Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 AL160004.2-201ENST00000432935 350 ntBASIC0.4□□□□□ -2.35
EXOSC4Q9NPD3 RNU7-141P-201ENST00000459304 62 ntBASIC0.4□□□□□ -2.35
EXOSC4Q9NPD3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.4□□□□□ -2.35
EXOSC4Q9NPD3 MIR151B-201ENST00000584249 96 ntBASIC0.4□□□□□ -2.35
EXOSC4Q9NPD3 AC008507.4-201ENST00000585464 127 ntBASIC0.4□□□□□ -2.35
EXOSC4Q9NPD3 RPS29P30-201ENST00000600975 111 ntBASIC0.4□□□□□ -2.35
EXOSC4Q9NPD3 MIR4791-201ENST00000607666 84 ntBASIC0.4□□□□□ -2.35
EXOSC4Q9NPD3 AC007742.2-201ENST00000618226 398 ntBASIC0.4□□□□□ -2.35
EXOSC4Q9NPD3 MTND1P7-201ENST00000632801 297 ntBASIC0.4□□□□□ -2.35
EXOSC4Q9NPD3 AL442644.1-201ENST00000454390 3105 ntBASIC0.4□□□□□ -2.35
EXOSC4Q9NPD3 Y_RNA.5-201ENST00000362334 102 ntBASIC0.39□□□□□ -2.35
EXOSC4Q9NPD3 RNU6-1115P-201ENST00000362490 106 ntBASIC0.39□□□□□ -2.35
EXOSC4Q9NPD3 RNU4-80P-201ENST00000363200 141 ntBASIC0.39□□□□□ -2.35
EXOSC4Q9NPD3 RNU6-801P-201ENST00000364087 105 ntBASIC0.39□□□□□ -2.35
EXOSC4Q9NPD3 Y_RNA.383-201ENST00000383855 97 ntBASIC0.39□□□□□ -2.35
EXOSC4Q9NPD3 SNORA51.10-201ENST00000384418 136 ntBASIC0.39□□□□□ -2.35
EXOSC4Q9NPD3 Y_RNA.551-201ENST00000384661 102 ntBASIC0.39□□□□□ -2.35
EXOSC4Q9NPD3 RNU6-1067P-201ENST00000384752 107 ntBASIC0.39□□□□□ -2.35
EXOSC4Q9NPD3 RNU6-205P-201ENST00000390858 107 ntBASIC0.39□□□□□ -2.35
EXOSC4Q9NPD3 RNU6-613P-201ENST00000410412 108 ntBASIC0.39□□□□□ -2.35
EXOSC4Q9NPD3 AC114737.2-201ENST00000421583 173 ntBASIC0.39□□□□□ -2.35
EXOSC4Q9NPD3 AC024067.1-201ENST00000426199 223 ntBASIC0.39□□□□□ -2.35
EXOSC4Q9NPD3 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.39□□□□□ -2.35
EXOSC4Q9NPD3 RNU6-437P-201ENST00000459408 95 ntBASIC0.39□□□□□ -2.35
EXOSC4Q9NPD3 RNU6-830P-201ENST00000516353 107 ntBASIC0.39□□□□□ -2.35
EXOSC4Q9NPD3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.39□□□□□ -2.35
EXOSC4Q9NPD3 UBE2V2P2-201ENST00000587677 504 ntBASIC0.39□□□□□ -2.35
EXOSC4Q9NPD3 AL080274.1-201ENST00000605565 220 ntBASIC0.39□□□□□ -2.35
EXOSC4Q9NPD3 AL121655.1-201ENST00000605811 308 ntBASIC0.39□□□□□ -2.35
EXOSC4Q9NPD3 AL136317.1-201ENST00000612653 226 ntBASIC0.39□□□□□ -2.35
EXOSC4Q9NPD3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.38□□□□□ -2.35
EXOSC4Q9NPD3 RNU6-369P-201ENST00000362515 102 ntBASIC0.38□□□□□ -2.35
EXOSC4Q9NPD3 Y_RNA.39-201ENST00000362620 98 ntBASIC0.38□□□□□ -2.35
EXOSC4Q9NPD3 RNU4-50P-201ENST00000364361 141 ntBASIC0.38□□□□□ -2.35
EXOSC4Q9NPD3 RNU6-396P-201ENST00000365369 105 ntBASIC0.38□□□□□ -2.35
EXOSC4Q9NPD3 Y_RNA.370-201ENST00000365589 108 ntBASIC0.38□□□□□ -2.35
EXOSC4Q9NPD3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
EXOSC4Q9NPD3 Y_RNA.439-201ENST00000384119 94 ntBASIC0.38□□□□□ -2.35
EXOSC4Q9NPD3 RNU6-21P-201ENST00000384710 107 ntBASIC0.38□□□□□ -2.35
EXOSC4Q9NPD3 SNORA26.5-201ENST00000391215 123 ntBASIC0.38□□□□□ -2.35
EXOSC4Q9NPD3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.38□□□□□ -2.35
EXOSC4Q9NPD3 RNU6-130P-201ENST00000411112 103 ntBASIC0.38□□□□□ -2.35
EXOSC4Q9NPD3 MIR2115-201ENST00000516657 100 ntBASIC0.38□□□□□ -2.35
EXOSC4Q9NPD3 AC018659.1-201ENST00000551083 169 ntBASIC0.38□□□□□ -2.35
EXOSC4Q9NPD3 MIR5000-201ENST00000577717 103 ntBASIC0.38□□□□□ -2.35
EXOSC4Q9NPD3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.38□□□□□ -2.35
EXOSC4Q9NPD3 AC104695.3-201ENST00000604052 296 ntBASIC0.38□□□□□ -2.35
EXOSC4Q9NPD3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.38□□□□□ -2.35
EXOSC4Q9NPD3 AL606534.2-204ENST00000635008 178 ntBASIC0.38□□□□□ -2.35
EXOSC4Q9NPD3 Y_RNA.58-201ENST00000362807 102 ntBASIC0.37□□□□□ -2.35
EXOSC4Q9NPD3 SNORA72.1-201ENST00000363485 129 ntBASIC0.37□□□□□ -2.35
EXOSC4Q9NPD3 Y_RNA.154-201ENST00000363624 102 ntBASIC0.37□□□□□ -2.35
EXOSC4Q9NPD3 SNORD45.3-201ENST00000363836 72 ntBASIC0.37□□□□□ -2.35
EXOSC4Q9NPD3 RNA5SP499-201ENST00000363982 119 ntBASIC0.37□□□□□ -2.35
EXOSC4Q9NPD3 RNY3P1-201ENST00000365085 102 ntBASIC0.37□□□□□ -2.35
EXOSC4Q9NPD3 RNU6-1283P-201ENST00000365314 105 ntBASIC0.37□□□□□ -2.35
EXOSC4Q9NPD3 RNY3-201ENST00000365484 102 ntBASIC0.37□□□□□ -2.35
EXOSC4Q9NPD3 SNORA72.4-201ENST00000384174 132 ntBASIC0.37□□□□□ -2.35
EXOSC4Q9NPD3 Y_RNA.529-201ENST00000384586 119 ntBASIC0.37□□□□□ -2.35
EXOSC4Q9NPD3 SNORD83.1-201ENST00000411362 77 ntBASIC0.37□□□□□ -2.35
EXOSC4Q9NPD3 AC092628.1-201ENST00000436250 252 ntBASIC0.37□□□□□ -2.35
EXOSC4Q9NPD3 RNU7-152P-201ENST00000458982 64 ntBASIC0.37□□□□□ -2.35
EXOSC4Q9NPD3 SNORD19B-201ENST00000459623 84 ntBASIC0.37□□□□□ -2.35
EXOSC4Q9NPD3 RNU6-229P-201ENST00000516614 102 ntBASIC0.37□□□□□ -2.35
EXOSC4Q9NPD3 AC087685.1-201ENST00000587507 141 ntBASIC0.37□□□□□ -2.35
EXOSC4Q9NPD3 PART1_1.1-201ENST00000611761 217 ntBASIC0.37□□□□□ -2.35
EXOSC4Q9NPD3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.37□□□□□ -2.35
EXOSC4Q9NPD3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.37□□□□□ -2.35
EXOSC4Q9NPD3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
EXOSC4Q9NPD3 Y_RNA.168-201ENST00000363740 102 ntBASIC0.36□□□□□ -2.35
EXOSC4Q9NPD3 Y_RNA.303-201ENST00000364998 94 ntBASIC0.36□□□□□ -2.35
EXOSC4Q9NPD3 SNORD63-201ENST00000384262 68 ntBASIC0.36□□□□□ -2.35
EXOSC4Q9NPD3 Y_RNA.471-201ENST00000384312 102 ntBASIC0.36□□□□□ -2.35
EXOSC4Q9NPD3 Y_RNA.494-201ENST00000384432 111 ntBASIC0.36□□□□□ -2.35
EXOSC4Q9NPD3 RNU6-125P-201ENST00000384505 107 ntBASIC0.36□□□□□ -2.35
EXOSC4Q9NPD3 Y_RNA.537-201ENST00000384626 109 ntBASIC0.36□□□□□ -2.35
EXOSC4Q9NPD3 AC090844.1-201ENST00000422019 156 ntBASIC0.36□□□□□ -2.35
EXOSC4Q9NPD3 POLR2KP2-201ENST00000438155 177 ntBASIC0.36□□□□□ -2.35
EXOSC4Q9NPD3 SNORD11-201ENST00000459124 84 ntBASIC0.36□□□□□ -2.35
EXOSC4Q9NPD3 U8.20-201ENST00000459445 131 ntBASIC0.36□□□□□ -2.35
EXOSC4Q9NPD3 RNU4-57P-201ENST00000515980 135 ntBASIC0.36□□□□□ -2.35
EXOSC4Q9NPD3 RNU6-1046P-201ENST00000516538 107 ntBASIC0.36□□□□□ -2.35
EXOSC4Q9NPD3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.36□□□□□ -2.35
EXOSC4Q9NPD3 MIR2681-201ENST00000581814 105 ntBASIC0.36□□□□□ -2.35
EXOSC4Q9NPD3 AC005357.1-201ENST00000588399 301 ntBASIC0.36□□□□□ -2.35
EXOSC4Q9NPD3 AC006157.1-201ENST00000611750 366 ntBASIC0.36□□□□□ -2.35
EXOSC4Q9NPD3 AC243994.1-201ENST00000618627 109 ntBASIC0.36□□□□□ -2.35
EXOSC4Q9NPD3 RNU6-674P-201ENST00000363831 107 ntBASIC0.35□□□□□ -2.35
EXOSC4Q9NPD3 Y_RNA.252-201ENST00000364556 101 ntBASIC0.35□□□□□ -2.35
EXOSC4Q9NPD3 RNU6-934P-201ENST00000365154 107 ntBASIC0.35□□□□□ -2.35
EXOSC4Q9NPD3 Y_RNA.356-201ENST00000365475 113 ntBASIC0.35□□□□□ -2.35
EXOSC4Q9NPD3 RNU6-1237P-201ENST00000384777 107 ntBASIC0.35□□□□□ -2.35
EXOSC4Q9NPD3 MIR499A-201ENST00000384903 122 ntBASIC0.35□□□□□ -2.35
EXOSC4Q9NPD3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.35□□□□□ -2.35
EXOSC4Q9NPD3 AC244023.1-201ENST00000426884 112 ntBASIC0.35□□□□□ -2.35
EXOSC4Q9NPD3 RNU6-507P-201ENST00000516045 100 ntBASIC0.35□□□□□ -2.35
EXOSC4Q9NPD3 SNORA40.14-201ENST00000516543 86 ntBASIC0.35□□□□□ -2.35
EXOSC4Q9NPD3 AC242498.1-201ENST00000604134 111 ntBASIC0.35□□□□□ -2.35
EXOSC4Q9NPD3 AC006441.5-201ENST00000612680 209 ntBASIC0.35□□□□□ -2.35
EXOSC4Q9NPD3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms