Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 MIR934-201ENST00000401241 83 ntBASIC1.6□□□□□ -2.15
SIN3AQ96ST3 MIR548H3-201ENST00000408771 118 ntBASIC1.6□□□□□ -2.15
SIN3AQ96ST3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.6□□□□□ -2.15
SIN3AQ96ST3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.6□□□□□ -2.15
SIN3AQ96ST3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.6□□□□□ -2.15
SIN3AQ96ST3 Y_RNA.54-201ENST00000362766 105 ntBASIC1.59□□□□□ -2.15
SIN3AQ96ST3 RNU6-1209P-201ENST00000363655 107 ntBASIC1.59□□□□□ -2.15
SIN3AQ96ST3 Y_RNA.307-201ENST00000365022 117 ntBASIC1.59□□□□□ -2.15
SIN3AQ96ST3 Y_RNA.416-201ENST00000384014 113 ntBASIC1.59□□□□□ -2.15
SIN3AQ96ST3 Y_RNA.477-201ENST00000384352 108 ntBASIC1.59□□□□□ -2.15
SIN3AQ96ST3 AL591704.2-201ENST00000421658 181 ntBASIC1.59□□□□□ -2.15
SIN3AQ96ST3 SNRPGP10-201ENST00000432323 225 ntBASIC1.59□□□□□ -2.15
SIN3AQ96ST3 snoU13.9-201ENST00000458927 103 ntBASIC1.59□□□□□ -2.15
SIN3AQ96ST3 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.59□□□□□ -2.15
SIN3AQ96ST3 AC004817.2-201ENST00000561794 651 ntBASIC1.59□□□□□ -2.15
SIN3AQ96ST3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.59□□□□□ -2.15
SIN3AQ96ST3 SNORD114-21-201ENST00000606412 72 ntBASIC1.59□□□□□ -2.15
SIN3AQ96ST3 SNORD3E-202ENST00000627253 216 ntBASIC1.59□□□□□ -2.15
SIN3AQ96ST3 ICE2P2-201ENST00000483823 2787 ntBASIC1.59□□□□□ -2.15
SIN3AQ96ST3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
SIN3AQ96ST3 MIR96-201ENST00000362288 78 ntBASIC1.58□□□□□ -2.16
SIN3AQ96ST3 Y_RNA.76-201ENST00000362931 109 ntBASIC1.58□□□□□ -2.16
SIN3AQ96ST3 RNU4-10P-201ENST00000364383 140 ntBASIC1.58□□□□□ -2.16
SIN3AQ96ST3 Y_RNA.539-201ENST00000384635 107 ntBASIC1.58□□□□□ -2.16
SIN3AQ96ST3 MIR513A1-201ENST00000385138 129 ntBASIC1.58□□□□□ -2.16
SIN3AQ96ST3 Y_RNA.590-201ENST00000410140 107 ntBASIC1.58□□□□□ -2.16
SIN3AQ96ST3 RNU6-383P-201ENST00000410864 94 ntBASIC1.58□□□□□ -2.16
SIN3AQ96ST3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.58□□□□□ -2.16
SIN3AQ96ST3 RNU1-98P-201ENST00000458992 160 ntBASIC1.58□□□□□ -2.16
SIN3AQ96ST3 COX6CP14-201ENST00000469580 174 ntBASIC1.58□□□□□ -2.16
SIN3AQ96ST3 NDUFA4P2-201ENST00000489989 244 ntBASIC1.58□□□□□ -2.16
SIN3AQ96ST3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.58□□□□□ -2.16
SIN3AQ96ST3 Y_RNA.673-201ENST00000516306 88 ntBASIC1.58□□□□□ -2.16
SIN3AQ96ST3 SUMO2P16-201ENST00000519475 264 ntBASIC1.58□□□□□ -2.16
SIN3AQ96ST3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.58□□□□□ -2.16
SIN3AQ96ST3 MIR4778-201ENST00000577635 80 ntBASIC1.58□□□□□ -2.16
SIN3AQ96ST3 MIR3128-201ENST00000581957 66 ntBASIC1.58□□□□□ -2.16
SIN3AQ96ST3 AC011921.3-201ENST00000605540 361 ntBASIC1.58□□□□□ -2.16
SIN3AQ96ST3 MIR6078-201ENST00000611069 100 ntBASIC1.58□□□□□ -2.16
SIN3AQ96ST3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
SIN3AQ96ST3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SIN3AQ96ST3 Y_RNA.20-201ENST00000362479 113 ntBASIC1.57□□□□□ -2.16
SIN3AQ96ST3 Y_RNA.293-201ENST00000364908 93 ntBASIC1.57□□□□□ -2.16
SIN3AQ96ST3 Y_RNA.447-201ENST00000384184 113 ntBASIC1.57□□□□□ -2.16
SIN3AQ96ST3 RPL30P13-201ENST00000418873 348 ntBASIC1.57□□□□□ -2.16
SIN3AQ96ST3 SNORD11-201ENST00000459124 84 ntBASIC1.57□□□□□ -2.16
SIN3AQ96ST3 AC120024.3-201ENST00000603167 156 ntBASIC1.57□□□□□ -2.16
SIN3AQ96ST3 MIR8063-201ENST00000621930 81 ntBASIC1.57□□□□□ -2.16
SIN3AQ96ST3 Y_RNA.60-201ENST00000362831 98 ntBASIC1.56□□□□□ -2.16
SIN3AQ96ST3 Y_RNA.164-201ENST00000363709 102 ntBASIC1.56□□□□□ -2.16
SIN3AQ96ST3 SNORD114-27-201ENST00000363766 70 ntBASIC1.56□□□□□ -2.16
SIN3AQ96ST3 SNORD27-201ENST00000363981 72 ntBASIC1.56□□□□□ -2.16
SIN3AQ96ST3 SNORD1A-201ENST00000364968 72 ntBASIC1.56□□□□□ -2.16
SIN3AQ96ST3 SNORD58.1-201ENST00000391313 66 ntBASIC1.56□□□□□ -2.16
SIN3AQ96ST3 MLLT10P1-201ENST00000418346 262 ntBASIC1.56□□□□□ -2.16
SIN3AQ96ST3 PIGPP3-201ENST00000425307 415 ntBASIC1.56□□□□□ -2.16
SIN3AQ96ST3 AC093850.1-201ENST00000454121 251 ntBASIC1.56□□□□□ -2.16
SIN3AQ96ST3 CYCTP-201ENST00000504253 315 ntBASIC1.56□□□□□ -2.16
SIN3AQ96ST3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.56□□□□□ -2.16
SIN3AQ96ST3 RNU7-12P-201ENST00000516030 62 ntBASIC1.56□□□□□ -2.16
SIN3AQ96ST3 SNORD116-28-201ENST00000516123 91 ntBASIC1.56□□□□□ -2.16
SIN3AQ96ST3 AC100767.1-201ENST00000528178 123 ntBASIC1.56□□□□□ -2.16
SIN3AQ96ST3 RPL23AP91-201ENST00000569211 455 ntBASIC1.56□□□□□ -2.16
SIN3AQ96ST3 BX284668.6-201ENST00000606899 438 ntBASIC1.56□□□□□ -2.16
SIN3AQ96ST3 AL021707.8-201ENST00000609428 183 ntBASIC1.56□□□□□ -2.16
SIN3AQ96ST3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
SIN3AQ96ST3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SIN3AQ96ST3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
SIN3AQ96ST3 RNU6-833P-201ENST00000363486 107 ntBASIC1.55□□□□□ -2.16
SIN3AQ96ST3 Y_RNA.572-201ENST00000384757 98 ntBASIC1.55□□□□□ -2.16
SIN3AQ96ST3 MIR526A2-201ENST00000390198 65 ntBASIC1.55□□□□□ -2.16
SIN3AQ96ST3 RNU6-131P-201ENST00000391144 107 ntBASIC1.55□□□□□ -2.16
SIN3AQ96ST3 RNA5SP247-201ENST00000411181 105 ntBASIC1.55□□□□□ -2.16
SIN3AQ96ST3 AC114811.1-201ENST00000507207 168 ntBASIC1.55□□□□□ -2.16
SIN3AQ96ST3 MIR2681-201ENST00000581814 105 ntBASIC1.55□□□□□ -2.16
SIN3AQ96ST3 MIR4781-201ENST00000585250 76 ntBASIC1.55□□□□□ -2.16
SIN3AQ96ST3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.55□□□□□ -2.16
SIN3AQ96ST3 JPX_2.1-201ENST00000614161 69 ntBASIC1.55□□□□□ -2.16
SIN3AQ96ST3 AC027279.3-201ENST00000625055 122 ntBASIC1.55□□□□□ -2.16
SIN3AQ96ST3 MIR6767-201ENST00000637302 66 ntBASIC1.55□□□□□ -2.16
SIN3AQ96ST3 MIR367-201ENST00000362299 68 ntBASIC1.54□□□□□ -2.16
SIN3AQ96ST3 SNORD50B-201ENST00000364995 70 ntBASIC1.54□□□□□ -2.16
SIN3AQ96ST3 Y_RNA.304-201ENST00000365011 112 ntBASIC1.54□□□□□ -2.16
SIN3AQ96ST3 RNA5SP259-201ENST00000365541 109 ntBASIC1.54□□□□□ -2.16
SIN3AQ96ST3 Y_RNA.478-201ENST00000384358 107 ntBASIC1.54□□□□□ -2.16
SIN3AQ96ST3 RNU6-163P-201ENST00000384396 106 ntBASIC1.54□□□□□ -2.16
SIN3AQ96ST3 MIR1285-1-201ENST00000408593 84 ntBASIC1.54□□□□□ -2.16
SIN3AQ96ST3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.54□□□□□ -2.16
SIN3AQ96ST3 RNU6-1023P-201ENST00000516137 106 ntBASIC1.54□□□□□ -2.16
SIN3AQ96ST3 Y_RNA.679-201ENST00000516416 91 ntBASIC1.54□□□□□ -2.16
SIN3AQ96ST3 SNORD45.4-201ENST00000516629 73 ntBASIC1.54□□□□□ -2.16
SIN3AQ96ST3 AL442067.1-201ENST00000613261 223 ntBASIC1.54□□□□□ -2.16
SIN3AQ96ST3 Y_RNA.802-201ENST00000614892 130 ntBASIC1.54□□□□□ -2.16
SIN3AQ96ST3 AC106754.2-201ENST00000623006 233 ntBASIC1.54□□□□□ -2.16
SIN3AQ96ST3 Y_RNA.269-201ENST00000364685 89 ntBASIC1.53□□□□□ -2.16
SIN3AQ96ST3 MIR891A-201ENST00000401237 79 ntBASIC1.53□□□□□ -2.16
SIN3AQ96ST3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.53□□□□□ -2.16
SIN3AQ96ST3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.53□□□□□ -2.16
SIN3AQ96ST3 AC092991.1-201ENST00000477176 376 ntBASIC1.53□□□□□ -2.16
SIN3AQ96ST3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms