Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AL162730.1-201ENST00000605734 292 ntBASIC0.3□□□□□ -2.36
USP47Q96K76 AC022441.3-201ENST00000605737 136 ntBASIC0.3□□□□□ -2.36
USP47Q96K76 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.3□□□□□ -2.36
USP47Q96K76 RNU6-934P-201ENST00000365154 107 ntBASIC0.29□□□□□ -2.36
USP47Q96K76 RNU6-442P-201ENST00000383968 104 ntBASIC0.29□□□□□ -2.36
USP47Q96K76 SNORA51.10-201ENST00000384418 136 ntBASIC0.29□□□□□ -2.36
USP47Q96K76 MIR520H-201ENST00000385126 88 ntBASIC0.29□□□□□ -2.36
USP47Q96K76 MIR802-201ENST00000390235 94 ntBASIC0.29□□□□□ -2.36
USP47Q96K76 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
USP47Q96K76 RNU6-710P-201ENST00000410424 105 ntBASIC0.29□□□□□ -2.36
USP47Q96K76 RNU4-14P-201ENST00000410858 122 ntBASIC0.29□□□□□ -2.36
USP47Q96K76 snoU13.21-201ENST00000459368 105 ntBASIC0.29□□□□□ -2.36
USP47Q96K76 AC002350.1-201ENST00000490759 375 ntBASIC0.29□□□□□ -2.36
USP47Q96K76 RNU6-977P-201ENST00000516411 103 ntBASIC0.29□□□□□ -2.36
USP47Q96K76 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
USP47Q96K76 RNU7-116P-201ENST00000516940 62 ntBASIC0.29□□□□□ -2.36
USP47Q96K76 RBM11P1-201ENST00000604951 799 ntBASIC0.29□□□□□ -2.36
USP47Q96K76 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.29□□□□□ -2.36
USP47Q96K76 JPX_2.1-201ENST00000614161 69 ntBASIC0.29□□□□□ -2.36
USP47Q96K76 AC015726.2-201ENST00000620112 122 ntBASIC0.29□□□□□ -2.36
USP47Q96K76 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
USP47Q96K76 MIR520F-201ENST00000384824 87 ntBASIC0.28□□□□□ -2.36
USP47Q96K76 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.28□□□□□ -2.36
USP47Q96K76 AC069439.1-201ENST00000494739 167 ntBASIC0.28□□□□□ -2.36
USP47Q96K76 RNU7-4P-201ENST00000516961 62 ntBASIC0.28□□□□□ -2.36
USP47Q96K76 RNU7-181P-201ENST00000517234 74 ntBASIC0.28□□□□□ -2.36
USP47Q96K76 MIR5190-201ENST00000581537 80 ntBASIC0.28□□□□□ -2.36
USP47Q96K76 MTND1P7-201ENST00000632801 297 ntBASIC0.28□□□□□ -2.36
USP47Q96K76 MIRLET7D-201ENST00000362263 87 ntBASIC0.27□□□□□ -2.37
USP47Q96K76 RNU6-268P-201ENST00000364174 107 ntBASIC0.27□□□□□ -2.37
USP47Q96K76 Y_RNA.230-201ENST00000364348 109 ntBASIC0.27□□□□□ -2.37
USP47Q96K76 Y_RNA.310-201ENST00000365063 113 ntBASIC0.27□□□□□ -2.37
USP47Q96K76 RNU6-580P-201ENST00000365159 107 ntBASIC0.27□□□□□ -2.37
USP47Q96K76 Y_RNA.376-201ENST00000365638 108 ntBASIC0.27□□□□□ -2.37
USP47Q96K76 Y_RNA.537-201ENST00000384626 109 ntBASIC0.27□□□□□ -2.37
USP47Q96K76 Y_RNA.646-201ENST00000410980 101 ntBASIC0.27□□□□□ -2.37
USP47Q96K76 MTND1P2-201ENST00000430604 821 ntBASIC0.27□□□□□ -2.37
USP47Q96K76 SNRPGP14-201ENST00000435400 219 ntBASIC0.27□□□□□ -2.37
USP47Q96K76 MTATP6P26-201ENST00000445926 662 ntBASIC0.27□□□□□ -2.37
USP47Q96K76 NDUFA4P2-201ENST00000489989 244 ntBASIC0.27□□□□□ -2.37
USP47Q96K76 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.27□□□□□ -2.37
USP47Q96K76 MIR4791-201ENST00000607666 84 ntBASIC0.27□□□□□ -2.37
USP47Q96K76 MIR18A-201ENST00000362310 71 ntBASIC0.26□□□□□ -2.37
USP47Q96K76 RNU6-1209P-201ENST00000363655 107 ntBASIC0.26□□□□□ -2.37
USP47Q96K76 SNORD45.3-201ENST00000363836 72 ntBASIC0.26□□□□□ -2.37
USP47Q96K76 U8.7-201ENST00000364940 136 ntBASIC0.26□□□□□ -2.37
USP47Q96K76 Y_RNA.318-201ENST00000365131 97 ntBASIC0.26□□□□□ -2.37
USP47Q96K76 Y_RNA.476-201ENST00000384347 108 ntBASIC0.26□□□□□ -2.37
USP47Q96K76 Y_RNA.518-201ENST00000384552 113 ntBASIC0.26□□□□□ -2.37
USP47Q96K76 RNU6-205P-201ENST00000390858 107 ntBASIC0.26□□□□□ -2.37
USP47Q96K76 MTCO2P33-201ENST00000402100 465 ntBASIC0.26□□□□□ -2.37
USP47Q96K76 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.26□□□□□ -2.37
USP47Q96K76 SNORD83.1-201ENST00000411362 77 ntBASIC0.26□□□□□ -2.37
USP47Q96K76 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.26□□□□□ -2.37
USP47Q96K76 RPL23AP54-201ENST00000495129 419 ntBASIC0.26□□□□□ -2.37
USP47Q96K76 AC024405.2-202ENST00000532731 184 ntBASIC0.26□□□□□ -2.37
USP47Q96K76 MIR5589-201ENST00000579442 60 ntBASIC0.26□□□□□ -2.37
USP47Q96K76 MIR5093-201ENST00000583199 100 ntBASIC0.26□□□□□ -2.37
USP47Q96K76 AC087685.1-201ENST00000587507 141 ntBASIC0.26□□□□□ -2.37
USP47Q96K76 TPTEP1-208ENST00000636884 213 ntBASIC0.26□□□□□ -2.37
USP47Q96K76 AC090625.1-201ENST00000357130 210 ntBASIC0.25□□□□□ -2.37
USP47Q96K76 RNU6-1175P-201ENST00000365200 107 ntBASIC0.25□□□□□ -2.37
USP47Q96K76 RNU6-708P-201ENST00000384217 107 ntBASIC0.25□□□□□ -2.37
USP47Q96K76 RNU6-310P-201ENST00000384655 107 ntBASIC0.25□□□□□ -2.37
USP47Q96K76 SNORA75.6-201ENST00000391318 127 ntBASIC0.25□□□□□ -2.37
USP47Q96K76 AC015818.7-201ENST00000428754 109 ntBASIC0.25□□□□□ -2.37
USP47Q96K76 AC087499.7-201ENST00000441958 109 ntBASIC0.25□□□□□ -2.37
USP47Q96K76 RN7SKP295-201ENST00000517264 153 ntBASIC0.25□□□□□ -2.37
USP47Q96K76 MIR3612-201ENST00000579753 87 ntBASIC0.25□□□□□ -2.37
USP47Q96K76 AP000753.3-201ENST00000604083 169 ntBASIC0.25□□□□□ -2.37
USP47Q96K76 AP003357.1-201ENST00000604497 148 ntBASIC0.25□□□□□ -2.37
USP47Q96K76 Y_RNA.456-201ENST00000384232 111 ntBASIC0.24□□□□□ -2.37
USP47Q96K76 RNU6-679P-201ENST00000391003 106 ntBASIC0.24□□□□□ -2.37
USP47Q96K76 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.24□□□□□ -2.37
USP47Q96K76 MTND4P17-201ENST00000470444 350 ntBASIC0.24□□□□□ -2.37
USP47Q96K76 RNU6-358P-201ENST00000516564 75 ntBASIC0.24□□□□□ -2.37
USP47Q96K76 MIR4771-2-201ENST00000577758 74 ntBASIC0.24□□□□□ -2.37
USP47Q96K76 MIR4771-1-201ENST00000582617 74 ntBASIC0.24□□□□□ -2.37
USP47Q96K76 MIR5690-201ENST00000583739 73 ntBASIC0.24□□□□□ -2.37
USP47Q96K76 AC098679.4-201ENST00000624241 654 ntBASIC0.24□□□□□ -2.37
USP47Q96K76 Y_RNA.314-201ENST00000365114 102 ntBASIC0.23□□□□□ -2.37
USP47Q96K76 MT-TN-201ENST00000387400 73 ntBASIC0.23□□□□□ -2.37
USP47Q96K76 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.23□□□□□ -2.37
USP47Q96K76 AL590004.1-201ENST00000405321 300 ntBASIC0.23□□□□□ -2.37
USP47Q96K76 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.23□□□□□ -2.37
USP47Q96K76 RNU6-370P-201ENST00000411008 104 ntBASIC0.23□□□□□ -2.37
USP47Q96K76 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.23□□□□□ -2.37
USP47Q96K76 AC005042.3-201ENST00000453230 174 ntBASIC0.23□□□□□ -2.37
USP47Q96K76 MTCO3P10-201ENST00000455912 772 ntBASIC0.23□□□□□ -2.37
USP47Q96K76 AC091951.2-201ENST00000500762 203 ntBASIC0.23□□□□□ -2.37
USP47Q96K76 RNU7-115P-201ENST00000516433 55 ntBASIC0.23□□□□□ -2.37
USP47Q96K76 U2.1-201ENST00000618978 145 ntBASIC0.23□□□□□ -2.37
USP47Q96K76 RNU6-1188P-201ENST00000363795 107 ntBASIC0.22□□□□□ -2.37
USP47Q96K76 SNORA1.2-201ENST00000365189 134 ntBASIC0.22□□□□□ -2.37
USP47Q96K76 MIR1278-201ENST00000408753 81 ntBASIC0.22□□□□□ -2.37
USP47Q96K76 RNU6-847P-201ENST00000411115 108 ntBASIC0.22□□□□□ -2.37
USP47Q96K76 AC096644.2-201ENST00000429278 159 ntBASIC0.22□□□□□ -2.37
USP47Q96K76 Y_RNA.635-201ENST00000459041 101 ntBASIC0.22□□□□□ -2.37
USP47Q96K76 MIR4802-201ENST00000581881 80 ntBASIC0.22□□□□□ -2.37
USP47Q96K76 LARP7P1-201ENST00000605576 316 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 211.5 ms