Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 RNU6-165P-201ENST00000517170 99 ntBASIC1.38□□□□□ -2.19
BRF2Q9HAW0 AC090142.3-201ENST00000519012 385 ntBASIC1.38□□□□□ -2.19
BRF2Q9HAW0 AC008507.4-201ENST00000585464 127 ntBASIC1.38□□□□□ -2.19
BRF2Q9HAW0 MIR26B-201ENST00000362251 77 ntBASIC1.37□□□□□ -2.19
BRF2Q9HAW0 Y_RNA.24-201ENST00000362508 103 ntBASIC1.37□□□□□ -2.19
BRF2Q9HAW0 MIR526A2-201ENST00000390198 65 ntBASIC1.37□□□□□ -2.19
BRF2Q9HAW0 SNORD127-201ENST00000458892 86 ntBASIC1.37□□□□□ -2.19
BRF2Q9HAW0 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.37□□□□□ -2.19
BRF2Q9HAW0 SNORD111.1-201ENST00000516421 86 ntBASIC1.37□□□□□ -2.19
BRF2Q9HAW0 RNU6-548P-201ENST00000517083 115 ntBASIC1.37□□□□□ -2.19
BRF2Q9HAW0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.37□□□□□ -2.19
BRF2Q9HAW0 uc_338.4-201ENST00000616635 176 ntBASIC1.37□□□□□ -2.19
BRF2Q9HAW0 Y_RNA.82-201ENST00000363000 102 ntBASIC1.36□□□□□ -2.19
BRF2Q9HAW0 Y_RNA.92-201ENST00000363043 102 ntBASIC1.36□□□□□ -2.19
BRF2Q9HAW0 Y_RNA.235-201ENST00000364412 102 ntBASIC1.36□□□□□ -2.19
BRF2Q9HAW0 Y_RNA.277-201ENST00000364754 102 ntBASIC1.36□□□□□ -2.19
BRF2Q9HAW0 Y_RNA.306-201ENST00000365015 102 ntBASIC1.36□□□□□ -2.19
BRF2Q9HAW0 Y_RNA.312-201ENST00000365089 102 ntBASIC1.36□□□□□ -2.19
BRF2Q9HAW0 Y_RNA.322-201ENST00000365151 102 ntBASIC1.36□□□□□ -2.19
BRF2Q9HAW0 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.36□□□□□ -2.19
BRF2Q9HAW0 SNRPGP13-201ENST00000442212 177 ntBASIC1.36□□□□□ -2.19
BRF2Q9HAW0 Y_RNA.650-201ENST00000459002 102 ntBASIC1.36□□□□□ -2.19
BRF2Q9HAW0 RNU6-1132P-201ENST00000459214 107 ntBASIC1.36□□□□□ -2.19
BRF2Q9HAW0 SNORA31.4-201ENST00000516049 129 ntBASIC1.36□□□□□ -2.19
BRF2Q9HAW0 SNORA18.7-201ENST00000516910 131 ntBASIC1.36□□□□□ -2.19
BRF2Q9HAW0 Y_RNA.777-201ENST00000516982 102 ntBASIC1.36□□□□□ -2.19
BRF2Q9HAW0 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.36□□□□□ -2.19
BRF2Q9HAW0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
BRF2Q9HAW0 AL160236.1-201ENST00000556317 195 ntBASIC1.36□□□□□ -2.19
BRF2Q9HAW0 Y_RNA.771-201ENST00000598668 102 ntBASIC1.36□□□□□ -2.19
BRF2Q9HAW0 U4.1-201ENST00000620349 87 ntBASIC1.36□□□□□ -2.19
BRF2Q9HAW0 Y_RNA.789-201ENST00000622480 102 ntBASIC1.36□□□□□ -2.19
BRF2Q9HAW0 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.36□□□□□ -2.19
BRF2Q9HAW0 RNA5SP327-201ENST00000362494 101 ntBASIC1.35□□□□□ -2.19
BRF2Q9HAW0 MIR568-201ENST00000385036 95 ntBASIC1.35□□□□□ -2.19
BRF2Q9HAW0 SNORD72-201ENST00000390994 80 ntBASIC1.35□□□□□ -2.19
BRF2Q9HAW0 Y_RNA.587-201ENST00000391210 103 ntBASIC1.35□□□□□ -2.19
BRF2Q9HAW0 RNU6-651P-201ENST00000411040 105 ntBASIC1.35□□□□□ -2.19
BRF2Q9HAW0 RNU7-149P-201ENST00000516739 59 ntBASIC1.35□□□□□ -2.19
BRF2Q9HAW0 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.35□□□□□ -2.19
BRF2Q9HAW0 AC019288.1-201ENST00000557918 224 ntBASIC1.35□□□□□ -2.19
BRF2Q9HAW0 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.35□□□□□ -2.19
BRF2Q9HAW0 MIR5688-201ENST00000580619 83 ntBASIC1.35□□□□□ -2.19
BRF2Q9HAW0 AC015726.2-201ENST00000620112 122 ntBASIC1.35□□□□□ -2.19
BRF2Q9HAW0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.35□□□□□ -2.19
BRF2Q9HAW0 SNORA25.8-201ENST00000364831 128 ntBASIC1.34□□□□□ -2.19
BRF2Q9HAW0 Y_RNA.518-201ENST00000384552 113 ntBASIC1.34□□□□□ -2.19
BRF2Q9HAW0 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.34□□□□□ -2.19
BRF2Q9HAW0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.34□□□□□ -2.19
BRF2Q9HAW0 AL645939.4-201ENST00000604495 135 ntBASIC1.34□□□□□ -2.19
BRF2Q9HAW0 BX284668.6-201ENST00000606899 438 ntBASIC1.34□□□□□ -2.19
BRF2Q9HAW0 Pinc.1-201ENST00000616452 154 ntBASIC1.34□□□□□ -2.19
BRF2Q9HAW0 AC068700.1-201ENST00000565862 3754 ntBASIC1.33□□□□□ -2.2
BRF2Q9HAW0 Y_RNA.122-201ENST00000363331 96 ntBASIC1.33□□□□□ -2.2
BRF2Q9HAW0 SNORD27-201ENST00000363981 72 ntBASIC1.33□□□□□ -2.2
BRF2Q9HAW0 RNU6-268P-201ENST00000364174 107 ntBASIC1.33□□□□□ -2.2
BRF2Q9HAW0 RNU6-702P-201ENST00000364982 107 ntBASIC1.33□□□□□ -2.2
BRF2Q9HAW0 Y_RNA.477-201ENST00000384352 108 ntBASIC1.33□□□□□ -2.2
BRF2Q9HAW0 MIR520C-201ENST00000385005 87 ntBASIC1.33□□□□□ -2.2
BRF2Q9HAW0 RNU6-1054P-201ENST00000411293 104 ntBASIC1.33□□□□□ -2.2
BRF2Q9HAW0 SNORD2.1-201ENST00000458762 69 ntBASIC1.33□□□□□ -2.2
BRF2Q9HAW0 Y_RNA.638-201ENST00000459374 113 ntBASIC1.33□□□□□ -2.2
BRF2Q9HAW0 RNA5SP61-201ENST00000516453 100 ntBASIC1.33□□□□□ -2.2
BRF2Q9HAW0 SNORA74.3-201ENST00000517108 154 ntBASIC1.33□□□□□ -2.2
BRF2Q9HAW0 AL162730.1-201ENST00000605734 292 ntBASIC1.33□□□□□ -2.2
BRF2Q9HAW0 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.33□□□□□ -2.2
BRF2Q9HAW0 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.33□□□□□ -2.2
BRF2Q9HAW0 MIR626-201ENST00000385032 94 ntBASIC1.32□□□□□ -2.2
BRF2Q9HAW0 SNORD123-201ENST00000459473 70 ntBASIC1.32□□□□□ -2.2
BRF2Q9HAW0 MIR4662B-201ENST00000579498 81 ntBASIC1.32□□□□□ -2.2
BRF2Q9HAW0 AC062037.2-201ENST00000610137 73 ntBASIC1.32□□□□□ -2.2
BRF2Q9HAW0 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
BRF2Q9HAW0 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
BRF2Q9HAW0 Y_RNA.229-201ENST00000364347 113 ntBASIC1.31□□□□□ -2.2
BRF2Q9HAW0 Y_RNA.416-201ENST00000384014 113 ntBASIC1.31□□□□□ -2.2
BRF2Q9HAW0 Y_RNA.572-201ENST00000384757 98 ntBASIC1.31□□□□□ -2.2
BRF2Q9HAW0 MIR222-201ENST00000384992 110 ntBASIC1.31□□□□□ -2.2
BRF2Q9HAW0 MIR150-201ENST00000385048 84 ntBASIC1.31□□□□□ -2.2
BRF2Q9HAW0 MIR758-201ENST00000390227 88 ntBASIC1.31□□□□□ -2.2
BRF2Q9HAW0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.31□□□□□ -2.2
BRF2Q9HAW0 SNORA31.2-201ENST00000516019 134 ntBASIC1.31□□□□□ -2.2
BRF2Q9HAW0 AC100767.1-201ENST00000528178 123 ntBASIC1.31□□□□□ -2.2
BRF2Q9HAW0 AL021707.8-201ENST00000609428 183 ntBASIC1.31□□□□□ -2.2
BRF2Q9HAW0 MIR7974-201ENST00000615835 79 ntBASIC1.31□□□□□ -2.2
BRF2Q9HAW0 AL365265.1-201ENST00000621045 234 ntBASIC1.31□□□□□ -2.2
BRF2Q9HAW0 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
BRF2Q9HAW0 Y_RNA.65-201ENST00000362846 100 ntBASIC1.3□□□□□ -2.2
BRF2Q9HAW0 Y_RNA.262-201ENST00000364641 102 ntBASIC1.3□□□□□ -2.2
BRF2Q9HAW0 Y_RNA.304-201ENST00000365011 112 ntBASIC1.3□□□□□ -2.2
BRF2Q9HAW0 Y_RNA.350-201ENST00000365409 98 ntBASIC1.3□□□□□ -2.2
BRF2Q9HAW0 RNU6-1067P-201ENST00000384752 107 ntBASIC1.3□□□□□ -2.2
BRF2Q9HAW0 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.3□□□□□ -2.2
BRF2Q9HAW0 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.3□□□□□ -2.2
BRF2Q9HAW0 AC245047.7-201ENST00000440265 293 ntBASIC1.3□□□□□ -2.2
BRF2Q9HAW0 AC245047.8-201ENST00000456455 284 ntBASIC1.3□□□□□ -2.2
BRF2Q9HAW0 COX6CP14-201ENST00000469580 174 ntBASIC1.3□□□□□ -2.2
BRF2Q9HAW0 AC048334.1-201ENST00000477975 159 ntBASIC1.3□□□□□ -2.2
BRF2Q9HAW0 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.3□□□□□ -2.2
BRF2Q9HAW0 Y_RNA.668-201ENST00000516233 93 ntBASIC1.3□□□□□ -2.2
BRF2Q9HAW0 RNU7-43P-201ENST00000516554 64 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 212.6 ms