Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AL513534.2-201ENST00000603836 250 ntBASIC3.81□□□□□ -1.8
RTN4Q9NQC3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RTN4Q9NQC3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RTN4Q9NQC3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.8□□□□□ -1.8
RTN4Q9NQC3 SNORA51.10-201ENST00000384418 136 ntBASIC3.8□□□□□ -1.8
RTN4Q9NQC3 Y_RNA.630-201ENST00000411370 108 ntBASIC3.8□□□□□ -1.8
RTN4Q9NQC3 RNU7-164P-201ENST00000459221 62 ntBASIC3.8□□□□□ -1.8
RTN4Q9NQC3 AP004217.1-201ENST00000480579 346 ntBASIC3.8□□□□□ -1.8
RTN4Q9NQC3 RNA5SP82-201ENST00000516707 92 ntBASIC3.8□□□□□ -1.8
RTN4Q9NQC3 RNU6-958P-201ENST00000516995 106 ntBASIC3.8□□□□□ -1.8
RTN4Q9NQC3 U4.6-201ENST00000621618 127 ntBASIC3.8□□□□□ -1.8
RTN4Q9NQC3 AC106754.2-201ENST00000623006 233 ntBASIC3.8□□□□□ -1.8
RTN4Q9NQC3 AC021613.1-201ENST00000623880 111 ntBASIC3.8□□□□□ -1.8
RTN4Q9NQC3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RTN4Q9NQC3 Y_RNA.81-201ENST00000362997 102 ntBASIC3.79□□□□□ -1.8
RTN4Q9NQC3 Y_RNA.198-201ENST00000364013 98 ntBASIC3.79□□□□□ -1.8
RTN4Q9NQC3 RN7SKP27-201ENST00000410684 333 ntBASIC3.79□□□□□ -1.8
RTN4Q9NQC3 AL022718.1-201ENST00000412004 84 ntBASIC3.79□□□□□ -1.8
RTN4Q9NQC3 snoU13.16-201ENST00000459350 104 ntBASIC3.79□□□□□ -1.8
RTN4Q9NQC3 RNU6-917P-201ENST00000516294 104 ntBASIC3.79□□□□□ -1.8
RTN4Q9NQC3 MIR4791-201ENST00000607666 84 ntBASIC3.79□□□□□ -1.8
RTN4Q9NQC3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.79□□□□□ -1.8
RTN4Q9NQC3 AP000648.3-201ENST00000623539 4507 ntBASIC3.79□□□□□ -1.8
RTN4Q9NQC3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.79□□□□□ -1.8
RTN4Q9NQC3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
RTN4Q9NQC3 SNORD33-201ENST00000362761 85 ntBASIC3.78□□□□□ -1.8
RTN4Q9NQC3 Y_RNA.298-201ENST00000364960 107 ntBASIC3.78□□□□□ -1.8
RTN4Q9NQC3 SNORD116-21-201ENST00000384507 92 ntBASIC3.78□□□□□ -1.8
RTN4Q9NQC3 RNU6-880P-201ENST00000384526 107 ntBASIC3.78□□□□□ -1.8
RTN4Q9NQC3 MIR520C-201ENST00000385005 87 ntBASIC3.78□□□□□ -1.8
RTN4Q9NQC3 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.78□□□□□ -1.8
RTN4Q9NQC3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.78□□□□□ -1.8
RTN4Q9NQC3 IGKV1-22-201ENST00000524313 326 ntBASIC3.78□□□□□ -1.8
RTN4Q9NQC3 MIR5685-201ENST00000579080 79 ntBASIC3.78□□□□□ -1.8
RTN4Q9NQC3 AC010297.1-201ENST00000623948 149 ntBASIC3.78□□□□□ -1.8
RTN4Q9NQC3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.78□□□□□ -1.8
RTN4Q9NQC3 WWP1P1-201ENST00000466609 2769 ntBASIC3.78□□□□□ -1.8
RTN4Q9NQC3 Y_RNA.494-201ENST00000384432 111 ntBASIC3.77□□□□□ -1.81
RTN4Q9NQC3 RNU6-1319P-201ENST00000390855 104 ntBASIC3.77□□□□□ -1.81
RTN4Q9NQC3 RNU6-747P-201ENST00000390928 104 ntBASIC3.77□□□□□ -1.81
RTN4Q9NQC3 RNU6-241P-201ENST00000391148 104 ntBASIC3.77□□□□□ -1.81
RTN4Q9NQC3 SNORA11-201ENST00000408789 128 ntBASIC3.77□□□□□ -1.81
RTN4Q9NQC3 RNU6-177P-201ENST00000411257 104 ntBASIC3.77□□□□□ -1.81
RTN4Q9NQC3 ATP5A1P2-201ENST00000412323 255 ntBASIC3.77□□□□□ -1.81
RTN4Q9NQC3 RPS29P7-201ENST00000439662 171 ntBASIC3.77□□□□□ -1.81
RTN4Q9NQC3 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.77□□□□□ -1.81
RTN4Q9NQC3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC3.77□□□□□ -1.81
RTN4Q9NQC3 MIR4764-201ENST00000580680 88 ntBASIC3.77□□□□□ -1.81
RTN4Q9NQC3 AL627230.6-201ENST00000611129 280 ntBASIC3.77□□□□□ -1.81
RTN4Q9NQC3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RTN4Q9NQC3 AC096644.4-201ENST00000563417 2912 ntBASIC3.77□□□□□ -1.81
RTN4Q9NQC3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.76□□□□□ -1.81
RTN4Q9NQC3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RTN4Q9NQC3 AL035461.1-201ENST00000421490 332 ntBASIC3.76□□□□□ -1.81
RTN4Q9NQC3 RNU6-412P-201ENST00000516434 106 ntBASIC3.76□□□□□ -1.81
RTN4Q9NQC3 AC074050.1-201ENST00000563247 211 ntBASIC3.76□□□□□ -1.81
RTN4Q9NQC3 AC073476.4-201ENST00000628409 72 ntBASIC3.76□□□□□ -1.81
RTN4Q9NQC3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.76□□□□□ -1.81
RTN4Q9NQC3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
RTN4Q9NQC3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
RTN4Q9NQC3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
RTN4Q9NQC3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.75□□□□□ -1.81
RTN4Q9NQC3 RNY4P20-201ENST00000516678 93 ntBASIC3.75□□□□□ -1.81
RTN4Q9NQC3 AC034229.5-201ENST00000624258 185 ntBASIC3.75□□□□□ -1.81
RTN4Q9NQC3 RNY4P6-201ENST00000363667 96 ntBASIC3.74□□□□□ -1.81
RTN4Q9NQC3 MIR554-201ENST00000384874 96 ntBASIC3.74□□□□□ -1.81
RTN4Q9NQC3 SNORD28B-201ENST00000390993 75 ntBASIC3.74□□□□□ -1.81
RTN4Q9NQC3 RN7SL633P-201ENST00000488974 297 ntBASIC3.74□□□□□ -1.81
RTN4Q9NQC3 RNA5SP356-201ENST00000515972 94 ntBASIC3.74□□□□□ -1.81
RTN4Q9NQC3 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.74□□□□□ -1.81
RTN4Q9NQC3 AC008133.2-201ENST00000624540 351 ntBASIC3.74□□□□□ -1.81
RTN4Q9NQC3 SCARNA4.1-201ENST00000628597 123 ntBASIC3.74□□□□□ -1.81
RTN4Q9NQC3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
RTN4Q9NQC3 MIR30A-201ENST00000385092 71 ntBASIC3.73□□□□□ -1.81
RTN4Q9NQC3 RNU2-52P-201ENST00000410680 190 ntBASIC3.73□□□□□ -1.81
RTN4Q9NQC3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
RTN4Q9NQC3 AC015688.6-201ENST00000577737 104 ntBASIC3.73□□□□□ -1.81
RTN4Q9NQC3 AC095038.3-201ENST00000634439 195 ntBASIC3.73□□□□□ -1.81
RTN4Q9NQC3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RTN4Q9NQC3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RTN4Q9NQC3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
RTN4Q9NQC3 RNU6-439P-201ENST00000384188 106 ntBASIC3.72□□□□□ -1.81
RTN4Q9NQC3 snoU13.9-201ENST00000458927 103 ntBASIC3.72□□□□□ -1.81
RTN4Q9NQC3 AC121758.2-201ENST00000553271 193 ntBASIC3.72□□□□□ -1.81
RTN4Q9NQC3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RTN4Q9NQC3 Y_RNA.299-201ENST00000364973 94 ntBASIC3.71□□□□□ -1.82
RTN4Q9NQC3 SNORA62.3-201ENST00000365110 153 ntBASIC3.71□□□□□ -1.82
RTN4Q9NQC3 MIR23B-201ENST00000384832 97 ntBASIC3.71□□□□□ -1.82
RTN4Q9NQC3 SNORD105B-201ENST00000458770 79 ntBASIC3.71□□□□□ -1.82
RTN4Q9NQC3 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.71□□□□□ -1.82
RTN4Q9NQC3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.71□□□□□ -1.82
RTN4Q9NQC3 SNORA77B-201ENST00000578179 125 ntBASIC3.71□□□□□ -1.82
RTN4Q9NQC3 MIR6129-201ENST00000616087 109 ntBASIC3.71□□□□□ -1.82
RTN4Q9NQC3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RTN4Q9NQC3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.71□□□□□ -1.82
RTN4Q9NQC3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
RTN4Q9NQC3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RTN4Q9NQC3 Y_RNA.354-201ENST00000365448 111 ntBASIC3.7□□□□□ -1.82
RTN4Q9NQC3 Y_RNA.430-201ENST00000384081 110 ntBASIC3.7□□□□□ -1.82
RTN4Q9NQC3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms