Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 snoU13.27-201ENST00000459278 104 ntBASIC1.78□□□□□ -2.12
HIPK3Q9H422 HMGN1P7-201ENST00000491722 313 ntBASIC1.78□□□□□ -2.12
HIPK3Q9H422 RNU6-138P-201ENST00000515952 107 ntBASIC1.78□□□□□ -2.12
HIPK3Q9H422 AC022254.1-201ENST00000567857 235 ntBASIC1.78□□□□□ -2.12
HIPK3Q9H422 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.78□□□□□ -2.12
HIPK3Q9H422 MIR2681-201ENST00000581814 105 ntBASIC1.78□□□□□ -2.12
HIPK3Q9H422 MIR4713-201ENST00000582691 75 ntBASIC1.78□□□□□ -2.12
HIPK3Q9H422 AL591926.4-201ENST00000616895 298 ntBASIC1.78□□□□□ -2.12
HIPK3Q9H422 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
HIPK3Q9H422 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
HIPK3Q9H422 RNU6-1209P-201ENST00000363655 107 ntBASIC1.77□□□□□ -2.13
HIPK3Q9H422 RNU6-1031P-201ENST00000384773 107 ntBASIC1.77□□□□□ -2.13
HIPK3Q9H422 SNORA12.1-201ENST00000390873 148 ntBASIC1.77□□□□□ -2.13
HIPK3Q9H422 RNU6-360P-201ENST00000390944 104 ntBASIC1.77□□□□□ -2.13
HIPK3Q9H422 RNA5SP482-201ENST00000391269 118 ntBASIC1.77□□□□□ -2.13
HIPK3Q9H422 COX6CP10-201ENST00000416832 224 ntBASIC1.77□□□□□ -2.13
HIPK3Q9H422 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.77□□□□□ -2.13
HIPK3Q9H422 Z98949.2-201ENST00000440996 144 ntBASIC1.77□□□□□ -2.13
HIPK3Q9H422 OR9P1P-201ENST00000496431 281 ntBASIC1.77□□□□□ -2.13
HIPK3Q9H422 SNORA28-201ENST00000606769 126 ntBASIC1.77□□□□□ -2.13
HIPK3Q9H422 MIR6504-201ENST00000613520 61 ntBASIC1.77□□□□□ -2.13
HIPK3Q9H422 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.76□□□□□ -2.13
HIPK3Q9H422 SNORA7.1-201ENST00000363750 139 ntBASIC1.76□□□□□ -2.13
HIPK3Q9H422 RNU6-923P-201ENST00000364753 107 ntBASIC1.76□□□□□ -2.13
HIPK3Q9H422 Y_RNA.297-201ENST00000364950 91 ntBASIC1.76□□□□□ -2.13
HIPK3Q9H422 RNU4-17P-201ENST00000365598 141 ntBASIC1.76□□□□□ -2.13
HIPK3Q9H422 RNU6-493P-201ENST00000391321 108 ntBASIC1.76□□□□□ -2.13
HIPK3Q9H422 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.76□□□□□ -2.13
HIPK3Q9H422 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.76□□□□□ -2.13
HIPK3Q9H422 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.76□□□□□ -2.13
HIPK3Q9H422 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
HIPK3Q9H422 RPL23AP91-201ENST00000569211 455 ntBASIC1.76□□□□□ -2.13
HIPK3Q9H422 MIR4709-201ENST00000577272 72 ntBASIC1.76□□□□□ -2.13
HIPK3Q9H422 JPX_2.1-201ENST00000614161 69 ntBASIC1.76□□□□□ -2.13
HIPK3Q9H422 MIR126-201ENST00000362291 85 ntBASIC1.75□□□□□ -2.13
HIPK3Q9H422 snoU2_19.4-201ENST00000364329 80 ntBASIC1.75□□□□□ -2.13
HIPK3Q9H422 RNA5SP496-201ENST00000391240 109 ntBASIC1.75□□□□□ -2.13
HIPK3Q9H422 RNU6-381P-201ENST00000391259 108 ntBASIC1.75□□□□□ -2.13
HIPK3Q9H422 AL034345.1-201ENST00000407768 123 ntBASIC1.75□□□□□ -2.13
HIPK3Q9H422 RN7SKP101-201ENST00000411376 320 ntBASIC1.75□□□□□ -2.13
HIPK3Q9H422 SNRPGP10-201ENST00000432323 225 ntBASIC1.75□□□□□ -2.13
HIPK3Q9H422 RNU7-34P-201ENST00000459394 64 ntBASIC1.75□□□□□ -2.13
HIPK3Q9H422 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.75□□□□□ -2.13
HIPK3Q9H422 RNU1-92P-201ENST00000517017 135 ntBASIC1.75□□□□□ -2.13
HIPK3Q9H422 MIR4308-201ENST00000580634 81 ntBASIC1.75□□□□□ -2.13
HIPK3Q9H422 Z83818.1-201ENST00000603584 150 ntBASIC1.75□□□□□ -2.13
HIPK3Q9H422 AL021707.8-201ENST00000609428 183 ntBASIC1.75□□□□□ -2.13
HIPK3Q9H422 SNORD68-201ENST00000363214 84 ntBASIC1.74□□□□□ -2.13
HIPK3Q9H422 Y_RNA.229-201ENST00000364347 113 ntBASIC1.74□□□□□ -2.13
HIPK3Q9H422 Y_RNA.466-201ENST00000384294 113 ntBASIC1.74□□□□□ -2.13
HIPK3Q9H422 MIR522-201ENST00000385071 87 ntBASIC1.74□□□□□ -2.13
HIPK3Q9H422 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.74□□□□□ -2.13
HIPK3Q9H422 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.74□□□□□ -2.13
HIPK3Q9H422 SNORD11-201ENST00000459124 84 ntBASIC1.74□□□□□ -2.13
HIPK3Q9H422 AC099513.1-201ENST00000490423 301 ntBASIC1.74□□□□□ -2.13
HIPK3Q9H422 MIR4762-201ENST00000585261 75 ntBASIC1.74□□□□□ -2.13
HIPK3Q9H422 AC021506.2-201ENST00000612354 169 ntBASIC1.74□□□□□ -2.13
HIPK3Q9H422 U8.5-201ENST00000364528 136 ntBASIC1.73□□□□□ -2.13
HIPK3Q9H422 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
HIPK3Q9H422 RNU6-918P-201ENST00000391219 106 ntBASIC1.73□□□□□ -2.13
HIPK3Q9H422 MLLT10P1-201ENST00000418346 262 ntBASIC1.73□□□□□ -2.13
HIPK3Q9H422 FTH1P12-201ENST00000432137 551 ntBASIC1.73□□□□□ -2.13
HIPK3Q9H422 AL138752.1-201ENST00000452964 351 ntBASIC1.73□□□□□ -2.13
HIPK3Q9H422 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.73□□□□□ -2.13
HIPK3Q9H422 Y_RNA.644-201ENST00000459006 113 ntBASIC1.73□□□□□ -2.13
HIPK3Q9H422 NDUFA4P2-201ENST00000489989 244 ntBASIC1.73□□□□□ -2.13
HIPK3Q9H422 SCARNA8-201ENST00000515924 131 ntBASIC1.73□□□□□ -2.13
HIPK3Q9H422 Y_RNA.674-201ENST00000516362 113 ntBASIC1.73□□□□□ -2.13
HIPK3Q9H422 Y_RNA.700-201ENST00000516806 100 ntBASIC1.73□□□□□ -2.13
HIPK3Q9H422 RNU6-453P-201ENST00000516819 85 ntBASIC1.73□□□□□ -2.13
HIPK3Q9H422 MIR4421-201ENST00000578133 69 ntBASIC1.73□□□□□ -2.13
HIPK3Q9H422 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
HIPK3Q9H422 ZNF209P-201ENST00000593450 2304 ntBASIC1.73□□□□□ -2.13
HIPK3Q9H422 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.72□□□□□ -2.13
HIPK3Q9H422 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
HIPK3Q9H422 MIRLET7C-201ENST00000362160 84 ntBASIC1.72□□□□□ -2.13
HIPK3Q9H422 SNORD48-201ENST00000364953 64 ntBASIC1.72□□□□□ -2.13
HIPK3Q9H422 RNU6-47P-201ENST00000383866 107 ntBASIC1.72□□□□□ -2.13
HIPK3Q9H422 RNU6-439P-201ENST00000384188 106 ntBASIC1.72□□□□□ -2.13
HIPK3Q9H422 Y_RNA.785-201ENST00000384290 109 ntBASIC1.72□□□□□ -2.13
HIPK3Q9H422 MIR517C-201ENST00000385103 95 ntBASIC1.72□□□□□ -2.13
HIPK3Q9H422 MIR616-201ENST00000385293 97 ntBASIC1.72□□□□□ -2.13
HIPK3Q9H422 CALM2P4-201ENST00000430810 426 ntBASIC1.72□□□□□ -2.13
HIPK3Q9H422 AC245047.8-201ENST00000456455 284 ntBASIC1.72□□□□□ -2.13
HIPK3Q9H422 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.72□□□□□ -2.13
HIPK3Q9H422 RN7SKP164-201ENST00000516138 266 ntBASIC1.72□□□□□ -2.13
HIPK3Q9H422 SNORA4-201ENST00000584302 138 ntBASIC1.72□□□□□ -2.13
HIPK3Q9H422 AC103810.8-201ENST00000607347 118 ntBASIC1.72□□□□□ -2.13
HIPK3Q9H422 AL157834.3-201ENST00000615543 103 ntBASIC1.72□□□□□ -2.13
HIPK3Q9H422 Y_RNA.7-201ENST00000362352 102 ntBASIC1.71□□□□□ -2.14
HIPK3Q9H422 RNU6-1020P-201ENST00000363684 107 ntBASIC1.71□□□□□ -2.14
HIPK3Q9H422 MT-TT-201ENST00000387460 66 ntBASIC1.71□□□□□ -2.14
HIPK3Q9H422 RNU6-131P-201ENST00000391144 107 ntBASIC1.71□□□□□ -2.14
HIPK3Q9H422 MIR1323-201ENST00000408090 73 ntBASIC1.71□□□□□ -2.14
HIPK3Q9H422 Y_RNA.793-201ENST00000411222 111 ntBASIC1.71□□□□□ -2.14
HIPK3Q9H422 MTND5P15-201ENST00000434246 349 ntBASIC1.71□□□□□ -2.14
HIPK3Q9H422 RNA5SP168-201ENST00000516642 112 ntBASIC1.71□□□□□ -2.14
HIPK3Q9H422 Y_RNA.714-201ENST00000517065 90 ntBASIC1.71□□□□□ -2.14
HIPK3Q9H422 SNORA31.24-201ENST00000517232 57 ntBASIC1.71□□□□□ -2.14
HIPK3Q9H422 SNORA81.3-201ENST00000517283 198 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 185.8 ms