Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 Y_RNA.306-201ENST00000365015 102 ntBASIC1.29□□□□□ -2.2
NDE1Q9NXR1 SNORA25.9-201ENST00000365087 128 ntBASIC1.29□□□□□ -2.2
NDE1Q9NXR1 Y_RNA.312-201ENST00000365089 102 ntBASIC1.29□□□□□ -2.2
NDE1Q9NXR1 Y_RNA.322-201ENST00000365151 102 ntBASIC1.29□□□□□ -2.2
NDE1Q9NXR1 RNA5SP259-201ENST00000365541 109 ntBASIC1.29□□□□□ -2.2
NDE1Q9NXR1 MIR522-201ENST00000385071 87 ntBASIC1.29□□□□□ -2.2
NDE1Q9NXR1 MIR513A1-201ENST00000385138 129 ntBASIC1.29□□□□□ -2.2
NDE1Q9NXR1 MIR660-201ENST00000385235 97 ntBASIC1.29□□□□□ -2.2
NDE1Q9NXR1 RNU6-321P-201ENST00000410912 106 ntBASIC1.29□□□□□ -2.2
NDE1Q9NXR1 BTF3P4-201ENST00000418852 495 ntBASIC1.29□□□□□ -2.2
NDE1Q9NXR1 FTH1P12-201ENST00000432137 551 ntBASIC1.29□□□□□ -2.2
NDE1Q9NXR1 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.29□□□□□ -2.2
NDE1Q9NXR1 Y_RNA.650-201ENST00000459002 102 ntBASIC1.29□□□□□ -2.2
NDE1Q9NXR1 NDUFA4P2-201ENST00000489989 244 ntBASIC1.29□□□□□ -2.2
NDE1Q9NXR1 AC114811.1-201ENST00000507207 168 ntBASIC1.29□□□□□ -2.2
NDE1Q9NXR1 RNU7-12P-201ENST00000516030 62 ntBASIC1.29□□□□□ -2.2
NDE1Q9NXR1 RNU7-28P-201ENST00000516759 62 ntBASIC1.29□□□□□ -2.2
NDE1Q9NXR1 Y_RNA.777-201ENST00000516982 102 ntBASIC1.29□□□□□ -2.2
NDE1Q9NXR1 RNU6-111P-201ENST00000517179 105 ntBASIC1.29□□□□□ -2.2
NDE1Q9NXR1 AC019176.1-201ENST00000518519 225 ntBASIC1.29□□□□□ -2.2
NDE1Q9NXR1 MIR3683-201ENST00000580847 82 ntBASIC1.29□□□□□ -2.2
NDE1Q9NXR1 Y_RNA.771-201ENST00000598668 102 ntBASIC1.29□□□□□ -2.2
NDE1Q9NXR1 AP001485.1-201ENST00000604799 199 ntBASIC1.29□□□□□ -2.2
NDE1Q9NXR1 JPX_2.1-201ENST00000614161 69 ntBASIC1.29□□□□□ -2.2
NDE1Q9NXR1 Y_RNA.789-201ENST00000622480 102 ntBASIC1.29□□□□□ -2.2
NDE1Q9NXR1 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
NDE1Q9NXR1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.28□□□□□ -2.2
NDE1Q9NXR1 Y_RNA.24-201ENST00000362508 103 ntBASIC1.28□□□□□ -2.2
NDE1Q9NXR1 RNU6-674P-201ENST00000363831 107 ntBASIC1.28□□□□□ -2.2
NDE1Q9NXR1 RNU6-163P-201ENST00000384396 106 ntBASIC1.28□□□□□ -2.2
NDE1Q9NXR1 MIR499A-201ENST00000384903 122 ntBASIC1.28□□□□□ -2.2
NDE1Q9NXR1 SNORA17.3-201ENST00000391159 129 ntBASIC1.28□□□□□ -2.2
NDE1Q9NXR1 snoU13.9-201ENST00000458927 103 ntBASIC1.28□□□□□ -2.2
NDE1Q9NXR1 RNY3P16-201ENST00000516338 101 ntBASIC1.28□□□□□ -2.2
NDE1Q9NXR1 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.28□□□□□ -2.2
NDE1Q9NXR1 AC006006.1-201ENST00000603082 144 ntBASIC1.28□□□□□ -2.2
NDE1Q9NXR1 AC120024.3-201ENST00000603167 156 ntBASIC1.28□□□□□ -2.2
NDE1Q9NXR1 AL513423.1-201ENST00000621695 132 ntBASIC1.28□□□□□ -2.2
NDE1Q9NXR1 Y_RNA.20-201ENST00000362479 113 ntBASIC1.27□□□□□ -2.21
NDE1Q9NXR1 U8.5-201ENST00000364528 136 ntBASIC1.27□□□□□ -2.21
NDE1Q9NXR1 SNORA20.1-201ENST00000364790 130 ntBASIC1.27□□□□□ -2.21
NDE1Q9NXR1 Y_RNA.292-201ENST00000364904 97 ntBASIC1.27□□□□□ -2.21
NDE1Q9NXR1 RNU6-969P-201ENST00000383900 105 ntBASIC1.27□□□□□ -2.21
NDE1Q9NXR1 RNU6-131P-201ENST00000391144 107 ntBASIC1.27□□□□□ -2.21
NDE1Q9NXR1 AC245517.4-201ENST00000448601 281 ntBASIC1.27□□□□□ -2.21
NDE1Q9NXR1 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.27□□□□□ -2.21
NDE1Q9NXR1 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.27□□□□□ -2.21
NDE1Q9NXR1 AC100767.1-201ENST00000528178 123 ntBASIC1.27□□□□□ -2.21
NDE1Q9NXR1 AC015688.6-201ENST00000577737 104 ntBASIC1.27□□□□□ -2.21
NDE1Q9NXR1 MIR4724-201ENST00000579485 89 ntBASIC1.27□□□□□ -2.21
NDE1Q9NXR1 MIR4282-201ENST00000583613 67 ntBASIC1.27□□□□□ -2.21
NDE1Q9NXR1 AC011921.3-201ENST00000605540 361 ntBASIC1.27□□□□□ -2.21
NDE1Q9NXR1 BX284668.6-201ENST00000606899 438 ntBASIC1.27□□□□□ -2.21
NDE1Q9NXR1 AL442067.1-201ENST00000613261 223 ntBASIC1.27□□□□□ -2.21
NDE1Q9NXR1 Y_RNA.802-201ENST00000614892 130 ntBASIC1.27□□□□□ -2.21
NDE1Q9NXR1 AL365265.1-201ENST00000621045 234 ntBASIC1.27□□□□□ -2.21
NDE1Q9NXR1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
NDE1Q9NXR1 RNU6-1123P-201ENST00000362347 106 ntBASIC1.26□□□□□ -2.21
NDE1Q9NXR1 RNU6-1084P-201ENST00000362498 107 ntBASIC1.26□□□□□ -2.21
NDE1Q9NXR1 SNORD50B-201ENST00000364995 70 ntBASIC1.26□□□□□ -2.21
NDE1Q9NXR1 RNU6-144P-201ENST00000383951 107 ntBASIC1.26□□□□□ -2.21
NDE1Q9NXR1 SNORD11-201ENST00000459124 84 ntBASIC1.26□□□□□ -2.21
NDE1Q9NXR1 AC092991.1-201ENST00000477176 376 ntBASIC1.26□□□□□ -2.21
NDE1Q9NXR1 AC005840.1-201ENST00000498412 377 ntBASIC1.26□□□□□ -2.21
NDE1Q9NXR1 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.26□□□□□ -2.21
NDE1Q9NXR1 RNU6-1023P-201ENST00000516137 106 ntBASIC1.26□□□□□ -2.21
NDE1Q9NXR1 SNORD45.4-201ENST00000516629 73 ntBASIC1.26□□□□□ -2.21
NDE1Q9NXR1 RNU6-1271P-201ENST00000517049 105 ntBASIC1.26□□□□□ -2.21
NDE1Q9NXR1 AC090821.2-201ENST00000523552 176 ntBASIC1.26□□□□□ -2.21
NDE1Q9NXR1 MIR4762-201ENST00000585261 75 ntBASIC1.26□□□□□ -2.21
NDE1Q9NXR1 AL049861.1-201ENST00000603130 150 ntBASIC1.26□□□□□ -2.21
NDE1Q9NXR1 AL359821.1-201ENST00000605519 182 ntBASIC1.26□□□□□ -2.21
NDE1Q9NXR1 AL365434.2-201ENST00000607979 234 ntBASIC1.26□□□□□ -2.21
NDE1Q9NXR1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
NDE1Q9NXR1 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
NDE1Q9NXR1 MIR302D-201ENST00000362275 68 ntBASIC1.25□□□□□ -2.21
NDE1Q9NXR1 Y_RNA.188-201ENST00000363952 111 ntBASIC1.25□□□□□ -2.21
NDE1Q9NXR1 Y_RNA.304-201ENST00000365011 112 ntBASIC1.25□□□□□ -2.21
NDE1Q9NXR1 Y_RNA.401-201ENST00000383965 117 ntBASIC1.25□□□□□ -2.21
NDE1Q9NXR1 SNORA8.3-201ENST00000384679 139 ntBASIC1.25□□□□□ -2.21
NDE1Q9NXR1 SNORD72-201ENST00000390994 80 ntBASIC1.25□□□□□ -2.21
NDE1Q9NXR1 CYCTP-201ENST00000504253 315 ntBASIC1.25□□□□□ -2.21
NDE1Q9NXR1 MIR8070-201ENST00000616510 88 ntBASIC1.25□□□□□ -2.21
NDE1Q9NXR1 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
NDE1Q9NXR1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
NDE1Q9NXR1 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.24□□□□□ -2.21
NDE1Q9NXR1 RNU6-653P-201ENST00000363074 106 ntBASIC1.24□□□□□ -2.21
NDE1Q9NXR1 snoU2_19.4-201ENST00000364329 80 ntBASIC1.24□□□□□ -2.21
NDE1Q9NXR1 Y_RNA.229-201ENST00000364347 113 ntBASIC1.24□□□□□ -2.21
NDE1Q9NXR1 RNU6-923P-201ENST00000364753 107 ntBASIC1.24□□□□□ -2.21
NDE1Q9NXR1 RNU6-60P-201ENST00000364792 103 ntBASIC1.24□□□□□ -2.21
NDE1Q9NXR1 SNORD1A-201ENST00000364968 72 ntBASIC1.24□□□□□ -2.21
NDE1Q9NXR1 Y_RNA.308-201ENST00000365043 101 ntBASIC1.24□□□□□ -2.21
NDE1Q9NXR1 Y_RNA.355-201ENST00000365462 98 ntBASIC1.24□□□□□ -2.21
NDE1Q9NXR1 Y_RNA.478-201ENST00000384358 107 ntBASIC1.24□□□□□ -2.21
NDE1Q9NXR1 MIR526A1-201ENST00000384897 85 ntBASIC1.24□□□□□ -2.21
NDE1Q9NXR1 MIR626-201ENST00000385032 94 ntBASIC1.24□□□□□ -2.21
NDE1Q9NXR1 MT-TT-201ENST00000387460 66 ntBASIC1.24□□□□□ -2.21
NDE1Q9NXR1 MIR526A2-201ENST00000390198 65 ntBASIC1.24□□□□□ -2.21
NDE1Q9NXR1 RNU6-493P-201ENST00000391321 108 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms