Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 Y_RNA.387-201ENST00000383918 102 ntBASIC0.43□□□□□ -2.34
RPH3ALQ9UNE2 Y_RNA.462-201ENST00000384268 102 ntBASIC0.43□□□□□ -2.34
RPH3ALQ9UNE2 Y_RNA.463-201ENST00000384271 102 ntBASIC0.43□□□□□ -2.34
RPH3ALQ9UNE2 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.43□□□□□ -2.34
RPH3ALQ9UNE2 RNU4-30P-201ENST00000410245 143 ntBASIC0.43□□□□□ -2.34
RPH3ALQ9UNE2 AC098614.3-201ENST00000438957 440 ntBASIC0.43□□□□□ -2.34
RPH3ALQ9UNE2 AL157398.1-201ENST00000452981 186 ntBASIC0.43□□□□□ -2.34
RPH3ALQ9UNE2 snoU13.21-201ENST00000459368 105 ntBASIC0.43□□□□□ -2.34
RPH3ALQ9UNE2 SNORD116.3-201ENST00000517176 78 ntBASIC0.43□□□□□ -2.34
RPH3ALQ9UNE2 RPL23AP91-201ENST00000569211 455 ntBASIC0.43□□□□□ -2.34
RPH3ALQ9UNE2 MIR4791-201ENST00000607666 84 ntBASIC0.43□□□□□ -2.34
RPH3ALQ9UNE2 RNU6-369P-201ENST00000362515 102 ntBASIC0.42□□□□□ -2.34
RPH3ALQ9UNE2 RNU6-1048P-201ENST00000364054 107 ntBASIC0.42□□□□□ -2.34
RPH3ALQ9UNE2 Y_RNA.458-201ENST00000384240 102 ntBASIC0.42□□□□□ -2.34
RPH3ALQ9UNE2 Y_RNA.537-201ENST00000384626 109 ntBASIC0.42□□□□□ -2.34
RPH3ALQ9UNE2 RNU6-205P-201ENST00000390858 107 ntBASIC0.42□□□□□ -2.34
RPH3ALQ9UNE2 Y_RNA.619-201ENST00000410951 90 ntBASIC0.42□□□□□ -2.34
RPH3ALQ9UNE2 RNU6-437P-201ENST00000459408 95 ntBASIC0.42□□□□□ -2.34
RPH3ALQ9UNE2 Y_RNA.718-201ENST00000517110 102 ntBASIC0.42□□□□□ -2.34
RPH3ALQ9UNE2 AL080274.1-201ENST00000605565 220 ntBASIC0.42□□□□□ -2.34
RPH3ALQ9UNE2 AC022709.1-201ENST00000615967 87 ntBASIC0.42□□□□□ -2.34
RPH3ALQ9UNE2 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
RPH3ALQ9UNE2 SNORD18A-201ENST00000363753 72 ntBASIC0.41□□□□□ -2.34
RPH3ALQ9UNE2 SNORD45.3-201ENST00000363836 72 ntBASIC0.41□□□□□ -2.34
RPH3ALQ9UNE2 RNY1-201ENST00000364228 113 ntBASIC0.41□□□□□ -2.34
RPH3ALQ9UNE2 RNU1-133P-201ENST00000364867 167 ntBASIC0.41□□□□□ -2.34
RPH3ALQ9UNE2 AL603910.2-201ENST00000407268 136 ntBASIC0.41□□□□□ -2.34
RPH3ALQ9UNE2 SNORA36B-201ENST00000410438 131 ntBASIC0.41□□□□□ -2.34
RPH3ALQ9UNE2 MTND1P14-201ENST00000427400 950 ntBASIC0.41□□□□□ -2.34
RPH3ALQ9UNE2 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.41□□□□□ -2.34
RPH3ALQ9UNE2 RNU6-277P-201ENST00000516272 106 ntBASIC0.41□□□□□ -2.34
RPH3ALQ9UNE2 MIR2681-201ENST00000581814 105 ntBASIC0.41□□□□□ -2.34
RPH3ALQ9UNE2 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.41□□□□□ -2.34
RPH3ALQ9UNE2 AC084781.2-201ENST00000615568 161 ntBASIC0.41□□□□□ -2.34
RPH3ALQ9UNE2 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.4□□□□□ -2.35
RPH3ALQ9UNE2 RNA5SP347-201ENST00000362445 119 ntBASIC0.4□□□□□ -2.35
RPH3ALQ9UNE2 RNU6-937P-201ENST00000384325 106 ntBASIC0.4□□□□□ -2.35
RPH3ALQ9UNE2 Y_RNA.496-201ENST00000384444 101 ntBASIC0.4□□□□□ -2.35
RPH3ALQ9UNE2 MIR573-201ENST00000384964 99 ntBASIC0.4□□□□□ -2.35
RPH3ALQ9UNE2 MIR140-201ENST00000385282 100 ntBASIC0.4□□□□□ -2.35
RPH3ALQ9UNE2 RNU2-14P-201ENST00000411053 191 ntBASIC0.4□□□□□ -2.35
RPH3ALQ9UNE2 SNORD83.1-201ENST00000411362 77 ntBASIC0.4□□□□□ -2.35
RPH3ALQ9UNE2 AC015818.7-201ENST00000428754 109 ntBASIC0.4□□□□□ -2.35
RPH3ALQ9UNE2 AC087499.7-201ENST00000441958 109 ntBASIC0.4□□□□□ -2.35
RPH3ALQ9UNE2 RNU7-141P-201ENST00000459304 62 ntBASIC0.4□□□□□ -2.35
RPH3ALQ9UNE2 RPS29P30-201ENST00000600975 111 ntBASIC0.4□□□□□ -2.35
RPH3ALQ9UNE2 AC104985.2-201ENST00000620598 500 ntBASIC0.4□□□□□ -2.35
RPH3ALQ9UNE2 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
RPH3ALQ9UNE2 Y_RNA.142-201ENST00000363491 102 ntBASIC0.39□□□□□ -2.35
RPH3ALQ9UNE2 RNU6-934P-201ENST00000365154 107 ntBASIC0.39□□□□□ -2.35
RPH3ALQ9UNE2 SNORA1.2-201ENST00000365189 134 ntBASIC0.39□□□□□ -2.35
RPH3ALQ9UNE2 Y_RNA.376-201ENST00000365638 108 ntBASIC0.39□□□□□ -2.35
RPH3ALQ9UNE2 Y_RNA.384-201ENST00000383909 102 ntBASIC0.39□□□□□ -2.35
RPH3ALQ9UNE2 RNU6-21P-201ENST00000384710 107 ntBASIC0.39□□□□□ -2.35
RPH3ALQ9UNE2 MIR520F-201ENST00000384824 87 ntBASIC0.39□□□□□ -2.35
RPH3ALQ9UNE2 MIR598-201ENST00000384868 97 ntBASIC0.39□□□□□ -2.35
RPH3ALQ9UNE2 MIR520H-201ENST00000385126 88 ntBASIC0.39□□□□□ -2.35
RPH3ALQ9UNE2 RNU6-177P-201ENST00000411257 104 ntBASIC0.39□□□□□ -2.35
RPH3ALQ9UNE2 RNU6-1132P-201ENST00000459214 107 ntBASIC0.39□□□□□ -2.35
RPH3ALQ9UNE2 AC010655.3-201ENST00000478818 450 ntBASIC0.39□□□□□ -2.35
RPH3ALQ9UNE2 SCARNA8-201ENST00000515924 131 ntBASIC0.39□□□□□ -2.35
RPH3ALQ9UNE2 RNU4-57P-201ENST00000515980 135 ntBASIC0.39□□□□□ -2.35
RPH3ALQ9UNE2 RNU6-977P-201ENST00000516411 103 ntBASIC0.39□□□□□ -2.35
RPH3ALQ9UNE2 SNORA20.3-201ENST00000516880 132 ntBASIC0.39□□□□□ -2.35
RPH3ALQ9UNE2 AC092447.9-201ENST00000603395 144 ntBASIC0.39□□□□□ -2.35
RPH3ALQ9UNE2 AP000753.3-201ENST00000604083 169 ntBASIC0.39□□□□□ -2.35
RPH3ALQ9UNE2 AC006441.5-201ENST00000612680 209 ntBASIC0.39□□□□□ -2.35
RPH3ALQ9UNE2 MIR5087-201ENST00000635826 76 ntBASIC0.39□□□□□ -2.35
RPH3ALQ9UNE2 MIR1302-1-201ENST00000637932 143 ntBASIC0.39□□□□□ -2.35
RPH3ALQ9UNE2 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
RPH3ALQ9UNE2 RNU6-580P-201ENST00000365159 107 ntBASIC0.38□□□□□ -2.35
RPH3ALQ9UNE2 Y_RNA.354-201ENST00000365448 111 ntBASIC0.38□□□□□ -2.35
RPH3ALQ9UNE2 RNU6-125P-201ENST00000384505 107 ntBASIC0.38□□□□□ -2.35
RPH3ALQ9UNE2 Y_RNA.551-201ENST00000384661 102 ntBASIC0.38□□□□□ -2.35
RPH3ALQ9UNE2 MIR489-201ENST00000384923 84 ntBASIC0.38□□□□□ -2.35
RPH3ALQ9UNE2 MT-TN-201ENST00000387400 73 ntBASIC0.38□□□□□ -2.35
RPH3ALQ9UNE2 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.38□□□□□ -2.35
RPH3ALQ9UNE2 RNU6-847P-201ENST00000411115 108 ntBASIC0.38□□□□□ -2.35
RPH3ALQ9UNE2 AC138393.2-201ENST00000414742 246 ntBASIC0.38□□□□□ -2.35
RPH3ALQ9UNE2 MTCO2P12-201ENST00000427426 682 ntBASIC0.38□□□□□ -2.35
RPH3ALQ9UNE2 SNORD11-201ENST00000459124 84 ntBASIC0.38□□□□□ -2.35
RPH3ALQ9UNE2 Y_RNA.661-201ENST00000516003 99 ntBASIC0.38□□□□□ -2.35
RPH3ALQ9UNE2 RN7SKP12-201ENST00000516275 143 ntBASIC0.38□□□□□ -2.35
RPH3ALQ9UNE2 AC005357.1-201ENST00000588399 301 ntBASIC0.38□□□□□ -2.35
RPH3ALQ9UNE2 AL121655.1-201ENST00000605811 308 ntBASIC0.38□□□□□ -2.35
RPH3ALQ9UNE2 AC243994.1-201ENST00000618627 109 ntBASIC0.38□□□□□ -2.35
RPH3ALQ9UNE2 MIR377-201ENST00000362145 69 ntBASIC0.37□□□□□ -2.35
RPH3ALQ9UNE2 RNU4-80P-201ENST00000363200 141 ntBASIC0.37□□□□□ -2.35
RPH3ALQ9UNE2 Y_RNA.143-201ENST00000363520 106 ntBASIC0.37□□□□□ -2.35
RPH3ALQ9UNE2 RNU6-674P-201ENST00000363831 107 ntBASIC0.37□□□□□ -2.35
RPH3ALQ9UNE2 RNU4-50P-201ENST00000364361 141 ntBASIC0.37□□□□□ -2.35
RPH3ALQ9UNE2 Y_RNA.383-201ENST00000383855 97 ntBASIC0.37□□□□□ -2.35
RPH3ALQ9UNE2 Y_RNA.439-201ENST00000384119 94 ntBASIC0.37□□□□□ -2.35
RPH3ALQ9UNE2 MIR613-201ENST00000385248 95 ntBASIC0.37□□□□□ -2.35
RPH3ALQ9UNE2 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.37□□□□□ -2.35
RPH3ALQ9UNE2 SNORA68.3-201ENST00000515906 83 ntBASIC0.37□□□□□ -2.35
RPH3ALQ9UNE2 RNU6-1007P-201ENST00000516586 107 ntBASIC0.37□□□□□ -2.35
RPH3ALQ9UNE2 RNU6-229P-201ENST00000516614 102 ntBASIC0.37□□□□□ -2.35
RPH3ALQ9UNE2 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.37□□□□□ -2.35
RPH3ALQ9UNE2 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms