.59□□□□□ -2.31
TRAF3IP3Q9Y228 Y_RNA.526-201ENST00000384572 110 ntBASIC0.59□□□□□ -2.31
TRAF3IP3Q9Y228 MIR570-201ENST00000384917 97 ntBASIC0.59□□□□□ -2.31
TRAF3IP3Q9Y228 U8.17-201ENST00000391292 132 ntBASIC0.59□□□□□ -2.31
TRAF3IP3Q9Y228 MTND4P19-201ENST00000446659 478 ntBASIC0.59□□□□□ -2.31
TRAF3IP3Q9Y228 HSPE1P25-201ENST00000455484 251 ntBASIC0.59□□□□□ -2.31
TRAF3IP3Q9Y228 Y_RNA.639-201ENST00000458981 102 ntBASIC0.59□□□□□ -2.31
TRAF3IP3Q9Y228 SEPT14P8-201ENST00000508026 178 ntBASIC0.59□□□□□ -2.31
TRAF3IP3Q9Y228 RPL23AP91-201ENST00000569211 455 ntBASIC0.59□□□□□ -2.31
TRAF3IP3Q9Y228 MIR4300-201ENST00000581016 96 ntBASIC0.59□□□□□ -2.31
TRAF3IP3Q9Y228 AL512605.2-201ENST00000592972 256 ntBASIC0.59□□□□□ -2.31
TRAF3IP3Q9Y228 SNORD113-5-201ENST00000607261 78 ntBASIC0.59□□□□□ -2.31
TRAF3IP3Q9Y228 JPX_2.1-201ENST00000614161 69 ntBASIC0.59□□□□□ -2.31
TRAF3IP3Q9Y228 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.59□□□□□ -2.31
TRAF3IP3Q9Y228 RNU6-369P-201ENST00000362515 102 ntBASIC0.58□□□□□ -2.32
TRAF3IP3Q9Y228 Y_RNA.31-201ENST00000362574 102 ntBASIC0.58□□□□□ -2.32
TRAF3IP3Q9Y228 Y_RNA.136-201ENST00000363444 102 ntBASIC0.58□□□□□ -2.32
TRAF3IP3Q9Y228 RNA5SP499-201ENST00000363982 119 ntBASIC0.58□□□□□ -2.32
TRAF3IP3Q9Y228 RNU6-21P-201ENST00000384710 107 ntBASIC0.58□□□□□ -2.32
TRAF3IP3Q9Y228 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.58□□□□□ -2.32
TRAF3IP3Q9Y228 SNORD111-201ENST00000408139 94 ntBASIC0.58□□□□□ -2.32
TRAF3IP3Q9Y228 RNU6-613P-201ENST00000410412 108 ntBASIC0.58□□□□□ -2.32
TRAF3IP3Q9Y228 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.58□□□□□ -2.32
TRAF3IP3Q9Y228 RNU6-1110P-201ENST00000516462 101 ntBASIC0.58□□□□□ -2.32
TRAF3IP3Q9Y228 Y_RNA.715-201ENST00000517082 110 ntBASIC0.58□□□□□ -2.32
TRAF3IP3Q9Y228 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.58□□□□□ -2.32
TRAF3IP3Q9Y228 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
TRAF3IP3Q9Y228 SNORD113.3-201ENST00000364630 78 ntBASIC0.57□□□□□ -2.32
TRAF3IP3Q9Y228 MIR499A-201ENST00000384903 122 ntBASIC0.57□□□□□ -2.32
TRAF3IP3Q9Y228 SNORD89-201ENST00000390981 114 ntBASIC0.57□□□□□ -2.32
TRAF3IP3Q9Y228 SNORD115-46-201ENST00000390982 71 ntBASIC0.57□□□□□ -2.32
TRAF3IP3Q9Y228 MTCO2P33-201ENST00000402100 465 ntBASIC0.57□□□□□ -2.32
TRAF3IP3Q9Y228 RNA5SP95-201ENST00000410319 137 ntBASIC0.57□□□□□ -2.32
TRAF3IP3Q9Y228 PMCHL1-202ENST00000423102 261 ntBASIC0.57□□□□□ -2.32
TRAF3IP3Q9Y228 POLR2KP2-201ENST00000438155 177 ntBASIC0.57□□□□□ -2.32
TRAF3IP3Q9Y228 RNU6-496P-201ENST00000516145 99 ntBASIC0.57□□□□□ -2.32
TRAF3IP3Q9Y228 RNU6-764P-201ENST00000516396 105 ntBASIC0.57□□□□□ -2.32
TRAF3IP3Q9Y228 RNU7-181P-201ENST00000517234 74 ntBASIC0.57□□□□□ -2.32
TRAF3IP3Q9Y228 MIR548AO-201ENST00000579992 96 ntBASIC0.57□□□□□ -2.32
TRAF3IP3Q9Y228 MIR2681-201ENST00000581814 105 ntBASIC0.57□□□□□ -2.32
TRAF3IP3Q9Y228 AL021707.8-201ENST00000609428 183 ntBASIC0.57□□□□□ -2.32
TRAF3IP3Q9Y228 AC022140.2-201ENST00000623500 188 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 243.5 ms