Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 RNU6-290P-201ENST00000365212 101 ntBASIC1.08□□□□□ -2.24
SNX25Q9H3E2 SNORA33.2-201ENST00000365413 134 ntBASIC1.08□□□□□ -2.24
SNX25Q9H3E2 MTCO2P33-201ENST00000402100 465 ntBASIC1.08□□□□□ -2.24
SNX25Q9H3E2 OR2A41P-201ENST00000473586 105 ntBASIC1.08□□□□□ -2.24
SNX25Q9H3E2 RNY3P15-201ENST00000516297 97 ntBASIC1.08□□□□□ -2.24
SNX25Q9H3E2 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
SNX25Q9H3E2 Y_RNA.64-201ENST00000362845 102 ntBASIC1.07□□□□□ -2.24
SNX25Q9H3E2 SNORD14E-201ENST00000364009 85 ntBASIC1.07□□□□□ -2.24
SNX25Q9H3E2 SNORA25.9-201ENST00000365087 128 ntBASIC1.07□□□□□ -2.24
SNX25Q9H3E2 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.07□□□□□ -2.24
SNX25Q9H3E2 SNORD11-201ENST00000459124 84 ntBASIC1.07□□□□□ -2.24
SNX25Q9H3E2 SNORA18.7-201ENST00000516910 131 ntBASIC1.07□□□□□ -2.24
SNX25Q9H3E2 AP003716.2-201ENST00000528260 108 ntBASIC1.07□□□□□ -2.24
SNX25Q9H3E2 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.07□□□□□ -2.24
SNX25Q9H3E2 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.07□□□□□ -2.24
SNX25Q9H3E2 AC087685.1-201ENST00000587507 141 ntBASIC1.07□□□□□ -2.24
SNX25Q9H3E2 RNU6-899P-201ENST00000363947 107 ntBASIC1.06□□□□□ -2.24
SNX25Q9H3E2 RNU4-38P-201ENST00000364472 129 ntBASIC1.06□□□□□ -2.24
SNX25Q9H3E2 RNU6-1227P-201ENST00000383981 107 ntBASIC1.06□□□□□ -2.24
SNX25Q9H3E2 MIR19B1-201ENST00000384829 87 ntBASIC1.06□□□□□ -2.24
SNX25Q9H3E2 MIR1276-201ENST00000408707 83 ntBASIC1.06□□□□□ -2.24
SNX25Q9H3E2 RNU6-985P-201ENST00000410182 104 ntBASIC1.06□□□□□ -2.24
SNX25Q9H3E2 AC005534.2-201ENST00000431047 433 ntBASIC1.06□□□□□ -2.24
SNX25Q9H3E2 AC002429.1-201ENST00000437672 148 ntBASIC1.06□□□□□ -2.24
SNX25Q9H3E2 RPL23AP91-201ENST00000569211 455 ntBASIC1.06□□□□□ -2.24
SNX25Q9H3E2 MIR2681-201ENST00000581814 105 ntBASIC1.06□□□□□ -2.24
SNX25Q9H3E2 AC008507.4-201ENST00000585464 127 ntBASIC1.06□□□□□ -2.24
SNX25Q9H3E2 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.06□□□□□ -2.24
SNX25Q9H3E2 AC007742.2-201ENST00000618226 398 ntBASIC1.06□□□□□ -2.24
SNX25Q9H3E2 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SNX25Q9H3E2 RNU6-1187P-201ENST00000364771 110 ntBASIC1.05□□□□□ -2.24
SNX25Q9H3E2 RNU6-326P-201ENST00000365480 107 ntBASIC1.05□□□□□ -2.24
SNX25Q9H3E2 SNORD12-201ENST00000391002 90 ntBASIC1.05□□□□□ -2.24
SNX25Q9H3E2 AL603910.2-201ENST00000407268 136 ntBASIC1.05□□□□□ -2.24
SNX25Q9H3E2 AC245047.8-201ENST00000456455 284 ntBASIC1.05□□□□□ -2.24
SNX25Q9H3E2 SNORD123-201ENST00000459473 70 ntBASIC1.05□□□□□ -2.24
SNX25Q9H3E2 RNU7-41P-201ENST00000515917 61 ntBASIC1.05□□□□□ -2.24
SNX25Q9H3E2 RNU2-31P-201ENST00000516954 155 ntBASIC1.05□□□□□ -2.24
SNX25Q9H3E2 AP003733.2-201ENST00000529409 171 ntBASIC1.05□□□□□ -2.24
SNX25Q9H3E2 AC136443.5-201ENST00000603741 370 ntBASIC1.05□□□□□ -2.24
SNX25Q9H3E2 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
SNX25Q9H3E2 MIR96-201ENST00000362288 78 ntBASIC1.04□□□□□ -2.24
SNX25Q9H3E2 RNU6-268P-201ENST00000364174 107 ntBASIC1.04□□□□□ -2.24
SNX25Q9H3E2 MIR520C-201ENST00000385005 87 ntBASIC1.04□□□□□ -2.24
SNX25Q9H3E2 SNORD72-201ENST00000390994 80 ntBASIC1.04□□□□□ -2.24
SNX25Q9H3E2 MIR4764-201ENST00000580680 88 ntBASIC1.04□□□□□ -2.24
SNX25Q9H3E2 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
SNX25Q9H3E2 MIR6504-201ENST00000613520 61 ntBASIC1.04□□□□□ -2.24
SNX25Q9H3E2 AC013791.1-201ENST00000616619 62 ntBASIC1.04□□□□□ -2.24
SNX25Q9H3E2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.03□□□□□ -2.24
SNX25Q9H3E2 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
SNX25Q9H3E2 Y_RNA.11-201ENST00000362375 109 ntBASIC1.03□□□□□ -2.24
SNX25Q9H3E2 Y_RNA.16-201ENST00000362421 102 ntBASIC1.03□□□□□ -2.24
SNX25Q9H3E2 RNU6-1272P-201ENST00000362776 107 ntBASIC1.03□□□□□ -2.24
SNX25Q9H3E2 Y_RNA.152-201ENST00000363578 100 ntBASIC1.03□□□□□ -2.24
SNX25Q9H3E2 Y_RNA.238-201ENST00000364441 102 ntBASIC1.03□□□□□ -2.24
SNX25Q9H3E2 RNU6-144P-201ENST00000383951 107 ntBASIC1.03□□□□□ -2.24
SNX25Q9H3E2 SNORA80D-201ENST00000384488 135 ntBASIC1.03□□□□□ -2.24
SNX25Q9H3E2 MIR15B-201ENST00000385045 98 ntBASIC1.03□□□□□ -2.24
SNX25Q9H3E2 MIR802-201ENST00000390235 94 ntBASIC1.03□□□□□ -2.24
SNX25Q9H3E2 SNORA75.2-201ENST00000391138 150 ntBASIC1.03□□□□□ -2.24
SNX25Q9H3E2 SNORA75.3-201ENST00000391231 150 ntBASIC1.03□□□□□ -2.24
SNX25Q9H3E2 RNU7-21P-201ENST00000459430 62 ntBASIC1.03□□□□□ -2.24
SNX25Q9H3E2 AC091959.1-201ENST00000495857 238 ntBASIC1.03□□□□□ -2.24
SNX25Q9H3E2 RNU6-1143P-201ENST00000516125 104 ntBASIC1.03□□□□□ -2.24
SNX25Q9H3E2 RNU6-830P-201ENST00000516353 107 ntBASIC1.03□□□□□ -2.24
SNX25Q9H3E2 RNU7-43P-201ENST00000516554 64 ntBASIC1.03□□□□□ -2.24
SNX25Q9H3E2 AL512605.2-201ENST00000592972 256 ntBASIC1.03□□□□□ -2.24
SNX25Q9H3E2 AC044792.1-201ENST00000593294 196 ntBASIC1.03□□□□□ -2.24
SNX25Q9H3E2 Y_RNA.84-201ENST00000363011 104 ntBASIC1.02□□□□□ -2.25
SNX25Q9H3E2 RNU6-1205P-201ENST00000363625 106 ntBASIC1.02□□□□□ -2.25
SNX25Q9H3E2 Y_RNA.217-201ENST00000364214 105 ntBASIC1.02□□□□□ -2.25
SNX25Q9H3E2 RNU6-442P-201ENST00000383968 104 ntBASIC1.02□□□□□ -2.25
SNX25Q9H3E2 SNORA53-201ENST00000391141 249 ntBASIC1.02□□□□□ -2.25
SNX25Q9H3E2 AC063976.4-201ENST00000421971 163 ntBASIC1.02□□□□□ -2.25
SNX25Q9H3E2 AL731563.1-201ENST00000442202 214 ntBASIC1.02□□□□□ -2.25
SNX25Q9H3E2 MTND5P22-201ENST00000458380 195 ntBASIC1.02□□□□□ -2.25
SNX25Q9H3E2 Y_RNA.641-201ENST00000459414 105 ntBASIC1.02□□□□□ -2.25
SNX25Q9H3E2 SNORA27.4-201ENST00000516650 95 ntBASIC1.02□□□□□ -2.25
SNX25Q9H3E2 RNU6-113P-201ENST00000516653 101 ntBASIC1.02□□□□□ -2.25
SNX25Q9H3E2 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.02□□□□□ -2.25
SNX25Q9H3E2 MIR548AR-201ENST00000582191 57 ntBASIC1.02□□□□□ -2.25
SNX25Q9H3E2 SNORA25.1-201ENST00000362326 128 ntBASIC1.01□□□□□ -2.25
SNX25Q9H3E2 RNA5SP264-201ENST00000363115 107 ntBASIC1.01□□□□□ -2.25
SNX25Q9H3E2 SNORA25.3-201ENST00000363205 127 ntBASIC1.01□□□□□ -2.25
SNX25Q9H3E2 RNU6-639P-201ENST00000384074 107 ntBASIC1.01□□□□□ -2.25
SNX25Q9H3E2 RNU6-514P-201ENST00000384208 107 ntBASIC1.01□□□□□ -2.25
SNX25Q9H3E2 RNU6-662P-201ENST00000384253 104 ntBASIC1.01□□□□□ -2.25
SNX25Q9H3E2 SNORD38C-201ENST00000384381 69 ntBASIC1.01□□□□□ -2.25
SNX25Q9H3E2 MIR499A-201ENST00000384903 122 ntBASIC1.01□□□□□ -2.25
SNX25Q9H3E2 SNORD28B-201ENST00000390993 75 ntBASIC1.01□□□□□ -2.25
SNX25Q9H3E2 RNU6-383P-201ENST00000410864 94 ntBASIC1.01□□□□□ -2.25
SNX25Q9H3E2 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.01□□□□□ -2.25
SNX25Q9H3E2 MIR5692C2-201ENST00000577959 77 ntBASIC1.01□□□□□ -2.25
SNX25Q9H3E2 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.01□□□□□ -2.25
SNX25Q9H3E2 AL021707.8-201ENST00000609428 183 ntBASIC1.01□□□□□ -2.25
SNX25Q9H3E2 AC006441.5-201ENST00000612680 209 ntBASIC1.01□□□□□ -2.25
SNX25Q9H3E2 AC022140.2-201ENST00000623500 188 ntBASIC1.01□□□□□ -2.25
SNX25Q9H3E2 AC008163.1-202ENST00000636004 2889 ntBASIC1.01□□□□□ -2.25
SNX25Q9H3E2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 190 ms