Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.59□□□□□ -2.31
HOXC10Q9NYD6 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.59□□□□□ -2.31
HOXC10Q9NYD6 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.59□□□□□ -2.31
HOXC10Q9NYD6 Y_RNA.713-201ENST00000517013 96 ntBASIC0.59□□□□□ -2.31
HOXC10Q9NYD6 AC024405.2-202ENST00000532731 184 ntBASIC0.59□□□□□ -2.31
HOXC10Q9NYD6 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.58□□□□□ -2.32
HOXC10Q9NYD6 Y_RNA.331-201ENST00000365267 102 ntBASIC0.58□□□□□ -2.32
HOXC10Q9NYD6 SNORD38C-201ENST00000384381 69 ntBASIC0.58□□□□□ -2.32
HOXC10Q9NYD6 Y_RNA.496-201ENST00000384444 101 ntBASIC0.58□□□□□ -2.32
HOXC10Q9NYD6 Y_RNA.551-201ENST00000384661 102 ntBASIC0.58□□□□□ -2.32
HOXC10Q9NYD6 RNU6-613P-201ENST00000410412 108 ntBASIC0.58□□□□□ -2.32
HOXC10Q9NYD6 MTCO2P27-201ENST00000420740 428 ntBASIC0.58□□□□□ -2.32
HOXC10Q9NYD6 AC114737.2-201ENST00000421583 173 ntBASIC0.58□□□□□ -2.32
HOXC10Q9NYD6 NDUFA4P2-201ENST00000489989 244 ntBASIC0.58□□□□□ -2.32
HOXC10Q9NYD6 RNU4-77P-201ENST00000516692 156 ntBASIC0.58□□□□□ -2.32
HOXC10Q9NYD6 AL355375.2-201ENST00000574825 175 ntBASIC0.58□□□□□ -2.32
HOXC10Q9NYD6 MIR2681-201ENST00000581814 105 ntBASIC0.58□□□□□ -2.32
HOXC10Q9NYD6 MIR548AR-201ENST00000582191 57 ntBASIC0.58□□□□□ -2.32
HOXC10Q9NYD6 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
HOXC10Q9NYD6 MIR924-201ENST00000638017 53 ntBASIC0.58□□□□□ -2.32
HOXC10Q9NYD6 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
HOXC10Q9NYD6 SNORA25.3-201ENST00000363205 127 ntBASIC0.57□□□□□ -2.32
HOXC10Q9NYD6 Y_RNA.242-201ENST00000364473 110 ntBASIC0.57□□□□□ -2.32
HOXC10Q9NYD6 SNORD113.3-201ENST00000364630 78 ntBASIC0.57□□□□□ -2.32
HOXC10Q9NYD6 U8.7-201ENST00000364940 136 ntBASIC0.57□□□□□ -2.32
HOXC10Q9NYD6 Y_RNA.330-201ENST00000365230 109 ntBASIC0.57□□□□□ -2.32
HOXC10Q9NYD6 RNU6-442P-201ENST00000383968 104 ntBASIC0.57□□□□□ -2.32
HOXC10Q9NYD6 AC096644.2-201ENST00000429278 159 ntBASIC0.57□□□□□ -2.32
HOXC10Q9NYD6 AL136317.1-201ENST00000612653 226 ntBASIC0.57□□□□□ -2.32
HOXC10Q9NYD6 AC006441.5-201ENST00000612680 209 ntBASIC0.57□□□□□ -2.32
HOXC10Q9NYD6 MIR4251-201ENST00000635819 61 ntBASIC0.57□□□□□ -2.32
HOXC10Q9NYD6 AC023934.1-201ENST00000574529 2389 ntBASIC0.57□□□□□ -2.32
HOXC10Q9NYD6 Y_RNA.39-201ENST00000362620 98 ntBASIC0.56□□□□□ -2.32
HOXC10Q9NYD6 RNU6-1209P-201ENST00000363655 107 ntBASIC0.56□□□□□ -2.32
HOXC10Q9NYD6 RNU6-268P-201ENST00000364174 107 ntBASIC0.56□□□□□ -2.32
HOXC10Q9NYD6 Y_RNA.526-201ENST00000384572 110 ntBASIC0.56□□□□□ -2.32
HOXC10Q9NYD6 AL590004.1-201ENST00000405321 300 ntBASIC0.56□□□□□ -2.32
HOXC10Q9NYD6 SNORD19B-201ENST00000459623 84 ntBASIC0.56□□□□□ -2.32
HOXC10Q9NYD6 AC018659.1-201ENST00000551083 169 ntBASIC0.56□□□□□ -2.32
HOXC10Q9NYD6 AC023827.1-201ENST00000569247 97 ntBASIC0.56□□□□□ -2.32
HOXC10Q9NYD6 AC008507.4-201ENST00000585464 127 ntBASIC0.56□□□□□ -2.32
HOXC10Q9NYD6 DEFB117-201ENST00000602356 141 ntBASIC0.56□□□□□ -2.32
HOXC10Q9NYD6 AC011373.1-201ENST00000607270 237 ntBASIC0.56□□□□□ -2.32
HOXC10Q9NYD6 Pinc.1-201ENST00000616452 154 ntBASIC0.56□□□□□ -2.32
HOXC10Q9NYD6 MIR548AY-201ENST00000617669 107 ntBASIC0.56□□□□□ -2.32
HOXC10Q9NYD6 MIR6516-201ENST00000630554 81 ntBASIC0.56□□□□□ -2.32
HOXC10Q9NYD6 AL606534.2-204ENST00000635008 178 ntBASIC0.56□□□□□ -2.32
HOXC10Q9NYD6 MIR1302-1-201ENST00000637932 143 ntBASIC0.56□□□□□ -2.32
HOXC10Q9NYD6 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
HOXC10Q9NYD6 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.55□□□□□ -2.32
HOXC10Q9NYD6 RNU6-580P-201ENST00000365159 107 ntBASIC0.55□□□□□ -2.32
HOXC10Q9NYD6 RNU6-1335P-201ENST00000365426 107 ntBASIC0.55□□□□□ -2.32
HOXC10Q9NYD6 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
HOXC10Q9NYD6 Y_RNA.537-201ENST00000384626 109 ntBASIC0.55□□□□□ -2.32
HOXC10Q9NYD6 SNORD28B-201ENST00000390993 75 ntBASIC0.55□□□□□ -2.32
HOXC10Q9NYD6 MIR1827-201ENST00000408549 66 ntBASIC0.55□□□□□ -2.32
HOXC10Q9NYD6 Y_RNA.632-201ENST00000459189 102 ntBASIC0.55□□□□□ -2.32
HOXC10Q9NYD6 RNU2-13P-201ENST00000515909 113 ntBASIC0.55□□□□□ -2.32
HOXC10Q9NYD6 RNU6-475P-201ENST00000516073 104 ntBASIC0.55□□□□□ -2.32
HOXC10Q9NYD6 RNU6-976P-201ENST00000516086 111 ntBASIC0.55□□□□□ -2.32
HOXC10Q9NYD6 AP003484.1-201ENST00000530974 250 ntBASIC0.55□□□□□ -2.32
HOXC10Q9NYD6 AC243829.6-201ENST00000612652 106 ntBASIC0.55□□□□□ -2.32
HOXC10Q9NYD6 Y_RNA.5-201ENST00000362334 102 ntBASIC0.54□□□□□ -2.32
HOXC10Q9NYD6 Y_RNA.168-201ENST00000363740 102 ntBASIC0.54□□□□□ -2.32
HOXC10Q9NYD6 RNU4-50P-201ENST00000364361 141 ntBASIC0.54□□□□□ -2.32
HOXC10Q9NYD6 RNU6-1067P-201ENST00000384752 107 ntBASIC0.54□□□□□ -2.32
HOXC10Q9NYD6 RNU6-1248P-201ENST00000391096 64 ntBASIC0.54□□□□□ -2.32
HOXC10Q9NYD6 AL160004.2-201ENST00000432935 350 ntBASIC0.54□□□□□ -2.32
HOXC10Q9NYD6 U8.20-201ENST00000459445 131 ntBASIC0.54□□□□□ -2.32
HOXC10Q9NYD6 RPL23AP54-201ENST00000495129 419 ntBASIC0.54□□□□□ -2.32
HOXC10Q9NYD6 RNU6-1007P-201ENST00000516586 107 ntBASIC0.54□□□□□ -2.32
HOXC10Q9NYD6 MIR2115-201ENST00000516657 100 ntBASIC0.54□□□□□ -2.32
HOXC10Q9NYD6 RPS29P30-201ENST00000600975 111 ntBASIC0.54□□□□□ -2.32
HOXC10Q9NYD6 AC092447.9-201ENST00000603395 144 ntBASIC0.54□□□□□ -2.32
HOXC10Q9NYD6 SNORD58B-201ENST00000607313 66 ntBASIC0.54□□□□□ -2.32
HOXC10Q9NYD6 JPX_2.1-201ENST00000614161 69 ntBASIC0.54□□□□□ -2.32
HOXC10Q9NYD6 AC084781.2-201ENST00000615568 161 ntBASIC0.54□□□□□ -2.32
HOXC10Q9NYD6 MIR377-201ENST00000362145 69 ntBASIC0.53□□□□□ -2.32
HOXC10Q9NYD6 Y_RNA.222-201ENST00000364264 102 ntBASIC0.53□□□□□ -2.32
HOXC10Q9NYD6 MT-TN-201ENST00000387400 73 ntBASIC0.53□□□□□ -2.32
HOXC10Q9NYD6 U8.17-201ENST00000391292 132 ntBASIC0.53□□□□□ -2.32
HOXC10Q9NYD6 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.53□□□□□ -2.32
HOXC10Q9NYD6 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.53□□□□□ -2.32
HOXC10Q9NYD6 AC104695.3-201ENST00000604052 296 ntBASIC0.53□□□□□ -2.32
HOXC10Q9NYD6 SNORA72.1-201ENST00000363485 129 ntBASIC0.52□□□□□ -2.33
HOXC10Q9NYD6 Y_RNA.148-201ENST00000363557 117 ntBASIC0.52□□□□□ -2.33
HOXC10Q9NYD6 RNA5SP457-201ENST00000363657 124 ntBASIC0.52□□□□□ -2.33
HOXC10Q9NYD6 Y_RNA.263-201ENST00000364659 114 ntBASIC0.52□□□□□ -2.33
HOXC10Q9NYD6 Y_RNA.439-201ENST00000384119 94 ntBASIC0.52□□□□□ -2.33
HOXC10Q9NYD6 SNORA72.4-201ENST00000384174 132 ntBASIC0.52□□□□□ -2.33
HOXC10Q9NYD6 SNORD11-201ENST00000459124 84 ntBASIC0.52□□□□□ -2.33
HOXC10Q9NYD6 RNU6-437P-201ENST00000459408 95 ntBASIC0.52□□□□□ -2.33
HOXC10Q9NYD6 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.52□□□□□ -2.33
HOXC10Q9NYD6 RNU7-110P-201ENST00000516891 62 ntBASIC0.52□□□□□ -2.33
HOXC10Q9NYD6 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.52□□□□□ -2.33
HOXC10Q9NYD6 AL080274.1-201ENST00000605565 220 ntBASIC0.52□□□□□ -2.33
HOXC10Q9NYD6 AC104985.2-201ENST00000620598 500 ntBASIC0.52□□□□□ -2.33
HOXC10Q9NYD6 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
HOXC10Q9NYD6 RNU6-801P-201ENST00000364087 105 ntBASIC0.51□□□□□ -2.33
HOXC10Q9NYD6 RNU6-654P-201ENST00000364373 107 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms