Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 RNU6-540P-201ENST00000384622 101 ntBASIC-3.01□□□□□ -2.89
SMCO4Q9NRQ5 Y_RNA.547-201ENST00000384654 119 ntBASIC-3.01□□□□□ -2.89
SMCO4Q9NRQ5 Y_RNA.562-201ENST00000384695 113 ntBASIC-3.01□□□□□ -2.89
SMCO4Q9NRQ5 RNU6-913P-201ENST00000390913 95 ntBASIC-3.01□□□□□ -2.89
SMCO4Q9NRQ5 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-3.01□□□□□ -2.89
SMCO4Q9NRQ5 MTND1P11-201ENST00000456661 876 ntBASIC-3.01□□□□□ -2.89
SMCO4Q9NRQ5 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-3.01□□□□□ -2.89
SMCO4Q9NRQ5 MTND1P24-201ENST00000552175 861 ntBASIC-3.01□□□□□ -2.89
SMCO4Q9NRQ5 AL445584.3-201ENST00000617173 78 ntBASIC-3.01□□□□□ -2.89
SMCO4Q9NRQ5 Y_RNA.220-201ENST00000364244 109 ntBASIC-3.02□□□□□ -2.89
SMCO4Q9NRQ5 RNU6-715P-201ENST00000365204 103 ntBASIC-3.02□□□□□ -2.89
SMCO4Q9NRQ5 RNU6-154P-201ENST00000384306 106 ntBASIC-3.02□□□□□ -2.89
SMCO4Q9NRQ5 Y_RNA.543-201ENST00000384649 107 ntBASIC-3.02□□□□□ -2.89
SMCO4Q9NRQ5 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-3.02□□□□□ -2.89
SMCO4Q9NRQ5 MIR548AE1-201ENST00000583292 70 ntBASIC-3.02□□□□□ -2.89
SMCO4Q9NRQ5 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-3.03□□□□□ -2.89
SMCO4Q9NRQ5 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-3.03□□□□□ -2.89
SMCO4Q9NRQ5 Y_RNA.447-201ENST00000384184 113 ntBASIC-3.03□□□□□ -2.89
SMCO4Q9NRQ5 MIR450B-201ENST00000401182 78 ntBASIC-3.03□□□□□ -2.89
SMCO4Q9NRQ5 AC096949.1-201ENST00000412047 152 ntBASIC-3.03□□□□□ -2.89
SMCO4Q9NRQ5 SNORA25.10-201ENST00000515926 124 ntBASIC-3.03□□□□□ -2.89
SMCO4Q9NRQ5 AL662814.1-201ENST00000617364 121 ntBASIC-3.03□□□□□ -2.89
SMCO4Q9NRQ5 Y_RNA.28-201ENST00000362554 111 ntBASIC-3.04□□□□□ -2.9
SMCO4Q9NRQ5 SNORD115-25-201ENST00000362619 82 ntBASIC-3.04□□□□□ -2.9
SMCO4Q9NRQ5 RNU6-268P-201ENST00000364174 107 ntBASIC-3.04□□□□□ -2.9
SMCO4Q9NRQ5 RNY4P36-201ENST00000391116 96 ntBASIC-3.04□□□□□ -2.9
SMCO4Q9NRQ5 MTCO2P3-201ENST00000442543 421 ntBASIC-3.04□□□□□ -2.9
SMCO4Q9NRQ5 MTND1P27-201ENST00000451117 902 ntBASIC-3.04□□□□□ -2.9
SMCO4Q9NRQ5 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-3.04□□□□□ -2.9
SMCO4Q9NRQ5 RPL30P10-201ENST00000488148 337 ntBASIC-3.04□□□□□ -2.9
SMCO4Q9NRQ5 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-3.04□□□□□ -2.9
SMCO4Q9NRQ5 RNU6-958P-201ENST00000516995 106 ntBASIC-3.04□□□□□ -2.9
SMCO4Q9NRQ5 AC022616.4-201ENST00000522985 181 ntBASIC-3.04□□□□□ -2.9
SMCO4Q9NRQ5 RNU1-141P-201ENST00000364623 158 ntBASIC-3.05□□□□□ -2.9
SMCO4Q9NRQ5 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-3.05□□□□□ -2.9
SMCO4Q9NRQ5 U8.19-201ENST00000459095 133 ntBASIC-3.05□□□□□ -2.9
SMCO4Q9NRQ5 U8.22-201ENST00000459141 133 ntBASIC-3.05□□□□□ -2.9
SMCO4Q9NRQ5 AC079140.5-201ENST00000507882 310 ntBASIC-3.05□□□□□ -2.9
SMCO4Q9NRQ5 RNU6-107P-201ENST00000516643 102 ntBASIC-3.05□□□□□ -2.9
SMCO4Q9NRQ5 MTND1P35-201ENST00000526739 508 ntBASIC-3.05□□□□□ -2.9
SMCO4Q9NRQ5 AC008536.2-201ENST00000607284 349 ntBASIC-3.05□□□□□ -2.9
SMCO4Q9NRQ5 AC131235.4-201ENST00000609288 620 ntBASIC-3.05□□□□□ -2.9
SMCO4Q9NRQ5 MIR6818-201ENST00000621576 65 ntBASIC-3.05□□□□□ -2.9
SMCO4Q9NRQ5 SNORA20.2-201ENST00000383922 131 ntBASIC-3.06□□□□□ -2.9
SMCO4Q9NRQ5 RNU6-641P-201ENST00000384006 107 ntBASIC-3.06□□□□□ -2.9
SMCO4Q9NRQ5 AL158053.1-201ENST00000441503 453 ntBASIC-3.06□□□□□ -2.9
SMCO4Q9NRQ5 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-3.06□□□□□ -2.9
SMCO4Q9NRQ5 SNORA25.17-201ENST00000517184 124 ntBASIC-3.06□□□□□ -2.9
SMCO4Q9NRQ5 AC069503.3-201ENST00000618674 145 ntBASIC-3.06□□□□□ -2.9
SMCO4Q9NRQ5 Y_RNA.65-201ENST00000362846 100 ntBASIC-3.07□□□□□ -2.9
SMCO4Q9NRQ5 Y_RNA.180-201ENST00000363867 113 ntBASIC-3.07□□□□□ -2.9
SMCO4Q9NRQ5 RNA5SP237-201ENST00000410414 113 ntBASIC-3.07□□□□□ -2.9
SMCO4Q9NRQ5 RNU6-410P-201ENST00000517006 107 ntBASIC-3.07□□□□□ -2.9
SMCO4Q9NRQ5 AC109347.2-201ENST00000610220 349 ntBASIC-3.07□□□□□ -2.9
SMCO4Q9NRQ5 AL121757.2-201ENST00000611223 313 ntBASIC-3.07□□□□□ -2.9
SMCO4Q9NRQ5 MIR20A-201ENST00000362279 71 ntBASIC-3.08□□□□□ -2.9
SMCO4Q9NRQ5 SNORD18.1-201ENST00000363807 70 ntBASIC-3.08□□□□□ -2.9
SMCO4Q9NRQ5 Y_RNA.494-201ENST00000384432 111 ntBASIC-3.08□□□□□ -2.9
SMCO4Q9NRQ5 SNORA49-201ENST00000386157 136 ntBASIC-3.08□□□□□ -2.9
SMCO4Q9NRQ5 AL606845.1-201ENST00000404881 255 ntBASIC-3.08□□□□□ -2.9
SMCO4Q9NRQ5 RNU2-9P-201ENST00000410194 145 ntBASIC-3.08□□□□□ -2.9
SMCO4Q9NRQ5 RPL39P5-202ENST00000512505 151 ntBASIC-3.08□□□□□ -2.9
SMCO4Q9NRQ5 AC100767.1-201ENST00000528178 123 ntBASIC-3.08□□□□□ -2.9
SMCO4Q9NRQ5 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC-3.08□□□□□ -2.9
SMCO4Q9NRQ5 Y_RNA.413-201ENST00000384007 102 ntBASIC-3.09□□□□□ -2.9
SMCO4Q9NRQ5 Y_RNA.437-201ENST00000384113 113 ntBASIC-3.09□□□□□ -2.9
SMCO4Q9NRQ5 RNA5SP86-201ENST00000390869 98 ntBASIC-3.09□□□□□ -2.9
SMCO4Q9NRQ5 Y_RNA.598-201ENST00000410480 95 ntBASIC-3.09□□□□□ -2.9
SMCO4Q9NRQ5 RNU7-74P-201ENST00000459104 62 ntBASIC-3.09□□□□□ -2.9
SMCO4Q9NRQ5 Y_RNA.754-201ENST00000476024 102 ntBASIC-3.09□□□□□ -2.9
SMCO4Q9NRQ5 RNU6-966P-201ENST00000516479 104 ntBASIC-3.09□□□□□ -2.9
SMCO4Q9NRQ5 RNU6-1198P-201ENST00000516904 67 ntBASIC-3.09□□□□□ -2.9
SMCO4Q9NRQ5 AC245297.2-201ENST00000610119 565 ntBASIC-3.09□□□□□ -2.9
SMCO4Q9NRQ5 Y_RNA.790-201ENST00000614282 102 ntBASIC-3.09□□□□□ -2.9
SMCO4Q9NRQ5 Y_RNA.782-201ENST00000614695 102 ntBASIC-3.09□□□□□ -2.9
SMCO4Q9NRQ5 AP001282.2-201ENST00000616149 309 ntBASIC-3.09□□□□□ -2.9
SMCO4Q9NRQ5 Y_RNA.110-201ENST00000363220 99 ntBASIC-3.1□□□□□ -2.91
SMCO4Q9NRQ5 RNU6-792P-201ENST00000363490 107 ntBASIC-3.1□□□□□ -2.91
SMCO4Q9NRQ5 Y_RNA.247-201ENST00000364500 92 ntBASIC-3.1□□□□□ -2.91
SMCO4Q9NRQ5 Y_RNA.576-201ENST00000384781 102 ntBASIC-3.1□□□□□ -2.91
SMCO4Q9NRQ5 RNU6-1106P-201ENST00000390845 107 ntBASIC-3.1□□□□□ -2.91
SMCO4Q9NRQ5 MIR1468-201ENST00000410600 86 ntBASIC-3.1□□□□□ -2.91
SMCO4Q9NRQ5 RNU6-759P-201ENST00000516740 103 ntBASIC-3.1□□□□□ -2.91
SMCO4Q9NRQ5 YWHAEP2-201ENST00000580066 112 ntBASIC-3.1□□□□□ -2.91
SMCO4Q9NRQ5 PART1_1.1-201ENST00000611761 217 ntBASIC-3.1□□□□□ -2.91
SMCO4Q9NRQ5 Y_RNA.123-201ENST00000363338 102 ntBASIC-3.11□□□□□ -2.91
SMCO4Q9NRQ5 RNU6-179P-201ENST00000363350 107 ntBASIC-3.11□□□□□ -2.91
SMCO4Q9NRQ5 MIR558-201ENST00000384920 94 ntBASIC-3.11□□□□□ -2.91
SMCO4Q9NRQ5 MIR548H1-201ENST00000408610 102 ntBASIC-3.11□□□□□ -2.91
SMCO4Q9NRQ5 MTND3P9-201ENST00000429526 346 ntBASIC-3.11□□□□□ -2.91
SMCO4Q9NRQ5 AC098614.3-201ENST00000438957 440 ntBASIC-3.11□□□□□ -2.91
SMCO4Q9NRQ5 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-3.11□□□□□ -2.91
SMCO4Q9NRQ5 RNA5SP272-201ENST00000516095 111 ntBASIC-3.11□□□□□ -2.91
SMCO4Q9NRQ5 RNU6-201P-201ENST00000517100 61 ntBASIC-3.12□□□□□ -2.91
SMCO4Q9NRQ5 AC002044.1-201ENST00000606707 158 ntBASIC-3.12□□□□□ -2.91
SMCO4Q9NRQ5 AC072046.2-201ENST00000618366 268 ntBASIC-3.12□□□□□ -2.91
SMCO4Q9NRQ5 RNU6-412P-201ENST00000516434 106 ntBASIC-3.14□□□□□ -2.91
SMCO4Q9NRQ5 RNU7-53P-201ENST00000516705 60 ntBASIC-3.14□□□□□ -2.91
SMCO4Q9NRQ5 MTND4LP25-201ENST00000570218 163 ntBASIC-3.14□□□□□ -2.91
SMCO4Q9NRQ5 AC008507.2-201ENST00000588402 1176 ntBASIC-3.14□□□□□ -2.91
Retrieved 100 of 98,524 protein–RNA pairs in 240.3 ms