Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 RNU6-383P-201ENST00000410864 94 ntBASIC1.74□□□□□ -2.13
LRFN1Q9P244 RNU6-437P-201ENST00000459408 95 ntBASIC1.74□□□□□ -2.13
LRFN1Q9P244 CYCTP-201ENST00000504253 315 ntBASIC1.74□□□□□ -2.13
LRFN1Q9P244 AC100767.1-201ENST00000528178 123 ntBASIC1.74□□□□□ -2.13
LRFN1Q9P244 JPX_2.1-201ENST00000614161 69 ntBASIC1.74□□□□□ -2.13
LRFN1Q9P244 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
LRFN1Q9P244 MIR126-201ENST00000362291 85 ntBASIC1.73□□□□□ -2.13
LRFN1Q9P244 Y_RNA.24-201ENST00000362508 103 ntBASIC1.73□□□□□ -2.13
LRFN1Q9P244 RNU6-969P-201ENST00000383900 105 ntBASIC1.73□□□□□ -2.13
LRFN1Q9P244 SNORA8.3-201ENST00000384679 139 ntBASIC1.73□□□□□ -2.13
LRFN1Q9P244 MIR522-201ENST00000385071 87 ntBASIC1.73□□□□□ -2.13
LRFN1Q9P244 RNU6-493P-201ENST00000391321 108 ntBASIC1.73□□□□□ -2.13
LRFN1Q9P244 SUMO2P12-201ENST00000405924 140 ntBASIC1.73□□□□□ -2.13
LRFN1Q9P244 AL138752.1-201ENST00000452964 351 ntBASIC1.73□□□□□ -2.13
LRFN1Q9P244 Y_RNA.644-201ENST00000459006 113 ntBASIC1.73□□□□□ -2.13
LRFN1Q9P244 RN7SL274P-201ENST00000492268 272 ntBASIC1.73□□□□□ -2.13
LRFN1Q9P244 Y_RNA.674-201ENST00000516362 113 ntBASIC1.73□□□□□ -2.13
LRFN1Q9P244 MIR4781-201ENST00000585250 76 ntBASIC1.73□□□□□ -2.13
LRFN1Q9P244 AC120024.3-201ENST00000603167 156 ntBASIC1.73□□□□□ -2.13
LRFN1Q9P244 Y_RNA.802-201ENST00000614892 130 ntBASIC1.73□□□□□ -2.13
LRFN1Q9P244 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.73□□□□□ -2.13
LRFN1Q9P244 Y_RNA.29-201ENST00000362570 113 ntBASIC1.72□□□□□ -2.13
LRFN1Q9P244 RNU6-833P-201ENST00000363486 107 ntBASIC1.72□□□□□ -2.13
LRFN1Q9P244 RNU6-47P-201ENST00000383866 107 ntBASIC1.72□□□□□ -2.13
LRFN1Q9P244 Y_RNA.785-201ENST00000384290 109 ntBASIC1.72□□□□□ -2.13
LRFN1Q9P244 MIR526A2-201ENST00000390198 65 ntBASIC1.72□□□□□ -2.13
LRFN1Q9P244 MLLT10P1-201ENST00000418346 262 ntBASIC1.72□□□□□ -2.13
LRFN1Q9P244 RNU7-12P-201ENST00000516030 62 ntBASIC1.72□□□□□ -2.13
LRFN1Q9P244 Y_RNA.700-201ENST00000516806 100 ntBASIC1.72□□□□□ -2.13
LRFN1Q9P244 SNORA81.3-201ENST00000517283 198 ntBASIC1.72□□□□□ -2.13
LRFN1Q9P244 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
LRFN1Q9P244 MIR4778-201ENST00000577635 80 ntBASIC1.72□□□□□ -2.13
LRFN1Q9P244 MIR4724-201ENST00000579485 89 ntBASIC1.72□□□□□ -2.13
LRFN1Q9P244 MIR4308-201ENST00000580634 81 ntBASIC1.72□□□□□ -2.13
LRFN1Q9P244 Z83818.1-201ENST00000603584 150 ntBASIC1.72□□□□□ -2.13
LRFN1Q9P244 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.72□□□□□ -2.13
LRFN1Q9P244 RNU6-199P-201ENST00000362954 107 ntBASIC1.71□□□□□ -2.14
LRFN1Q9P244 RNU6-131P-201ENST00000391144 107 ntBASIC1.71□□□□□ -2.14
LRFN1Q9P244 SNORA17.3-201ENST00000391159 129 ntBASIC1.71□□□□□ -2.14
LRFN1Q9P244 RNU6-918P-201ENST00000391219 106 ntBASIC1.71□□□□□ -2.14
LRFN1Q9P244 MIR1278-201ENST00000408753 81 ntBASIC1.71□□□□□ -2.14
LRFN1Q9P244 Y_RNA.793-201ENST00000411222 111 ntBASIC1.71□□□□□ -2.14
LRFN1Q9P244 RNU2-64P-201ENST00000411315 191 ntBASIC1.71□□□□□ -2.14
LRFN1Q9P244 SNRPGP10-201ENST00000432323 225 ntBASIC1.71□□□□□ -2.14
LRFN1Q9P244 AC003989.2-201ENST00000440224 169 ntBASIC1.71□□□□□ -2.14
LRFN1Q9P244 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.71□□□□□ -2.14
LRFN1Q9P244 RNU6-1007P-201ENST00000516586 107 ntBASIC1.71□□□□□ -2.14
LRFN1Q9P244 RNU6-902P-201ENST00000517212 91 ntBASIC1.71□□□□□ -2.14
LRFN1Q9P244 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.71□□□□□ -2.14
LRFN1Q9P244 AL365434.2-201ENST00000607979 234 ntBASIC1.71□□□□□ -2.14
LRFN1Q9P244 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
LRFN1Q9P244 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
LRFN1Q9P244 RNU6-1084P-201ENST00000362498 107 ntBASIC1.7□□□□□ -2.14
LRFN1Q9P244 snoU2_19.4-201ENST00000364329 80 ntBASIC1.7□□□□□ -2.14
LRFN1Q9P244 RNU6-163P-201ENST00000384396 106 ntBASIC1.7□□□□□ -2.14
LRFN1Q9P244 MIR891A-201ENST00000401237 79 ntBASIC1.7□□□□□ -2.14
LRFN1Q9P244 MIR1287-201ENST00000408492 90 ntBASIC1.7□□□□□ -2.14
LRFN1Q9P244 RPS27P16-201ENST00000425758 201 ntBASIC1.7□□□□□ -2.14
LRFN1Q9P244 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.7□□□□□ -2.14
LRFN1Q9P244 AC107393.1-201ENST00000512403 346 ntBASIC1.7□□□□□ -2.14
LRFN1Q9P244 MIR5688-201ENST00000580619 83 ntBASIC1.7□□□□□ -2.14
LRFN1Q9P244 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.7□□□□□ -2.14
LRFN1Q9P244 AC004792.1-201ENST00000614523 137 ntBASIC1.7□□□□□ -2.14
LRFN1Q9P244 MIR7111-201ENST00000619751 72 ntBASIC1.7□□□□□ -2.14
LRFN1Q9P244 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.69□□□□□ -2.14
LRFN1Q9P244 MIR378A-201ENST00000362177 66 ntBASIC1.69□□□□□ -2.14
LRFN1Q9P244 MIR367-201ENST00000362299 68 ntBASIC1.69□□□□□ -2.14
LRFN1Q9P244 RNU6-1020P-201ENST00000363684 107 ntBASIC1.69□□□□□ -2.14
LRFN1Q9P244 Y_RNA.796-201ENST00000364268 102 ntBASIC1.69□□□□□ -2.14
LRFN1Q9P244 Y_RNA.799-201ENST00000364992 102 ntBASIC1.69□□□□□ -2.14
LRFN1Q9P244 RNU6-1065P-201ENST00000384513 106 ntBASIC1.69□□□□□ -2.14
LRFN1Q9P244 MIR653-201ENST00000385279 96 ntBASIC1.69□□□□□ -2.14
LRFN1Q9P244 MT-TR-201ENST00000387439 65 ntBASIC1.69□□□□□ -2.14
LRFN1Q9P244 RNU6-381P-201ENST00000391259 108 ntBASIC1.69□□□□□ -2.14
LRFN1Q9P244 SNX2P2-201ENST00000424553 323 ntBASIC1.69□□□□□ -2.14
LRFN1Q9P244 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.69□□□□□ -2.14
LRFN1Q9P244 AC023449.1-201ENST00000454464 154 ntBASIC1.69□□□□□ -2.14
LRFN1Q9P244 SNORD13-201ENST00000459299 104 ntBASIC1.69□□□□□ -2.14
LRFN1Q9P244 SCARNA8-201ENST00000515924 131 ntBASIC1.69□□□□□ -2.14
LRFN1Q9P244 RNU6-250P-201ENST00000516958 103 ntBASIC1.69□□□□□ -2.14
LRFN1Q9P244 RNU6-182P-201ENST00000516970 105 ntBASIC1.69□□□□□ -2.14
LRFN1Q9P244 RNU6-1116P-201ENST00000517269 99 ntBASIC1.69□□□□□ -2.14
LRFN1Q9P244 AC019176.1-201ENST00000518519 225 ntBASIC1.69□□□□□ -2.14
LRFN1Q9P244 AC022559.1-201ENST00000520905 205 ntBASIC1.69□□□□□ -2.14
LRFN1Q9P244 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.69□□□□□ -2.14
LRFN1Q9P244 MIR3937-201ENST00000580135 106 ntBASIC1.69□□□□□ -2.14
LRFN1Q9P244 snoU13.31-201ENST00000607291 104 ntBASIC1.69□□□□□ -2.14
LRFN1Q9P244 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
LRFN1Q9P244 RNU6-1209P-201ENST00000363655 107 ntBASIC1.68□□□□□ -2.14
LRFN1Q9P244 RNA5SP190-201ENST00000365222 118 ntBASIC1.68□□□□□ -2.14
LRFN1Q9P244 RNU4-17P-201ENST00000365598 141 ntBASIC1.68□□□□□ -2.14
LRFN1Q9P244 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.68□□□□□ -2.14
LRFN1Q9P244 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.68□□□□□ -2.14
LRFN1Q9P244 AC093850.1-201ENST00000454121 251 ntBASIC1.68□□□□□ -2.14
LRFN1Q9P244 AC092991.1-201ENST00000477176 376 ntBASIC1.68□□□□□ -2.14
LRFN1Q9P244 AC114811.1-201ENST00000507207 168 ntBASIC1.68□□□□□ -2.14
LRFN1Q9P244 SNORA25.15-201ENST00000516487 89 ntBASIC1.68□□□□□ -2.14
LRFN1Q9P244 RNU6-453P-201ENST00000516819 85 ntBASIC1.68□□□□□ -2.14
LRFN1Q9P244 AC087685.1-201ENST00000587507 141 ntBASIC1.68□□□□□ -2.14
LRFN1Q9P244 AC084768.2-201ENST00000622736 221 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms