Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 SNORD114-9-201ENST00000364370 72 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 U8.7-201ENST00000364940 136 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 Y_RNA.453-201ENST00000384223 109 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 RNU6-747P-201ENST00000390928 104 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 RNU6-241P-201ENST00000391148 104 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 MIR1257-201ENST00000408490 117 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 MIR1278-201ENST00000408753 81 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 RNU6-447P-201ENST00000410293 104 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 RNU6-355P-201ENST00000410427 104 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 RNU6-791P-201ENST00000410467 104 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 RNU6-705P-201ENST00000410601 104 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 RNU6-860P-201ENST00000410860 104 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 RNU6-785P-201ENST00000411324 104 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 MIR18B-201ENST00000454574 71 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 SNORD11-201ENST00000459124 84 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 RNU6-437P-201ENST00000459408 95 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 RNU7-169P-201ENST00000459456 61 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 RNU7-4P-201ENST00000516961 62 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 AC133485.4-201ENST00000561835 220 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 RPL23AP91-201ENST00000569211 455 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 MIR2681-201ENST00000581814 105 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 SNORA4-201ENST00000584302 138 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 SNORD92-201ENST00000585078 85 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 DEFB117-201ENST00000602356 141 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 AL355297.3-201ENST00000604082 446 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 U6.90-201ENST00000614007 104 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 AC048344.4-201ENST00000619744 527 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 U6.70-201ENST00000620287 104 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 UGP2-230ENST00000626380 276 ntTSL 5 BASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 U6.92-201ENST00000636464 89 ntBASIC-0.05□□□□□ -2.42
VCX3AQ9NNX9 MIR411-201ENST00000362239 96 ntBASIC-0.06□□□□□ -2.42
VCX3AQ9NNX9 RNA5SP214-201ENST00000363378 118 ntBASIC-0.06□□□□□ -2.42
VCX3AQ9NNX9 SNORA36.1-201ENST00000363424 132 ntBASIC-0.06□□□□□ -2.42
VCX3AQ9NNX9 RNY3P11-201ENST00000364153 102 ntBASIC-0.06□□□□□ -2.42
VCX3AQ9NNX9 MIR518F-201ENST00000384973 87 ntBASIC-0.06□□□□□ -2.42
VCX3AQ9NNX9 SNORD115-47-201ENST00000391226 86 ntBASIC-0.06□□□□□ -2.42
VCX3AQ9NNX9 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.06□□□□□ -2.42
VCX3AQ9NNX9 Y_RNA.599-201ENST00000410489 109 ntBASIC-0.06□□□□□ -2.42
VCX3AQ9NNX9 AC236972.2-201ENST00000434979 310 ntBASIC-0.06□□□□□ -2.42
VCX3AQ9NNX9 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-0.06□□□□□ -2.42
VCX3AQ9NNX9 RNU7-185P-201ENST00000459215 60 ntBASIC-0.06□□□□□ -2.42
VCX3AQ9NNX9 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-0.06□□□□□ -2.42
VCX3AQ9NNX9 RNU7-25P-201ENST00000516544 62 ntBASIC-0.06□□□□□ -2.42
VCX3AQ9NNX9 RNU7-156P-201ENST00000517214 74 ntBASIC-0.06□□□□□ -2.42
VCX3AQ9NNX9 MIR4423-201ENST00000580922 80 ntBASIC-0.06□□□□□ -2.42
VCX3AQ9NNX9 AL078603.1-201ENST00000603824 313 ntBASIC-0.06□□□□□ -2.42
VCX3AQ9NNX9 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.06□□□□□ -2.42
VCX3AQ9NNX9 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC-0.06□□□□□ -2.42
VCX3AQ9NNX9 U4.5-201ENST00000617137 123 ntBASIC-0.06□□□□□ -2.42
VCX3AQ9NNX9 RNU6-674P-201ENST00000363831 107 ntBASIC-0.07□□□□□ -2.42
VCX3AQ9NNX9 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.07□□□□□ -2.42
VCX3AQ9NNX9 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.07□□□□□ -2.42
VCX3AQ9NNX9 MIR628-201ENST00000385229 95 ntBASIC-0.07□□□□□ -2.42
VCX3AQ9NNX9 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.07□□□□□ -2.42
VCX3AQ9NNX9 SEPT7P4-201ENST00000437076 306 ntBASIC-0.07□□□□□ -2.42
VCX3AQ9NNX9 RNU6-1132P-201ENST00000459214 107 ntBASIC-0.07□□□□□ -2.42
VCX3AQ9NNX9 RNU6-448P-201ENST00000517052 107 ntBASIC-0.07□□□□□ -2.42
VCX3AQ9NNX9 AC144568.1-201ENST00000520139 137 ntBASIC-0.07□□□□□ -2.42
VCX3AQ9NNX9 AP003327.1-201ENST00000529684 127 ntBASIC-0.07□□□□□ -2.42
VCX3AQ9NNX9 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.07□□□□□ -2.42
VCX3AQ9NNX9 MIR4667-201ENST00000578933 66 ntBASIC-0.07□□□□□ -2.42
VCX3AQ9NNX9 AC104408.1-201ENST00000605241 170 ntBASIC-0.07□□□□□ -2.42
VCX3AQ9NNX9 AL080274.1-201ENST00000605565 220 ntBASIC-0.07□□□□□ -2.42
VCX3AQ9NNX9 AC090517.2-201ENST00000614966 680 ntBASIC-0.07□□□□□ -2.42
VCX3AQ9NNX9 MIR8070-201ENST00000616510 88 ntBASIC-0.07□□□□□ -2.42
VCX3AQ9NNX9 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.07□□□□□ -2.42
VCX3AQ9NNX9 AC098679.4-201ENST00000624241 654 ntBASIC-0.07□□□□□ -2.42
VCX3AQ9NNX9 TPTEP1-208ENST00000636884 213 ntBASIC-0.07□□□□□ -2.42
VCX3AQ9NNX9 SNORD115-34-201ENST00000362441 82 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 SNORD115-12-201ENST00000362583 82 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 SNORD115-29-201ENST00000362834 82 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 SNORD115-9-201ENST00000362912 82 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 SNORD114-5-201ENST00000362928 70 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 SNORD115-21-201ENST00000362963 81 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 SNORD114-16-201ENST00000363044 70 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 SNORD115-14-201ENST00000363090 81 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 SNORD115-13-201ENST00000363358 82 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 SNORD115-41-201ENST00000363608 82 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 SNORD115-11-201ENST00000363616 82 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 SNORD115-5-201ENST00000363633 82 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 SNORD115-39-201ENST00000363694 82 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 SNORD115-4-201ENST00000363810 82 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 SNORD115-16-201ENST00000363887 82 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 SNORD115-6-201ENST00000363942 82 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 SNORD115-42-201ENST00000364273 82 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 SNORD115-15-201ENST00000364809 81 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 SNORD115-1-201ENST00000364961 82 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 SNORD115-26-201ENST00000365067 82 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 SNORD115-10-201ENST00000365073 81 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms