Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 PSMC1P5-201ENST00000512850 177 ntBASIC0.76□□□□□ -2.29
NPAS2Q99743 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.76□□□□□ -2.29
NPAS2Q99743 MIR3192-201ENST00000584920 77 ntBASIC0.76□□□□□ -2.29
NPAS2Q99743 RAC1P9-201ENST00000604990 392 ntBASIC0.76□□□□□ -2.29
NPAS2Q99743 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.76□□□□□ -2.29
NPAS2Q99743 Y_RNA.456-201ENST00000384232 111 ntBASIC0.75□□□□□ -2.29
NPAS2Q99743 MIR452-201ENST00000385020 85 ntBASIC0.75□□□□□ -2.29
NPAS2Q99743 SNORA75.2-201ENST00000391138 150 ntBASIC0.75□□□□□ -2.29
NPAS2Q99743 RNU6-131P-201ENST00000391144 107 ntBASIC0.75□□□□□ -2.29
NPAS2Q99743 SNORA75.3-201ENST00000391231 150 ntBASIC0.75□□□□□ -2.29
NPAS2Q99743 MIR1278-201ENST00000408753 81 ntBASIC0.75□□□□□ -2.29
NPAS2Q99743 Y_RNA.602-201ENST00000410535 92 ntBASIC0.75□□□□□ -2.29
NPAS2Q99743 AC006461.1-201ENST00000412637 326 ntBASIC0.75□□□□□ -2.29
NPAS2Q99743 POLR2KP2-201ENST00000438155 177 ntBASIC0.75□□□□□ -2.29
NPAS2Q99743 HMGN1P10-201ENST00000474557 553 ntBASIC0.75□□□□□ -2.29
NPAS2Q99743 RPL23AP54-201ENST00000495129 419 ntBASIC0.75□□□□□ -2.29
NPAS2Q99743 RNA5SP255-201ENST00000516370 107 ntBASIC0.75□□□□□ -2.29
NPAS2Q99743 MIR4300-201ENST00000581016 96 ntBASIC0.75□□□□□ -2.29
NPAS2Q99743 AC104695.3-201ENST00000604052 296 ntBASIC0.75□□□□□ -2.29
NPAS2Q99743 AC106800.4-201ENST00000614905 153 ntBASIC0.75□□□□□ -2.29
NPAS2Q99743 AL160413.1-201ENST00000622780 310 ntBASIC0.75□□□□□ -2.29
NPAS2Q99743 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.75□□□□□ -2.29
NPAS2Q99743 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
NPAS2Q99743 Y_RNA.105-201ENST00000363182 111 ntBASIC0.74□□□□□ -2.29
NPAS2Q99743 Y_RNA.138-201ENST00000363462 102 ntBASIC0.74□□□□□ -2.29
NPAS2Q99743 SNORD113-8-201ENST00000363497 74 ntBASIC0.74□□□□□ -2.29
NPAS2Q99743 RNA5SP325-201ENST00000363756 130 ntBASIC0.74□□□□□ -2.29
NPAS2Q99743 RNU1-133P-201ENST00000364867 167 ntBASIC0.74□□□□□ -2.29
NPAS2Q99743 Y_RNA.418-201ENST00000384029 102 ntBASIC0.74□□□□□ -2.29
NPAS2Q99743 MIR100-201ENST00000385259 80 ntBASIC0.74□□□□□ -2.29
NPAS2Q99743 RNU6-823P-201ENST00000391042 103 ntBASIC0.74□□□□□ -2.29
NPAS2Q99743 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.74□□□□□ -2.29
NPAS2Q99743 AC024067.1-201ENST00000426199 223 ntBASIC0.74□□□□□ -2.29
NPAS2Q99743 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.74□□□□□ -2.29
NPAS2Q99743 RNU7-115P-201ENST00000516433 55 ntBASIC0.74□□□□□ -2.29
NPAS2Q99743 SNORA18.7-201ENST00000516910 131 ntBASIC0.74□□□□□ -2.29
NPAS2Q99743 Y_RNA.713-201ENST00000517013 96 ntBASIC0.74□□□□□ -2.29
NPAS2Q99743 Y_RNA.715-201ENST00000517082 110 ntBASIC0.74□□□□□ -2.29
NPAS2Q99743 AC136628.3-201ENST00000521868 290 ntBASIC0.74□□□□□ -2.29
NPAS2Q99743 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.74□□□□□ -2.29
NPAS2Q99743 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.74□□□□□ -2.29
NPAS2Q99743 AC127455.1-201ENST00000565496 145 ntBASIC0.74□□□□□ -2.29
NPAS2Q99743 AP003357.1-201ENST00000604497 148 ntBASIC0.74□□□□□ -2.29
NPAS2Q99743 MIR376A1-201ENST00000616574 68 ntBASIC0.74□□□□□ -2.29
NPAS2Q99743 MIR548AY-201ENST00000617669 107 ntBASIC0.74□□□□□ -2.29
NPAS2Q99743 AC090574.1-201ENST00000623186 233 ntBASIC0.74□□□□□ -2.29
NPAS2Q99743 AC134026.1-201ENST00000623249 2239 ntBASIC0.74□□□□□ -2.29
NPAS2Q99743 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.74□□□□□ -2.29
NPAS2Q99743 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
NPAS2Q99743 Y_RNA.28-201ENST00000362554 111 ntBASIC0.73□□□□□ -2.29
NPAS2Q99743 Y_RNA.61-201ENST00000362835 102 ntBASIC0.73□□□□□ -2.29
NPAS2Q99743 RNU6-801P-201ENST00000364087 105 ntBASIC0.73□□□□□ -2.29
NPAS2Q99743 Y_RNA.203-201ENST00000364106 102 ntBASIC0.73□□□□□ -2.29
NPAS2Q99743 Y_RNA.216-201ENST00000364205 93 ntBASIC0.73□□□□□ -2.29
NPAS2Q99743 snoU2-30.1-201ENST00000365012 70 ntBASIC0.73□□□□□ -2.29
NPAS2Q99743 Y_RNA.389-201ENST00000383924 113 ntBASIC0.73□□□□□ -2.29
NPAS2Q99743 Y_RNA.393-201ENST00000383936 102 ntBASIC0.73□□□□□ -2.29
NPAS2Q99743 Y_RNA.535-201ENST00000384612 99 ntBASIC0.73□□□□□ -2.29
NPAS2Q99743 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
NPAS2Q99743 SNORA26.5-201ENST00000391215 123 ntBASIC0.73□□□□□ -2.29
NPAS2Q99743 AC004941.2-201ENST00000427009 228 ntBASIC0.73□□□□□ -2.29
NPAS2Q99743 FABP5P4-201ENST00000437203 171 ntBASIC0.73□□□□□ -2.29
NPAS2Q99743 RNU7-141P-201ENST00000459304 62 ntBASIC0.73□□□□□ -2.29
NPAS2Q99743 SEPT14P8-201ENST00000508026 178 ntBASIC0.73□□□□□ -2.29
NPAS2Q99743 RNU7-116P-201ENST00000516940 62 ntBASIC0.73□□□□□ -2.29
NPAS2Q99743 RNU6-897P-201ENST00000517135 105 ntBASIC0.73□□□□□ -2.29
NPAS2Q99743 SNORD113-5-201ENST00000607261 78 ntBASIC0.73□□□□□ -2.29
NPAS2Q99743 AC108706.1-201ENST00000611053 297 ntBASIC0.73□□□□□ -2.29
NPAS2Q99743 HSBP1P2-201ENST00000299671 229 ntBASIC0.72□□□□□ -2.29
NPAS2Q99743 SNORA25.3-201ENST00000363205 127 ntBASIC0.72□□□□□ -2.29
NPAS2Q99743 RNU6-1209P-201ENST00000363655 107 ntBASIC0.72□□□□□ -2.29
NPAS2Q99743 Y_RNA.205-201ENST00000364128 113 ntBASIC0.72□□□□□ -2.29
NPAS2Q99743 AC117470.1-201ENST00000381974 330 ntBASIC0.72□□□□□ -2.29
NPAS2Q99743 Y_RNA.460-201ENST00000384255 102 ntBASIC0.72□□□□□ -2.29
NPAS2Q99743 MIR136-201ENST00000385207 82 ntBASIC0.72□□□□□ -2.29
NPAS2Q99743 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.72□□□□□ -2.29
NPAS2Q99743 HSPE1P25-201ENST00000455484 251 ntBASIC0.72□□□□□ -2.29
NPAS2Q99743 Y_RNA.631-201ENST00000459607 101 ntBASIC0.72□□□□□ -2.29
NPAS2Q99743 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.72□□□□□ -2.29
NPAS2Q99743 RNU7-41P-201ENST00000515917 61 ntBASIC0.72□□□□□ -2.29
NPAS2Q99743 MIR4714-201ENST00000580728 77 ntBASIC0.72□□□□□ -2.29
NPAS2Q99743 SNORA22B-201ENST00000383876 138 ntBASIC0.71□□□□□ -2.3
NPAS2Q99743 SNORA72.4-201ENST00000384174 132 ntBASIC0.71□□□□□ -2.3
NPAS2Q99743 MTCO2P33-201ENST00000402100 465 ntBASIC0.71□□□□□ -2.3
NPAS2Q99743 RNU6-101P-201ENST00000410323 104 ntBASIC0.71□□□□□ -2.3
NPAS2Q99743 SNORA36B-201ENST00000410438 131 ntBASIC0.71□□□□□ -2.3
NPAS2Q99743 RNU6-121P-201ENST00000410525 99 ntBASIC0.71□□□□□ -2.3
NPAS2Q99743 AC098869.1-201ENST00000481627 292 ntBASIC0.71□□□□□ -2.3
NPAS2Q99743 NDUFA4P2-201ENST00000489989 244 ntBASIC0.71□□□□□ -2.3
NPAS2Q99743 RNU6-496P-201ENST00000516145 99 ntBASIC0.71□□□□□ -2.3
NPAS2Q99743 RNU6-191P-201ENST00000516295 94 ntBASIC0.71□□□□□ -2.3
NPAS2Q99743 SNORA74.3-201ENST00000517108 154 ntBASIC0.71□□□□□ -2.3
NPAS2Q99743 JPX_2.1-201ENST00000614161 69 ntBASIC0.71□□□□□ -2.3
NPAS2Q99743 MIR6866-201ENST00000638146 69 ntBASIC0.71□□□□□ -2.3
NPAS2Q99743 Y_RNA.183-201ENST00000363882 113 ntBASIC0.7□□□□□ -2.3
NPAS2Q99743 SNORD14E-201ENST00000364009 85 ntBASIC0.7□□□□□ -2.3
NPAS2Q99743 Y_RNA.222-201ENST00000364264 102 ntBASIC0.7□□□□□ -2.3
NPAS2Q99743 Y_RNA.527-201ENST00000384573 102 ntBASIC0.7□□□□□ -2.3
NPAS2Q99743 MIR520C-201ENST00000385005 87 ntBASIC0.7□□□□□ -2.3
NPAS2Q99743 SNORD115-46-201ENST00000390982 71 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms