Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 AC092991.1-201ENST00000477176 376 ntBASIC1.47□□□□□ -2.17
HINT3Q9NQE9 RNU6-1007P-201ENST00000516586 107 ntBASIC1.47□□□□□ -2.17
HINT3Q9NQE9 AC008507.4-201ENST00000585464 127 ntBASIC1.47□□□□□ -2.17
HINT3Q9NQE9 AL353997.5-201ENST00000618886 171 ntBASIC1.47□□□□□ -2.17
HINT3Q9NQE9 WWP1P1-201ENST00000466609 2769 ntBASIC1.46□□□□□ -2.18
HINT3Q9NQE9 RNU6-653P-201ENST00000363074 106 ntBASIC1.46□□□□□ -2.18
HINT3Q9NQE9 SNORD14E-201ENST00000364009 85 ntBASIC1.46□□□□□ -2.18
HINT3Q9NQE9 Y_RNA.229-201ENST00000364347 113 ntBASIC1.46□□□□□ -2.18
HINT3Q9NQE9 Y_RNA.262-201ENST00000364641 102 ntBASIC1.46□□□□□ -2.18
HINT3Q9NQE9 Y_RNA.489-201ENST00000384410 101 ntBASIC1.46□□□□□ -2.18
HINT3Q9NQE9 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.46□□□□□ -2.18
HINT3Q9NQE9 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.46□□□□□ -2.18
HINT3Q9NQE9 AC027119.1-201ENST00000440877 241 ntBASIC1.46□□□□□ -2.18
HINT3Q9NQE9 HMGN2P32-201ENST00000444648 269 ntBASIC1.46□□□□□ -2.18
HINT3Q9NQE9 RNU4-71P-201ENST00000516258 113 ntBASIC1.46□□□□□ -2.18
HINT3Q9NQE9 RNU6-1271P-201ENST00000517049 105 ntBASIC1.46□□□□□ -2.18
HINT3Q9NQE9 AC019176.1-201ENST00000518519 225 ntBASIC1.46□□□□□ -2.18
HINT3Q9NQE9 CBX3P4-201ENST00000538909 354 ntBASIC1.46□□□□□ -2.18
HINT3Q9NQE9 MIR3683-201ENST00000580847 82 ntBASIC1.46□□□□□ -2.18
HINT3Q9NQE9 MIR4422-201ENST00000581938 83 ntBASIC1.46□□□□□ -2.18
HINT3Q9NQE9 AL049861.1-201ENST00000603130 150 ntBASIC1.46□□□□□ -2.18
HINT3Q9NQE9 uc_338.4-201ENST00000616635 176 ntBASIC1.46□□□□□ -2.18
HINT3Q9NQE9 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.46□□□□□ -2.18
HINT3Q9NQE9 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
HINT3Q9NQE9 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
HINT3Q9NQE9 Y_RNA.336-201ENST00000365307 109 ntBASIC1.45□□□□□ -2.18
HINT3Q9NQE9 MIR452-201ENST00000385020 85 ntBASIC1.45□□□□□ -2.18
HINT3Q9NQE9 MT-TG-201ENST00000387429 68 ntBASIC1.45□□□□□ -2.18
HINT3Q9NQE9 RNU6-482P-201ENST00000391068 107 ntBASIC1.45□□□□□ -2.18
HINT3Q9NQE9 MIR1298-201ENST00000408783 112 ntBASIC1.45□□□□□ -2.18
HINT3Q9NQE9 RNU6-917P-201ENST00000516294 104 ntBASIC1.45□□□□□ -2.18
HINT3Q9NQE9 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.45□□□□□ -2.18
HINT3Q9NQE9 MIR4285-201ENST00000581001 85 ntBASIC1.45□□□□□ -2.18
HINT3Q9NQE9 snoU2_19.4-201ENST00000364329 80 ntBASIC1.44□□□□□ -2.18
HINT3Q9NQE9 RNA5SP190-201ENST00000365222 118 ntBASIC1.44□□□□□ -2.18
HINT3Q9NQE9 SNORA2.2-201ENST00000365473 135 ntBASIC1.44□□□□□ -2.18
HINT3Q9NQE9 MIR526A1-201ENST00000384897 85 ntBASIC1.44□□□□□ -2.18
HINT3Q9NQE9 MIR653-201ENST00000385279 96 ntBASIC1.44□□□□□ -2.18
HINT3Q9NQE9 MIR802-201ENST00000390235 94 ntBASIC1.44□□□□□ -2.18
HINT3Q9NQE9 SNORD72-201ENST00000390994 80 ntBASIC1.44□□□□□ -2.18
HINT3Q9NQE9 SNX2P2-201ENST00000424553 323 ntBASIC1.44□□□□□ -2.18
HINT3Q9NQE9 AC245517.4-201ENST00000448601 281 ntBASIC1.44□□□□□ -2.18
HINT3Q9NQE9 RNA5SP445-201ENST00000515889 115 ntBASIC1.44□□□□□ -2.18
HINT3Q9NQE9 RNU7-149P-201ENST00000516739 59 ntBASIC1.44□□□□□ -2.18
HINT3Q9NQE9 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.44□□□□□ -2.18
HINT3Q9NQE9 MIR3937-201ENST00000580135 106 ntBASIC1.44□□□□□ -2.18
HINT3Q9NQE9 MIR4769-201ENST00000584126 77 ntBASIC1.44□□□□□ -2.18
HINT3Q9NQE9 RNU1-17P-201ENST00000363022 152 ntBASIC1.43□□□□□ -2.18
HINT3Q9NQE9 RNA5SP99-201ENST00000364020 114 ntBASIC1.43□□□□□ -2.18
HINT3Q9NQE9 RNY1-201ENST00000364228 113 ntBASIC1.43□□□□□ -2.18
HINT3Q9NQE9 Y_RNA.242-201ENST00000364473 110 ntBASIC1.43□□□□□ -2.18
HINT3Q9NQE9 RNU6-442P-201ENST00000383968 104 ntBASIC1.43□□□□□ -2.18
HINT3Q9NQE9 RNU6-1065P-201ENST00000384513 106 ntBASIC1.43□□□□□ -2.18
HINT3Q9NQE9 Y_RNA.587-201ENST00000391210 103 ntBASIC1.43□□□□□ -2.18
HINT3Q9NQE9 RNU6-381P-201ENST00000391259 108 ntBASIC1.43□□□□□ -2.18
HINT3Q9NQE9 Y_RNA.626-201ENST00000411288 95 ntBASIC1.43□□□□□ -2.18
HINT3Q9NQE9 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.43□□□□□ -2.18
HINT3Q9NQE9 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.43□□□□□ -2.18
HINT3Q9NQE9 AC245047.8-201ENST00000456455 284 ntBASIC1.43□□□□□ -2.18
HINT3Q9NQE9 COX6CP14-201ENST00000469580 174 ntBASIC1.43□□□□□ -2.18
HINT3Q9NQE9 AC090049.2-201ENST00000550377 109 ntBASIC1.43□□□□□ -2.18
HINT3Q9NQE9 MIR4255-201ENST00000579351 72 ntBASIC1.43□□□□□ -2.18
HINT3Q9NQE9 AP000942.4-201ENST00000604811 241 ntBASIC1.43□□□□□ -2.18
HINT3Q9NQE9 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HINT3Q9NQE9 RNU4-17P-201ENST00000365598 141 ntBASIC1.42□□□□□ -2.18
HINT3Q9NQE9 RPS27P16-201ENST00000425758 201 ntBASIC1.42□□□□□ -2.18
HINT3Q9NQE9 SNRPGP14-201ENST00000435400 219 ntBASIC1.42□□□□□ -2.18
HINT3Q9NQE9 SCARNA8-201ENST00000515924 131 ntBASIC1.42□□□□□ -2.18
HINT3Q9NQE9 RNU6-237P-201ENST00000515985 71 ntBASIC1.42□□□□□ -2.18
HINT3Q9NQE9 SNORD77.4-201ENST00000516158 81 ntBASIC1.42□□□□□ -2.18
HINT3Q9NQE9 RNY3P16-201ENST00000516338 101 ntBASIC1.42□□□□□ -2.18
HINT3Q9NQE9 RNU6-902P-201ENST00000517212 91 ntBASIC1.42□□□□□ -2.18
HINT3Q9NQE9 AC090142.3-201ENST00000519012 385 ntBASIC1.42□□□□□ -2.18
HINT3Q9NQE9 FAM106DP-201ENST00000586416 501 ntBASIC1.42□□□□□ -2.18
HINT3Q9NQE9 AL513534.2-201ENST00000603836 250 ntBASIC1.42□□□□□ -2.18
HINT3Q9NQE9 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
HINT3Q9NQE9 RNU6-379P-201ENST00000363813 104 ntBASIC1.41□□□□□ -2.18
HINT3Q9NQE9 Y_RNA.308-201ENST00000365043 101 ntBASIC1.41□□□□□ -2.18
HINT3Q9NQE9 RNU6-1138P-201ENST00000365359 106 ntBASIC1.41□□□□□ -2.18
HINT3Q9NQE9 MIR516B2-201ENST00000385190 85 ntBASIC1.41□□□□□ -2.18
HINT3Q9NQE9 MIR616-201ENST00000385293 97 ntBASIC1.41□□□□□ -2.18
HINT3Q9NQE9 MIR320A-201ENST00000385302 82 ntBASIC1.41□□□□□ -2.18
HINT3Q9NQE9 MT-TT-201ENST00000387460 66 ntBASIC1.41□□□□□ -2.18
HINT3Q9NQE9 AC015922.2-201ENST00000435593 184 ntBASIC1.41□□□□□ -2.18
HINT3Q9NQE9 SNORD13-201ENST00000459299 104 ntBASIC1.41□□□□□ -2.18
HINT3Q9NQE9 RNU6-322P-201ENST00000516010 103 ntBASIC1.41□□□□□ -2.18
HINT3Q9NQE9 RNU6-922P-201ENST00000516753 99 ntBASIC1.41□□□□□ -2.18
HINT3Q9NQE9 RNU6-453P-201ENST00000516819 85 ntBASIC1.41□□□□□ -2.18
HINT3Q9NQE9 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.41□□□□□ -2.18
HINT3Q9NQE9 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
HINT3Q9NQE9 Y_RNA.199-201ENST00000364014 102 ntBASIC1.4□□□□□ -2.19
HINT3Q9NQE9 RNU6-268P-201ENST00000364174 107 ntBASIC1.4□□□□□ -2.19
HINT3Q9NQE9 Y_RNA.476-201ENST00000384347 108 ntBASIC1.4□□□□□ -2.19
HINT3Q9NQE9 MIR136-201ENST00000385207 82 ntBASIC1.4□□□□□ -2.19
HINT3Q9NQE9 RN7SKP164-201ENST00000516138 266 ntBASIC1.4□□□□□ -2.19
HINT3Q9NQE9 AL391903.3-201ENST00000612158 163 ntBASIC1.4□□□□□ -2.19
HINT3Q9NQE9 Pinc.1-201ENST00000616452 154 ntBASIC1.4□□□□□ -2.19
HINT3Q9NQE9 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.4□□□□□ -2.19
HINT3Q9NQE9 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
HINT3Q9NQE9 AL442644.1-201ENST00000454390 3105 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms