Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 MIR6734-201ENST00000621166 68 ntBASIC1.02□□□□□ -2.25
CHMP4AQ9BY43 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.01□□□□□ -2.25
CHMP4AQ9BY43 RNU6-442P-201ENST00000383968 104 ntBASIC1.01□□□□□ -2.25
CHMP4AQ9BY43 Y_RNA.508-201ENST00000384502 114 ntBASIC1.01□□□□□ -2.25
CHMP4AQ9BY43 RNU6-130P-201ENST00000411112 103 ntBASIC1.01□□□□□ -2.25
CHMP4AQ9BY43 RNU7-141P-201ENST00000459304 62 ntBASIC1.01□□□□□ -2.25
CHMP4AQ9BY43 AC098869.1-201ENST00000481627 292 ntBASIC1.01□□□□□ -2.25
CHMP4AQ9BY43 COX6CP6-201ENST00000490840 228 ntBASIC1.01□□□□□ -2.25
CHMP4AQ9BY43 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.01□□□□□ -2.25
CHMP4AQ9BY43 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.01□□□□□ -2.25
CHMP4AQ9BY43 MIR151B-201ENST00000584249 96 ntBASIC1.01□□□□□ -2.25
CHMP4AQ9BY43 SNORD113-5-201ENST00000607261 78 ntBASIC1.01□□□□□ -2.25
CHMP4AQ9BY43 MIR369-201ENST00000362155 70 ntBASIC1□□□□□ -2.25
CHMP4AQ9BY43 Y_RNA.796-201ENST00000364268 102 ntBASIC1□□□□□ -2.25
CHMP4AQ9BY43 Y_RNA.799-201ENST00000364992 102 ntBASIC1□□□□□ -2.25
CHMP4AQ9BY43 SNORA36B-201ENST00000410438 131 ntBASIC1□□□□□ -2.25
CHMP4AQ9BY43 RNU6-437P-201ENST00000459408 95 ntBASIC1□□□□□ -2.25
CHMP4AQ9BY43 snoU13.18-201ENST00000459483 104 ntBASIC1□□□□□ -2.25
CHMP4AQ9BY43 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1□□□□□ -2.25
CHMP4AQ9BY43 RNU6-397P-201ENST00000516226 104 ntBASIC1□□□□□ -2.25
CHMP4AQ9BY43 RNU6-1046P-201ENST00000516538 107 ntBASIC1□□□□□ -2.25
CHMP4AQ9BY43 RPL23AP91-201ENST00000569211 455 ntBASIC1□□□□□ -2.25
CHMP4AQ9BY43 MIR4698-201ENST00000577795 80 ntBASIC1□□□□□ -2.25
CHMP4AQ9BY43 MIR2681-201ENST00000581814 105 ntBASIC1□□□□□ -2.25
CHMP4AQ9BY43 uc_338.22-201ENST00000622722 187 ntBASIC1□□□□□ -2.25
CHMP4AQ9BY43 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1□□□□□ -2.25
CHMP4AQ9BY43 AC134026.1-201ENST00000623249 2239 ntBASIC1□□□□□ -2.25
CHMP4AQ9BY43 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CHMP4AQ9BY43 RNU6-308P-201ENST00000390957 107 ntBASIC0.99□□□□□ -2.25
CHMP4AQ9BY43 MIR1302-11-201ENST00000408051 138 ntBASIC0.99□□□□□ -2.25
CHMP4AQ9BY43 MIR1302-9-201ENST00000408365 138 ntBASIC0.99□□□□□ -2.25
CHMP4AQ9BY43 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.99□□□□□ -2.25
CHMP4AQ9BY43 MIR1302-10-201ENST00000408734 138 ntBASIC0.99□□□□□ -2.25
CHMP4AQ9BY43 RNU2-14P-201ENST00000411053 191 ntBASIC0.99□□□□□ -2.25
CHMP4AQ9BY43 RPS29P1-201ENST00000465274 159 ntBASIC0.99□□□□□ -2.25
CHMP4AQ9BY43 NDUFA4P2-201ENST00000489989 244 ntBASIC0.99□□□□□ -2.25
CHMP4AQ9BY43 RNU6-475P-201ENST00000516073 104 ntBASIC0.99□□□□□ -2.25
CHMP4AQ9BY43 RN7SKP164-201ENST00000516138 266 ntBASIC0.99□□□□□ -2.25
CHMP4AQ9BY43 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CHMP4AQ9BY43 MIR1302-2-201ENST00000607096 138 ntBASIC0.99□□□□□ -2.25
CHMP4AQ9BY43 AC008133.2-201ENST00000624540 351 ntBASIC0.99□□□□□ -2.25
CHMP4AQ9BY43 MIR4251-201ENST00000635819 61 ntBASIC0.99□□□□□ -2.25
CHMP4AQ9BY43 AL442644.1-201ENST00000454390 3105 ntBASIC0.99□□□□□ -2.25
CHMP4AQ9BY43 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.98□□□□□ -2.25
CHMP4AQ9BY43 Y_RNA.112-201ENST00000363250 102 ntBASIC0.98□□□□□ -2.25
CHMP4AQ9BY43 Y_RNA.355-201ENST00000365462 98 ntBASIC0.98□□□□□ -2.25
CHMP4AQ9BY43 Y_RNA.419-201ENST00000384041 102 ntBASIC0.98□□□□□ -2.25
CHMP4AQ9BY43 SNORD28B-201ENST00000390993 75 ntBASIC0.98□□□□□ -2.25
CHMP4AQ9BY43 RNU6-1248P-201ENST00000391096 64 ntBASIC0.98□□□□□ -2.25
CHMP4AQ9BY43 MIR548J-201ENST00000408833 112 ntBASIC0.98□□□□□ -2.25
CHMP4AQ9BY43 RNU6-994P-201ENST00000410507 111 ntBASIC0.98□□□□□ -2.25
CHMP4AQ9BY43 Y_RNA.602-201ENST00000410535 92 ntBASIC0.98□□□□□ -2.25
CHMP4AQ9BY43 RNU6-1223P-201ENST00000517124 104 ntBASIC0.98□□□□□ -2.25
CHMP4AQ9BY43 MIR548AR-201ENST00000582191 57 ntBASIC0.98□□□□□ -2.25
CHMP4AQ9BY43 AC013244.2-201ENST00000603396 103 ntBASIC0.98□□□□□ -2.25
CHMP4AQ9BY43 AC124312.5-201ENST00000604451 268 ntBASIC0.98□□□□□ -2.25
CHMP4AQ9BY43 SNORD113-8-201ENST00000363497 74 ntBASIC0.97□□□□□ -2.25
CHMP4AQ9BY43 SNORA72.4-201ENST00000384174 132 ntBASIC0.97□□□□□ -2.25
CHMP4AQ9BY43 MIR570-201ENST00000384917 97 ntBASIC0.97□□□□□ -2.25
CHMP4AQ9BY43 MTCO2P33-201ENST00000402100 465 ntBASIC0.97□□□□□ -2.25
CHMP4AQ9BY43 RNU6-733P-201ENST00000410759 104 ntBASIC0.97□□□□□ -2.25
CHMP4AQ9BY43 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.97□□□□□ -2.25
CHMP4AQ9BY43 AL035398.1-201ENST00000430869 322 ntBASIC0.97□□□□□ -2.25
CHMP4AQ9BY43 RNA5SP121-201ENST00000516537 101 ntBASIC0.97□□□□□ -2.25
CHMP4AQ9BY43 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.97□□□□□ -2.25
CHMP4AQ9BY43 Pinc.1-201ENST00000616452 154 ntBASIC0.97□□□□□ -2.25
CHMP4AQ9BY43 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
CHMP4AQ9BY43 RNU6-801P-201ENST00000364087 105 ntBASIC0.96□□□□□ -2.26
CHMP4AQ9BY43 MIR605-201ENST00000385078 83 ntBASIC0.96□□□□□ -2.26
CHMP4AQ9BY43 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
CHMP4AQ9BY43 RPS26P5-201ENST00000418544 335 ntBASIC0.96□□□□□ -2.26
CHMP4AQ9BY43 MTND4P19-201ENST00000446659 478 ntBASIC0.96□□□□□ -2.26
CHMP4AQ9BY43 MIR2115-201ENST00000516657 100 ntBASIC0.96□□□□□ -2.26
CHMP4AQ9BY43 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.96□□□□□ -2.26
CHMP4AQ9BY43 SNORA4-201ENST00000584302 138 ntBASIC0.96□□□□□ -2.26
CHMP4AQ9BY43 AC005357.1-201ENST00000588399 301 ntBASIC0.96□□□□□ -2.26
CHMP4AQ9BY43 MIR376A1-201ENST00000616574 68 ntBASIC0.96□□□□□ -2.26
CHMP4AQ9BY43 MIR6835-201ENST00000621552 64 ntBASIC0.96□□□□□ -2.26
CHMP4AQ9BY43 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.96□□□□□ -2.26
CHMP4AQ9BY43 AC023934.1-201ENST00000574529 2389 ntBASIC0.96□□□□□ -2.26
CHMP4AQ9BY43 RNU6-268P-201ENST00000364174 107 ntBASIC0.95□□□□□ -2.26
CHMP4AQ9BY43 SNORD113.3-201ENST00000364630 78 ntBASIC0.95□□□□□ -2.26
CHMP4AQ9BY43 SNORA26.5-201ENST00000391215 123 ntBASIC0.95□□□□□ -2.26
CHMP4AQ9BY43 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.95□□□□□ -2.26
CHMP4AQ9BY43 AC022028.1-201ENST00000412054 408 ntBASIC0.95□□□□□ -2.26
CHMP4AQ9BY43 RNU6-830P-201ENST00000516353 107 ntBASIC0.95□□□□□ -2.26
CHMP4AQ9BY43 AC008507.4-201ENST00000585464 127 ntBASIC0.95□□□□□ -2.26
CHMP4AQ9BY43 Z83818.1-201ENST00000603584 150 ntBASIC0.95□□□□□ -2.26
CHMP4AQ9BY43 RNU6-94P-201ENST00000607728 107 ntBASIC0.95□□□□□ -2.26
CHMP4AQ9BY43 AC015726.2-201ENST00000620112 122 ntBASIC0.95□□□□□ -2.26
CHMP4AQ9BY43 Y_RNA.118-201ENST00000363300 101 ntBASIC0.94□□□□□ -2.26
CHMP4AQ9BY43 Y_RNA.445-201ENST00000384168 102 ntBASIC0.94□□□□□ -2.26
CHMP4AQ9BY43 SNORD72-201ENST00000390994 80 ntBASIC0.94□□□□□ -2.26
CHMP4AQ9BY43 AC005534.2-201ENST00000431047 433 ntBASIC0.94□□□□□ -2.26
CHMP4AQ9BY43 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.94□□□□□ -2.26
CHMP4AQ9BY43 AC018659.1-201ENST00000551083 169 ntBASIC0.94□□□□□ -2.26
CHMP4AQ9BY43 MIR4300-201ENST00000581016 96 ntBASIC0.94□□□□□ -2.26
CHMP4AQ9BY43 AC012433.1-201ENST00000588916 398 ntBASIC0.94□□□□□ -2.26
CHMP4AQ9BY43 AL590095.2-201ENST00000604136 117 ntBASIC0.94□□□□□ -2.26
CHMP4AQ9BY43 AC090971.5-201ENST00000621102 293 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms