Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 MIR3145-201ENST00000580727 82 ntBASIC0.21□□□□□ -2.38
CCDC88CQ9P219 MIR4305-201ENST00000583252 102 ntBASIC0.21□□□□□ -2.38
CCDC88CQ9P219 MIR4791-201ENST00000607666 84 ntBASIC0.21□□□□□ -2.38
CCDC88CQ9P219 AC006157.1-201ENST00000611750 366 ntBASIC0.21□□□□□ -2.38
CCDC88CQ9P219 Y_RNA.88-201ENST00000363029 99 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 Y_RNA.143-201ENST00000363520 106 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 SNORD81.2-201ENST00000365153 76 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 RNU6-580P-201ENST00000365159 107 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 RNY1P8-201ENST00000383970 114 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 Y_RNA.433-201ENST00000384089 102 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 SNORA72-201ENST00000384339 132 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 Y_RNA.474-201ENST00000384341 102 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 MT-TN-201ENST00000387400 73 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 MIR1827-201ENST00000408549 66 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 RNU4-30P-201ENST00000410245 143 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 Y_RNA.619-201ENST00000410951 90 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 AC009161.1-201ENST00000417306 376 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 AC096644.2-201ENST00000429278 159 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 FGF7P6-202ENST00000451282 293 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 U8.19-201ENST00000459095 133 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 HMGN1P10-201ENST00000474557 553 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.2□□□□□ -2.38
CCDC88CQ9P219 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.2□□□□□ -2.38
CCDC88CQ9P219 Y_RNA.661-201ENST00000516003 99 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 MIR5690-201ENST00000583739 73 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 AL162730.1-201ENST00000605734 292 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 AC006441.5-201ENST00000612680 209 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 AC011476.5-201ENST00000615594 130 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 MIR6740-201ENST00000618268 113 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 AC127459.3-201ENST00000624328 466 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 SNORD81.1-201ENST00000363064 77 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 Y_RNA.168-201ENST00000363740 102 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 RNU6-1175P-201ENST00000365200 107 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 SNORA2A-201ENST00000383885 135 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 MIR215-201ENST00000384858 110 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 MIR573-201ENST00000384964 99 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 RNU6-855P-201ENST00000410395 104 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 MTCO2P27-201ENST00000420740 428 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.2□□□□□ -2.38
CCDC88CQ9P219 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.2□□□□□ -2.38
CCDC88CQ9P219 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 SNORD45.4-201ENST00000516629 73 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.2□□□□□ -2.38
CCDC88CQ9P219 AC055872.1-201ENST00000570978 278 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 MIR5692C2-201ENST00000577959 77 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.2□□□□□ -2.38
CCDC88CQ9P219 AC104985.2-201ENST00000620598 500 ntBASIC0.2□□□□□ -2.38
CCDC88CQ9P219 MIR18A-201ENST00000362310 71 ntBASIC0.19□□□□□ -2.38
CCDC88CQ9P219 Y_RNA.72-201ENST00000362894 103 ntBASIC0.19□□□□□ -2.38
CCDC88CQ9P219 RNU4-40P-201ENST00000364351 143 ntBASIC0.19□□□□□ -2.38
CCDC88CQ9P219 Y_RNA.279-201ENST00000364763 95 ntBASIC0.19□□□□□ -2.38
CCDC88CQ9P219 U8.7-201ENST00000364940 136 ntBASIC0.19□□□□□ -2.38
CCDC88CQ9P219 SNORA24-201ENST00000384096 131 ntBASIC0.19□□□□□ -2.38
CCDC88CQ9P219 Y_RNA.518-201ENST00000384552 113 ntBASIC0.19□□□□□ -2.38
CCDC88CQ9P219 Y_RNA.587-201ENST00000391210 103 ntBASIC0.19□□□□□ -2.38
CCDC88CQ9P219 RNU6-994P-201ENST00000410507 111 ntBASIC0.19□□□□□ -2.38
CCDC88CQ9P219 MCFD2P1-201ENST00000417812 300 ntBASIC0.19□□□□□ -2.38
CCDC88CQ9P219 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.19□□□□□ -2.38
CCDC88CQ9P219 MTCO3P10-201ENST00000455912 772 ntBASIC0.19□□□□□ -2.38
CCDC88CQ9P219 RNU7-152P-201ENST00000458982 64 ntBASIC0.19□□□□□ -2.38
CCDC88CQ9P219 PRDX4P1-201ENST00000507189 574 ntBASIC0.19□□□□□ -2.38
CCDC88CQ9P219 SNORA18.4-201ENST00000516440 124 ntBASIC0.19□□□□□ -2.38
CCDC88CQ9P219 AC100767.1-201ENST00000528178 123 ntBASIC0.19□□□□□ -2.38
CCDC88CQ9P219 AC024405.2-202ENST00000532731 184 ntBASIC0.19□□□□□ -2.38
CCDC88CQ9P219 uc_338.4-201ENST00000616635 176 ntBASIC0.19□□□□□ -2.38
CCDC88CQ9P219 MIR4251-201ENST00000635819 61 ntBASIC0.19□□□□□ -2.38
CCDC88CQ9P219 AL669831.3-213ENST00000636676 183 ntBASIC0.19□□□□□ -2.38
CCDC88CQ9P219 MIR6086-201ENST00000638065 55 ntBASIC0.19□□□□□ -2.38
CCDC88CQ9P219 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.19□□□□□ -2.38
CCDC88CQ9P219 Y_RNA.86-201ENST00000363020 111 ntBASIC0.18□□□□□ -2.38
CCDC88CQ9P219 Y_RNA.222-201ENST00000364264 102 ntBASIC0.18□□□□□ -2.38
CCDC88CQ9P219 RNU6-1327P-201ENST00000365302 105 ntBASIC0.18□□□□□ -2.38
CCDC88CQ9P219 Y_RNA.570-201ENST00000384750 101 ntBASIC0.18□□□□□ -2.38
CCDC88CQ9P219 MIR520F-201ENST00000384824 87 ntBASIC0.18□□□□□ -2.38
CCDC88CQ9P219 MIR548A2-201ENST00000384956 97 ntBASIC0.18□□□□□ -2.38
CCDC88CQ9P219 RNU6-205P-201ENST00000390858 107 ntBASIC0.18□□□□□ -2.38
CCDC88CQ9P219 Y_RNA.645-201ENST00000391229 102 ntBASIC0.18□□□□□ -2.38
CCDC88CQ9P219 AC005042.3-201ENST00000453230 174 ntBASIC0.18□□□□□ -2.38
CCDC88CQ9P219 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.18□□□□□ -2.38
CCDC88CQ9P219 ELOCP24-201ENST00000456370 334 ntBASIC0.18□□□□□ -2.38
CCDC88CQ9P219 RNU6-437P-201ENST00000459408 95 ntBASIC0.18□□□□□ -2.38
CCDC88CQ9P219 U8.20-201ENST00000459445 131 ntBASIC0.18□□□□□ -2.38
CCDC88CQ9P219 HAR1A.1-201ENST00000459583 118 ntBASIC0.18□□□□□ -2.38
CCDC88CQ9P219 NDUFA4P2-201ENST00000489989 244 ntBASIC0.18□□□□□ -2.38
CCDC88CQ9P219 RNU6-863P-201ENST00000515989 104 ntBASIC0.18□□□□□ -2.38
CCDC88CQ9P219 RNU6-1110P-201ENST00000516462 101 ntBASIC0.18□□□□□ -2.38
CCDC88CQ9P219 RNU6-264P-201ENST00000517134 104 ntBASIC0.18□□□□□ -2.38
CCDC88CQ9P219 MIR5701-3-201ENST00000578890 82 ntBASIC0.18□□□□□ -2.38
CCDC88CQ9P219 MIR5701-1-201ENST00000585138 82 ntBASIC0.18□□□□□ -2.38
CCDC88CQ9P219 AC025253.1-201ENST00000613623 543 ntBASIC0.18□□□□□ -2.38
CCDC88CQ9P219 MIR5701-2-201ENST00000615634 82 ntBASIC0.18□□□□□ -2.38
CCDC88CQ9P219 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
CCDC88CQ9P219 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.18□□□□□ -2.38
CCDC88CQ9P219 RNU4-80P-201ENST00000363200 141 ntBASIC0.18□□□□□ -2.38
CCDC88CQ9P219 Y_RNA.187-201ENST00000363918 113 ntBASIC0.18□□□□□ -2.38
CCDC88CQ9P219 SNORD14.1-201ENST00000365609 90 ntBASIC0.18□□□□□ -2.38
CCDC88CQ9P219 Y_RNA.428-201ENST00000384078 102 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms