Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 AC005357.1-201ENST00000588399 301 ntBASIC1.25□□□□□ -2.21
GTF3C4Q9UKN8 AL022345.2-201ENST00000606307 135 ntBASIC1.25□□□□□ -2.21
GTF3C4Q9UKN8 MIRLET7C-201ENST00000362160 84 ntBASIC1.24□□□□□ -2.21
GTF3C4Q9UKN8 SNORA25.1-201ENST00000362326 128 ntBASIC1.24□□□□□ -2.21
GTF3C4Q9UKN8 RNU6-1272P-201ENST00000362776 107 ntBASIC1.24□□□□□ -2.21
GTF3C4Q9UKN8 Y_RNA.307-201ENST00000365022 117 ntBASIC1.24□□□□□ -2.21
GTF3C4Q9UKN8 RNU6-326P-201ENST00000365480 107 ntBASIC1.24□□□□□ -2.21
GTF3C4Q9UKN8 RNU6-1289P-201ENST00000384431 106 ntBASIC1.24□□□□□ -2.21
GTF3C4Q9UKN8 Y_RNA.539-201ENST00000384635 107 ntBASIC1.24□□□□□ -2.21
GTF3C4Q9UKN8 MIR222-201ENST00000384992 110 ntBASIC1.24□□□□□ -2.21
GTF3C4Q9UKN8 MIR653-201ENST00000385279 96 ntBASIC1.24□□□□□ -2.21
GTF3C4Q9UKN8 RNA5SP482-201ENST00000391269 118 ntBASIC1.24□□□□□ -2.21
GTF3C4Q9UKN8 Y_RNA.621-201ENST00000411065 96 ntBASIC1.24□□□□□ -2.21
GTF3C4Q9UKN8 AL591704.2-201ENST00000421658 181 ntBASIC1.24□□□□□ -2.21
GTF3C4Q9UKN8 SNRPGP10-201ENST00000432323 225 ntBASIC1.24□□□□□ -2.21
GTF3C4Q9UKN8 RNU7-12P-201ENST00000516030 62 ntBASIC1.24□□□□□ -2.21
GTF3C4Q9UKN8 SNORA70.12-201ENST00000516084 153 ntBASIC1.24□□□□□ -2.21
GTF3C4Q9UKN8 SNORD116-28-201ENST00000516123 91 ntBASIC1.24□□□□□ -2.21
GTF3C4Q9UKN8 RNU7-115P-201ENST00000516433 55 ntBASIC1.24□□□□□ -2.21
GTF3C4Q9UKN8 SNORA70.22-201ENST00000517160 124 ntBASIC1.24□□□□□ -2.21
GTF3C4Q9UKN8 AC136628.3-201ENST00000521868 290 ntBASIC1.24□□□□□ -2.21
GTF3C4Q9UKN8 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.24□□□□□ -2.21
GTF3C4Q9UKN8 AC090049.2-201ENST00000550377 109 ntBASIC1.24□□□□□ -2.21
GTF3C4Q9UKN8 MIR3128-201ENST00000581957 66 ntBASIC1.24□□□□□ -2.21
GTF3C4Q9UKN8 POLR3GP1-201ENST00000594073 261 ntBASIC1.24□□□□□ -2.21
GTF3C4Q9UKN8 HSPE1P19-201ENST00000603327 295 ntBASIC1.24□□□□□ -2.21
GTF3C4Q9UKN8 AC005972.2-201ENST00000604690 348 ntBASIC1.24□□□□□ -2.21
GTF3C4Q9UKN8 AL591926.4-201ENST00000616895 298 ntBASIC1.24□□□□□ -2.21
GTF3C4Q9UKN8 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.24□□□□□ -2.21
GTF3C4Q9UKN8 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.24□□□□□ -2.21
GTF3C4Q9UKN8 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
GTF3C4Q9UKN8 Y_RNA.14-201ENST00000362415 103 ntBASIC1.23□□□□□ -2.21
GTF3C4Q9UKN8 SNORD114-7-201ENST00000362520 77 ntBASIC1.23□□□□□ -2.21
GTF3C4Q9UKN8 Y_RNA.54-201ENST00000362766 105 ntBASIC1.23□□□□□ -2.21
GTF3C4Q9UKN8 Y_RNA.60-201ENST00000362831 98 ntBASIC1.23□□□□□ -2.21
GTF3C4Q9UKN8 Y_RNA.456-201ENST00000384232 111 ntBASIC1.23□□□□□ -2.21
GTF3C4Q9UKN8 RNU6-196P-201ENST00000384315 107 ntBASIC1.23□□□□□ -2.21
GTF3C4Q9UKN8 Y_RNA.518-201ENST00000384552 113 ntBASIC1.23□□□□□ -2.21
GTF3C4Q9UKN8 MIR520G-201ENST00000385064 90 ntBASIC1.23□□□□□ -2.21
GTF3C4Q9UKN8 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
GTF3C4Q9UKN8 AL451046.2-201ENST00000403074 277 ntBASIC1.23□□□□□ -2.21
GTF3C4Q9UKN8 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.23□□□□□ -2.21
GTF3C4Q9UKN8 RNU6-1132P-201ENST00000459214 107 ntBASIC1.23□□□□□ -2.21
GTF3C4Q9UKN8 OR2A41P-201ENST00000473586 105 ntBASIC1.23□□□□□ -2.21
GTF3C4Q9UKN8 RNU6-1143P-201ENST00000516125 104 ntBASIC1.23□□□□□ -2.21
GTF3C4Q9UKN8 RNY3P16-201ENST00000516338 101 ntBASIC1.23□□□□□ -2.21
GTF3C4Q9UKN8 SNORA27.4-201ENST00000516650 95 ntBASIC1.23□□□□□ -2.21
GTF3C4Q9UKN8 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
GTF3C4Q9UKN8 MIR548AY-201ENST00000617669 107 ntBASIC1.23□□□□□ -2.21
GTF3C4Q9UKN8 AC027335.2-201ENST00000624030 375 ntBASIC1.23□□□□□ -2.21
GTF3C4Q9UKN8 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
GTF3C4Q9UKN8 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
GTF3C4Q9UKN8 SNORD27-201ENST00000363981 72 ntBASIC1.22□□□□□ -2.21
GTF3C4Q9UKN8 Y_RNA.253-201ENST00000364562 112 ntBASIC1.22□□□□□ -2.21
GTF3C4Q9UKN8 Y_RNA.275-201ENST00000364726 110 ntBASIC1.22□□□□□ -2.21
GTF3C4Q9UKN8 SNORA2.2-201ENST00000365473 135 ntBASIC1.22□□□□□ -2.21
GTF3C4Q9UKN8 RNU6-211P-201ENST00000384047 107 ntBASIC1.22□□□□□ -2.21
GTF3C4Q9UKN8 RNA5SP247-201ENST00000411181 105 ntBASIC1.22□□□□□ -2.21
GTF3C4Q9UKN8 PIGPP3-201ENST00000425307 415 ntBASIC1.22□□□□□ -2.21
GTF3C4Q9UKN8 AL049830.1-201ENST00000468034 425 ntBASIC1.22□□□□□ -2.21
GTF3C4Q9UKN8 SNORA31.4-201ENST00000516049 129 ntBASIC1.22□□□□□ -2.21
GTF3C4Q9UKN8 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.22□□□□□ -2.21
GTF3C4Q9UKN8 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.22□□□□□ -2.21
GTF3C4Q9UKN8 MIR3149-201ENST00000584629 83 ntBASIC1.22□□□□□ -2.21
GTF3C4Q9UKN8 AL512605.2-201ENST00000592972 256 ntBASIC1.22□□□□□ -2.21
GTF3C4Q9UKN8 AP003357.1-201ENST00000604497 148 ntBASIC1.22□□□□□ -2.21
GTF3C4Q9UKN8 AC011921.3-201ENST00000605540 361 ntBASIC1.22□□□□□ -2.21
GTF3C4Q9UKN8 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.22□□□□□ -2.21
GTF3C4Q9UKN8 U2.14-201ENST00000615943 113 ntBASIC1.22□□□□□ -2.21
GTF3C4Q9UKN8 AC012676.2-201ENST00000619258 186 ntBASIC1.22□□□□□ -2.21
GTF3C4Q9UKN8 7SK.10-201ENST00000621414 298 ntBASIC1.22□□□□□ -2.21
GTF3C4Q9UKN8 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.22□□□□□ -2.21
GTF3C4Q9UKN8 Y_RNA.44-201ENST00000362676 108 ntBASIC1.21□□□□□ -2.22
GTF3C4Q9UKN8 RNU6-463P-201ENST00000384340 107 ntBASIC1.21□□□□□ -2.22
GTF3C4Q9UKN8 MIR1285-1-201ENST00000408593 84 ntBASIC1.21□□□□□ -2.22
GTF3C4Q9UKN8 SNORA36B-201ENST00000410438 131 ntBASIC1.21□□□□□ -2.22
GTF3C4Q9UKN8 MLLT10P1-201ENST00000418346 262 ntBASIC1.21□□□□□ -2.22
GTF3C4Q9UKN8 MRPL35P3-201ENST00000421557 364 ntBASIC1.21□□□□□ -2.22
GTF3C4Q9UKN8 MTND4LP30-201ENST00000454092 297 ntBASIC1.21□□□□□ -2.22
GTF3C4Q9UKN8 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.21□□□□□ -2.22
GTF3C4Q9UKN8 COX6CP14-201ENST00000469580 174 ntBASIC1.21□□□□□ -2.22
GTF3C4Q9UKN8 RPL23AP54-201ENST00000495129 419 ntBASIC1.21□□□□□ -2.22
GTF3C4Q9UKN8 SNORA31.2-201ENST00000516019 134 ntBASIC1.21□□□□□ -2.22
GTF3C4Q9UKN8 RNU6-947P-201ENST00000516264 106 ntBASIC1.21□□□□□ -2.22
GTF3C4Q9UKN8 AL358944.1-201ENST00000528537 144 ntBASIC1.21□□□□□ -2.22
GTF3C4Q9UKN8 AC127455.1-201ENST00000565496 145 ntBASIC1.21□□□□□ -2.22
GTF3C4Q9UKN8 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.21□□□□□ -2.22
GTF3C4Q9UKN8 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
GTF3C4Q9UKN8 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.2□□□□□ -2.22
GTF3C4Q9UKN8 UBE2WP1-201ENST00000362030 340 ntBASIC1.2□□□□□ -2.22
GTF3C4Q9UKN8 SNORD68-201ENST00000363214 84 ntBASIC1.2□□□□□ -2.22
GTF3C4Q9UKN8 Y_RNA.796-201ENST00000364268 102 ntBASIC1.2□□□□□ -2.22
GTF3C4Q9UKN8 Y_RNA.269-201ENST00000364685 89 ntBASIC1.2□□□□□ -2.22
GTF3C4Q9UKN8 Y_RNA.799-201ENST00000364992 102 ntBASIC1.2□□□□□ -2.22
GTF3C4Q9UKN8 RNU6-1323P-201ENST00000384025 107 ntBASIC1.2□□□□□ -2.22
GTF3C4Q9UKN8 Y_RNA.447-201ENST00000384184 113 ntBASIC1.2□□□□□ -2.22
GTF3C4Q9UKN8 Y_RNA.452-201ENST00000384202 108 ntBASIC1.2□□□□□ -2.22
GTF3C4Q9UKN8 Y_RNA.562-201ENST00000384695 113 ntBASIC1.2□□□□□ -2.22
GTF3C4Q9UKN8 SNORA53-201ENST00000391141 249 ntBASIC1.2□□□□□ -2.22
GTF3C4Q9UKN8 RNU6-1054P-201ENST00000411293 104 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 212.9 ms