Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 AC104435.1-201ENST00000483483 166 ntBASIC2.61□□□□□ -1.99
DDX41Q9UJV9 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.61□□□□□ -1.99
DDX41Q9UJV9 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.61□□□□□ -1.99
DDX41Q9UJV9 SNORA16B-201ENST00000364674 135 ntBASIC2.6□□□□□ -1.99
DDX41Q9UJV9 RNU4-11P-201ENST00000365287 132 ntBASIC2.6□□□□□ -1.99
DDX41Q9UJV9 RNU6-360P-201ENST00000390944 104 ntBASIC2.6□□□□□ -1.99
DDX41Q9UJV9 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.6□□□□□ -1.99
DDX41Q9UJV9 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.6□□□□□ -1.99
DDX41Q9UJV9 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.6□□□□□ -1.99
DDX41Q9UJV9 RNA5SP276-201ENST00000362580 94 ntBASIC2.59□□□□□ -1.99
DDX41Q9UJV9 Y_RNA.215-201ENST00000364204 112 ntBASIC2.59□□□□□ -1.99
DDX41Q9UJV9 SNORD24-201ENST00000383884 75 ntBASIC2.59□□□□□ -1.99
DDX41Q9UJV9 RNU6-768P-201ENST00000384683 107 ntBASIC2.59□□□□□ -1.99
DDX41Q9UJV9 SNORA75.5-201ENST00000391291 81 ntBASIC2.59□□□□□ -1.99
DDX41Q9UJV9 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.59□□□□□ -1.99
DDX41Q9UJV9 SNRPGP13-201ENST00000442212 177 ntBASIC2.59□□□□□ -1.99
DDX41Q9UJV9 SCARNA16.3-201ENST00000516595 184 ntBASIC2.59□□□□□ -1.99
DDX41Q9UJV9 SNORA31.17-201ENST00000516953 127 ntBASIC2.59□□□□□ -1.99
DDX41Q9UJV9 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.59□□□□□ -1.99
DDX41Q9UJV9 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.59□□□□□ -2
DDX41Q9UJV9 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
DDX41Q9UJV9 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.58□□□□□ -2
DDX41Q9UJV9 SNORA6-201ENST00000384033 151 ntBASIC2.58□□□□□ -2
DDX41Q9UJV9 MIR613-201ENST00000385248 95 ntBASIC2.58□□□□□ -2
DDX41Q9UJV9 MIR1289-2-201ENST00000408360 111 ntBASIC2.58□□□□□ -2
DDX41Q9UJV9 HMGN2P38-201ENST00000423806 265 ntBASIC2.58□□□□□ -2
DDX41Q9UJV9 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.58□□□□□ -2
DDX41Q9UJV9 snoU13.23-201ENST00000458863 104 ntBASIC2.58□□□□□ -2
DDX41Q9UJV9 AC114811.1-201ENST00000507207 168 ntBASIC2.58□□□□□ -2
DDX41Q9UJV9 RNU6-346P-201ENST00000516288 111 ntBASIC2.58□□□□□ -2
DDX41Q9UJV9 RNA5SP168-201ENST00000516642 112 ntBASIC2.58□□□□□ -2
DDX41Q9UJV9 MIR4287-201ENST00000579398 78 ntBASIC2.58□□□□□ -2
DDX41Q9UJV9 MIR548X2-201ENST00000579776 100 ntBASIC2.58□□□□□ -2
DDX41Q9UJV9 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.58□□□□□ -2
DDX41Q9UJV9 AL596028.1-201ENST00000326971 197 ntBASIC2.57□□□□□ -2
DDX41Q9UJV9 RNU6-424P-201ENST00000384367 105 ntBASIC2.57□□□□□ -2
DDX41Q9UJV9 SNORD38C-201ENST00000384381 69 ntBASIC2.57□□□□□ -2
DDX41Q9UJV9 MIR764-201ENST00000390811 85 ntBASIC2.57□□□□□ -2
DDX41Q9UJV9 U8.16-201ENST00000391279 133 ntBASIC2.57□□□□□ -2
DDX41Q9UJV9 MIR891A-201ENST00000401237 79 ntBASIC2.57□□□□□ -2
DDX41Q9UJV9 CALM2P4-201ENST00000430810 426 ntBASIC2.57□□□□□ -2
DDX41Q9UJV9 AC090255.1-201ENST00000495779 349 ntBASIC2.57□□□□□ -2
DDX41Q9UJV9 RNU7-12P-201ENST00000516030 62 ntBASIC2.57□□□□□ -2
DDX41Q9UJV9 AC090142.3-201ENST00000519012 385 ntBASIC2.57□□□□□ -2
DDX41Q9UJV9 AC112693.2-201ENST00000556538 232 ntBASIC2.57□□□□□ -2
DDX41Q9UJV9 DEFB122-202ENST00000569013 197 ntBASIC2.57□□□□□ -2
DDX41Q9UJV9 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.57□□□□□ -2
DDX41Q9UJV9 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.57□□□□□ -2
DDX41Q9UJV9 MIR3658-201ENST00000636291 56 ntBASIC2.57□□□□□ -2
DDX41Q9UJV9 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
DDX41Q9UJV9 MIRLET7G-201ENST00000362280 84 ntBASIC2.56□□□□□ -2
DDX41Q9UJV9 RNU6-833P-201ENST00000363486 107 ntBASIC2.56□□□□□ -2
DDX41Q9UJV9 RNU6-978P-201ENST00000364371 103 ntBASIC2.56□□□□□ -2
DDX41Q9UJV9 RNU6-187P-201ENST00000384139 106 ntBASIC2.56□□□□□ -2
DDX41Q9UJV9 RNU6-693P-201ENST00000516134 107 ntBASIC2.56□□□□□ -2
DDX41Q9UJV9 Y_RNA.666-201ENST00000516187 112 ntBASIC2.56□□□□□ -2
DDX41Q9UJV9 RNU6-789P-201ENST00000517105 102 ntBASIC2.56□□□□□ -2
DDX41Q9UJV9 AP001485.1-201ENST00000604799 199 ntBASIC2.56□□□□□ -2
DDX41Q9UJV9 AC006441.5-201ENST00000612680 209 ntBASIC2.56□□□□□ -2
DDX41Q9UJV9 AL513423.1-201ENST00000621695 132 ntBASIC2.56□□□□□ -2
DDX41Q9UJV9 AC092881.1-201ENST00000638218 2733 ntBASIC2.56□□□□□ -2
DDX41Q9UJV9 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
DDX41Q9UJV9 MIRLET7C-201ENST00000362160 84 ntBASIC2.55□□□□□ -2
DDX41Q9UJV9 SNORD50.2-201ENST00000365465 70 ntBASIC2.55□□□□□ -2
DDX41Q9UJV9 PGBD4P5-201ENST00000445958 426 ntBASIC2.55□□□□□ -2
DDX41Q9UJV9 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.55□□□□□ -2
DDX41Q9UJV9 AC021506.2-201ENST00000612354 169 ntBASIC2.55□□□□□ -2
DDX41Q9UJV9 MIR6873-201ENST00000622788 63 ntBASIC2.55□□□□□ -2
DDX41Q9UJV9 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
DDX41Q9UJV9 ICE2P2-201ENST00000483823 2787 ntBASIC2.54□□□□□ -2
DDX41Q9UJV9 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.54□□□□□ -2
DDX41Q9UJV9 Y_RNA.66-201ENST00000362862 102 ntBASIC2.54□□□□□ -2
DDX41Q9UJV9 RNA5SP37-201ENST00000365420 130 ntBASIC2.54□□□□□ -2
DDX41Q9UJV9 SNORD61-201ENST00000384252 73 ntBASIC2.54□□□□□ -2
DDX41Q9UJV9 MIR221-201ENST00000385135 110 ntBASIC2.54□□□□□ -2
DDX41Q9UJV9 TMSB4XP3-201ENST00000445144 114 ntBASIC2.54□□□□□ -2
DDX41Q9UJV9 RPL23AP6-201ENST00000446637 472 ntBASIC2.54□□□□□ -2
DDX41Q9UJV9 SNORA18.4-201ENST00000516440 124 ntBASIC2.54□□□□□ -2
DDX41Q9UJV9 RNU6-1116P-201ENST00000517269 99 ntBASIC2.54□□□□□ -2
DDX41Q9UJV9 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.54□□□□□ -2
DDX41Q9UJV9 MIR6840-201ENST00000611937 71 ntBASIC2.54□□□□□ -2
DDX41Q9UJV9 MIR6766-201ENST00000622641 72 ntBASIC2.54□□□□□ -2
DDX41Q9UJV9 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
DDX41Q9UJV9 RNU6-888P-201ENST00000363010 101 ntBASIC2.53□□□□□ -2
DDX41Q9UJV9 RNU6-268P-201ENST00000364174 107 ntBASIC2.53□□□□□ -2
DDX41Q9UJV9 RNU6-818P-201ENST00000364837 108 ntBASIC2.53□□□□□ -2
DDX41Q9UJV9 Y_RNA.542-201ENST00000384641 111 ntBASIC2.53□□□□□ -2
DDX41Q9UJV9 RNA5SP338-201ENST00000410495 85 ntBASIC2.53□□□□□ -2
DDX41Q9UJV9 AC244636.1-201ENST00000421152 228 ntBASIC2.53□□□□□ -2
DDX41Q9UJV9 RNU6-1270P-201ENST00000517128 108 ntBASIC2.53□□□□□ -2
DDX41Q9UJV9 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.53□□□□□ -2
DDX41Q9UJV9 MIR4448-201ENST00000584360 86 ntBASIC2.53□□□□□ -2
DDX41Q9UJV9 AL773524.1-201ENST00000614065 229 ntBASIC2.53□□□□□ -2
DDX41Q9UJV9 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.53□□□□□ -2
DDX41Q9UJV9 RNU6-414P-201ENST00000363705 104 ntBASIC2.52□□□□□ -2.01
DDX41Q9UJV9 MIR548O-201ENST00000408583 114 ntBASIC2.52□□□□□ -2.01
DDX41Q9UJV9 RNU6-588P-201ENST00000410281 105 ntBASIC2.52□□□□□ -2.01
DDX41Q9UJV9 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.52□□□□□ -2.01
DDX41Q9UJV9 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.52□□□□□ -2.01
DDX41Q9UJV9 SNORA25.12-201ENST00000516202 82 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms