Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 RNU7-116P-201ENST00000516940 62 ntBASIC1.41□□□□□ -2.18
SMC4Q9NTJ3 DEFB108E-201ENST00000524692 240 ntBASIC1.41□□□□□ -2.18
SMC4Q9NTJ3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.41□□□□□ -2.18
SMC4Q9NTJ3 AC005357.1-201ENST00000588399 301 ntBASIC1.41□□□□□ -2.18
SMC4Q9NTJ3 AC006504.6-201ENST00000590142 199 ntBASIC1.41□□□□□ -2.18
SMC4Q9NTJ3 AC008737.2-201ENST00000599446 118 ntBASIC1.41□□□□□ -2.18
SMC4Q9NTJ3 RNU6-326P-201ENST00000365480 107 ntBASIC1.4□□□□□ -2.19
SMC4Q9NTJ3 SNORA25-201ENST00000384384 134 ntBASIC1.4□□□□□ -2.19
SMC4Q9NTJ3 RNU6-738P-201ENST00000384531 106 ntBASIC1.4□□□□□ -2.19
SMC4Q9NTJ3 MIR548F4-201ENST00000408515 105 ntBASIC1.4□□□□□ -2.19
SMC4Q9NTJ3 NDUFA4P2-201ENST00000489989 244 ntBASIC1.4□□□□□ -2.19
SMC4Q9NTJ3 SNORA31.4-201ENST00000516049 129 ntBASIC1.4□□□□□ -2.19
SMC4Q9NTJ3 AP001282.2-201ENST00000616149 309 ntBASIC1.4□□□□□ -2.19
SMC4Q9NTJ3 AC027335.2-201ENST00000624030 375 ntBASIC1.4□□□□□ -2.19
SMC4Q9NTJ3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.4□□□□□ -2.19
SMC4Q9NTJ3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
SMC4Q9NTJ3 SNORA70.7-201ENST00000384159 133 ntBASIC1.39□□□□□ -2.19
SMC4Q9NTJ3 MIR452-201ENST00000385020 85 ntBASIC1.39□□□□□ -2.19
SMC4Q9NTJ3 MT-TW-201ENST00000387382 68 ntBASIC1.39□□□□□ -2.19
SMC4Q9NTJ3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
SMC4Q9NTJ3 MIR1298-201ENST00000408783 112 ntBASIC1.39□□□□□ -2.19
SMC4Q9NTJ3 RNU6-383P-201ENST00000410864 94 ntBASIC1.39□□□□□ -2.19
SMC4Q9NTJ3 SNORD116-28-201ENST00000516123 91 ntBASIC1.39□□□□□ -2.19
SMC4Q9NTJ3 RNU6-1143P-201ENST00000516125 104 ntBASIC1.39□□□□□ -2.19
SMC4Q9NTJ3 SNORD45.4-201ENST00000516629 73 ntBASIC1.39□□□□□ -2.19
SMC4Q9NTJ3 MIR4295-201ENST00000585286 85 ntBASIC1.39□□□□□ -2.19
SMC4Q9NTJ3 AL078603.1-201ENST00000603824 313 ntBASIC1.39□□□□□ -2.19
SMC4Q9NTJ3 AL022345.2-201ENST00000606307 135 ntBASIC1.39□□□□□ -2.19
SMC4Q9NTJ3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.39□□□□□ -2.19
SMC4Q9NTJ3 RNU6-42P-201ENST00000384165 107 ntBASIC1.38□□□□□ -2.19
SMC4Q9NTJ3 Y_RNA.466-201ENST00000384294 113 ntBASIC1.38□□□□□ -2.19
SMC4Q9NTJ3 MIR516B2-201ENST00000385190 85 ntBASIC1.38□□□□□ -2.19
SMC4Q9NTJ3 RPL39P39-201ENST00000455840 151 ntBASIC1.38□□□□□ -2.19
SMC4Q9NTJ3 RNU6-437P-201ENST00000459408 95 ntBASIC1.38□□□□□ -2.19
SMC4Q9NTJ3 AC087343.1-201ENST00000477341 475 ntBASIC1.38□□□□□ -2.19
SMC4Q9NTJ3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.38□□□□□ -2.19
SMC4Q9NTJ3 SCARNA15.1-201ENST00000516384 125 ntBASIC1.38□□□□□ -2.19
SMC4Q9NTJ3 FAM106DP-201ENST00000586416 501 ntBASIC1.38□□□□□ -2.19
SMC4Q9NTJ3 AL512605.2-201ENST00000592972 256 ntBASIC1.38□□□□□ -2.19
SMC4Q9NTJ3 AL360085.1-201ENST00000604713 532 ntBASIC1.38□□□□□ -2.19
SMC4Q9NTJ3 snoU18.1-201ENST00000629629 71 ntBASIC1.38□□□□□ -2.19
SMC4Q9NTJ3 RNU6-1084P-201ENST00000362498 107 ntBASIC1.37□□□□□ -2.19
SMC4Q9NTJ3 Y_RNA.217-201ENST00000364214 105 ntBASIC1.37□□□□□ -2.19
SMC4Q9NTJ3 Y_RNA.237-201ENST00000364439 102 ntBASIC1.37□□□□□ -2.19
SMC4Q9NTJ3 Y_RNA.336-201ENST00000365307 109 ntBASIC1.37□□□□□ -2.19
SMC4Q9NTJ3 RNU6-969P-201ENST00000383900 105 ntBASIC1.37□□□□□ -2.19
SMC4Q9NTJ3 Y_RNA.483-201ENST00000384380 101 ntBASIC1.37□□□□□ -2.19
SMC4Q9NTJ3 RNU6-1248P-201ENST00000391096 64 ntBASIC1.37□□□□□ -2.19
SMC4Q9NTJ3 RNU6-651P-201ENST00000411040 105 ntBASIC1.37□□□□□ -2.19
SMC4Q9NTJ3 AC245047.7-201ENST00000440265 293 ntBASIC1.37□□□□□ -2.19
SMC4Q9NTJ3 Y_RNA.641-201ENST00000459414 105 ntBASIC1.37□□□□□ -2.19
SMC4Q9NTJ3 RPS23P4-201ENST00000487908 423 ntBASIC1.37□□□□□ -2.19
SMC4Q9NTJ3 AL133373.1-201ENST00000497098 94 ntBASIC1.37□□□□□ -2.19
SMC4Q9NTJ3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.37□□□□□ -2.19
SMC4Q9NTJ3 SERF1AP1-201ENST00000514575 187 ntBASIC1.37□□□□□ -2.19
SMC4Q9NTJ3 RNA5SP220-201ENST00000516298 104 ntBASIC1.37□□□□□ -2.19
SMC4Q9NTJ3 SNORA27.4-201ENST00000516650 95 ntBASIC1.37□□□□□ -2.19
SMC4Q9NTJ3 AC136443.5-201ENST00000603741 370 ntBASIC1.37□□□□□ -2.19
SMC4Q9NTJ3 AL008718.3-201ENST00000610217 321 ntBASIC1.37□□□□□ -2.19
SMC4Q9NTJ3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.37□□□□□ -2.19
SMC4Q9NTJ3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.36□□□□□ -2.19
SMC4Q9NTJ3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
SMC4Q9NTJ3 SNORA25.1-201ENST00000362326 128 ntBASIC1.36□□□□□ -2.19
SMC4Q9NTJ3 RNU6-1272P-201ENST00000362776 107 ntBASIC1.36□□□□□ -2.19
SMC4Q9NTJ3 Y_RNA.117-201ENST00000363294 101 ntBASIC1.36□□□□□ -2.19
SMC4Q9NTJ3 RNU1-124P-201ENST00000363861 145 ntBASIC1.36□□□□□ -2.19
SMC4Q9NTJ3 RNU4-10P-201ENST00000364383 140 ntBASIC1.36□□□□□ -2.19
SMC4Q9NTJ3 SNORD114-22-201ENST00000365423 72 ntBASIC1.36□□□□□ -2.19
SMC4Q9NTJ3 SNORD12-201ENST00000391002 90 ntBASIC1.36□□□□□ -2.19
SMC4Q9NTJ3 RNU6-131P-201ENST00000391144 107 ntBASIC1.36□□□□□ -2.19
SMC4Q9NTJ3 SNORA31.2-201ENST00000516019 134 ntBASIC1.36□□□□□ -2.19
SMC4Q9NTJ3 AC090142.3-201ENST00000519012 385 ntBASIC1.36□□□□□ -2.19
SMC4Q9NTJ3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.36□□□□□ -2.19
SMC4Q9NTJ3 RPL23AP91-201ENST00000569211 455 ntBASIC1.36□□□□□ -2.19
SMC4Q9NTJ3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.36□□□□□ -2.19
SMC4Q9NTJ3 SNORD114-21-201ENST00000606412 72 ntBASIC1.36□□□□□ -2.19
SMC4Q9NTJ3 BX284668.6-201ENST00000606899 438 ntBASIC1.36□□□□□ -2.19
SMC4Q9NTJ3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
SMC4Q9NTJ3 AC013791.1-201ENST00000616619 62 ntBASIC1.36□□□□□ -2.19
SMC4Q9NTJ3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SMC4Q9NTJ3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
SMC4Q9NTJ3 Y_RNA.145-201ENST00000363527 102 ntBASIC1.35□□□□□ -2.19
SMC4Q9NTJ3 RNU6-674P-201ENST00000363831 107 ntBASIC1.35□□□□□ -2.19
SMC4Q9NTJ3 RNU6-899P-201ENST00000363947 107 ntBASIC1.35□□□□□ -2.19
SMC4Q9NTJ3 RNU6-472P-201ENST00000384299 107 ntBASIC1.35□□□□□ -2.19
SMC4Q9NTJ3 SNORA53-201ENST00000391141 249 ntBASIC1.35□□□□□ -2.19
SMC4Q9NTJ3 BTF3P11-201ENST00000426582 477 ntBASIC1.35□□□□□ -2.19
SMC4Q9NTJ3 snoU13.25-201ENST00000458945 104 ntBASIC1.35□□□□□ -2.19
SMC4Q9NTJ3 TRBVB-201ENST00000477100 408 ntBASIC1.35□□□□□ -2.19
SMC4Q9NTJ3 RNU6-947P-201ENST00000516264 106 ntBASIC1.35□□□□□ -2.19
SMC4Q9NTJ3 Y_RNA.714-201ENST00000517065 90 ntBASIC1.35□□□□□ -2.19
SMC4Q9NTJ3 RNA5SP404-201ENST00000517118 132 ntBASIC1.35□□□□□ -2.19
SMC4Q9NTJ3 SNORA70.22-201ENST00000517160 124 ntBASIC1.35□□□□□ -2.19
SMC4Q9NTJ3 MIR8062-201ENST00000621515 85 ntBASIC1.35□□□□□ -2.19
SMC4Q9NTJ3 AL442644.1-201ENST00000454390 3105 ntBASIC1.35□□□□□ -2.19
SMC4Q9NTJ3 Y_RNA.459-201ENST00000384251 102 ntBASIC1.34□□□□□ -2.19
SMC4Q9NTJ3 Y_RNA.572-201ENST00000384757 98 ntBASIC1.34□□□□□ -2.19
SMC4Q9NTJ3 Y_RNA.574-201ENST00000384766 95 ntBASIC1.34□□□□□ -2.19
SMC4Q9NTJ3 MIR15B-201ENST00000385045 98 ntBASIC1.34□□□□□ -2.19
SMC4Q9NTJ3 SNORD72-201ENST00000390994 80 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms