Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AC138907.4-201ENST00000570107 226 ntBASIC2.64□□□□□ -1.99
DDX11Q96FC9 MIR5007-201ENST00000583098 95 ntBASIC2.64□□□□□ -1.99
DDX11Q96FC9 AC007229.1-201ENST00000590455 412 ntBASIC2.64□□□□□ -1.99
DDX11Q96FC9 AC108081.1-201ENST00000604358 221 ntBASIC2.64□□□□□ -1.99
DDX11Q96FC9 SNORD14A-201ENST00000606526 91 ntBASIC2.64□□□□□ -1.99
DDX11Q96FC9 AL353149.1-201ENST00000610667 244 ntBASIC2.64□□□□□ -1.99
DDX11Q96FC9 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.64□□□□□ -1.99
DDX11Q96FC9 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.64□□□□□ -1.99
DDX11Q96FC9 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
DDX11Q96FC9 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
DDX11Q96FC9 Y_RNA.43-201ENST00000362670 111 ntBASIC2.63□□□□□ -1.99
DDX11Q96FC9 Y_RNA.253-201ENST00000364562 112 ntBASIC2.63□□□□□ -1.99
DDX11Q96FC9 RNU1-148P-201ENST00000384472 162 ntBASIC2.63□□□□□ -1.99
DDX11Q96FC9 RNA5SP270-201ENST00000411361 118 ntBASIC2.63□□□□□ -1.99
DDX11Q96FC9 AC063976.4-201ENST00000421971 163 ntBASIC2.63□□□□□ -1.99
DDX11Q96FC9 MRPS17P9-201ENST00000511924 393 ntBASIC2.63□□□□□ -1.99
DDX11Q96FC9 RNU6-237P-201ENST00000515985 71 ntBASIC2.63□□□□□ -1.99
DDX11Q96FC9 IGLV3-17-201ENST00000519099 244 ntBASIC2.63□□□□□ -1.99
DDX11Q96FC9 AC018630.2-201ENST00000534866 2403 ntBASIC2.62□□□□□ -1.99
DDX11Q96FC9 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.62□□□□□ -1.99
DDX11Q96FC9 RNU6-147P-201ENST00000383983 107 ntBASIC2.62□□□□□ -1.99
DDX11Q96FC9 RNU11-5P-201ENST00000391216 129 ntBASIC2.62□□□□□ -1.99
DDX11Q96FC9 Y_RNA.621-201ENST00000411065 96 ntBASIC2.62□□□□□ -1.99
DDX11Q96FC9 AC233266.1-201ENST00000454518 96 ntBASIC2.62□□□□□ -1.99
DDX11Q96FC9 Y_RNA.651-201ENST00000459380 103 ntBASIC2.62□□□□□ -1.99
DDX11Q96FC9 RNU5E-3P-201ENST00000515913 68 ntBASIC2.62□□□□□ -1.99
DDX11Q96FC9 RNU6-1061P-201ENST00000516530 99 ntBASIC2.62□□□□□ -1.99
DDX11Q96FC9 RNU6-504P-201ENST00000516568 104 ntBASIC2.62□□□□□ -1.99
DDX11Q96FC9 AL358944.1-201ENST00000528537 144 ntBASIC2.62□□□□□ -1.99
DDX11Q96FC9 AL670379.3-201ENST00000605040 251 ntBASIC2.62□□□□□ -1.99
DDX11Q96FC9 AC242852.1-201ENST00000612151 96 ntBASIC2.62□□□□□ -1.99
DDX11Q96FC9 AC245884.12-201ENST00000615364 59 ntBASIC2.62□□□□□ -1.99
DDX11Q96FC9 AC244015.1-201ENST00000622301 99 ntBASIC2.62□□□□□ -1.99
DDX11Q96FC9 MIR203B-201ENST00000636080 86 ntBASIC2.62□□□□□ -1.99
DDX11Q96FC9 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
DDX11Q96FC9 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
DDX11Q96FC9 SNORA22-201ENST00000383907 134 ntBASIC2.61□□□□□ -1.99
DDX11Q96FC9 SNORA1-201ENST00000384107 130 ntBASIC2.61□□□□□ -1.99
DDX11Q96FC9 MIR221-201ENST00000385135 110 ntBASIC2.61□□□□□ -1.99
DDX11Q96FC9 EDDM3CP-201ENST00000415977 425 ntBASIC2.61□□□□□ -1.99
DDX11Q96FC9 SNRPGP10-201ENST00000432323 225 ntBASIC2.61□□□□□ -1.99
DDX11Q96FC9 AC011753.1-201ENST00000451001 220 ntBASIC2.61□□□□□ -1.99
DDX11Q96FC9 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.61□□□□□ -1.99
DDX11Q96FC9 RNA5SP236-201ENST00000516169 116 ntBASIC2.61□□□□□ -1.99
DDX11Q96FC9 RNU6-341P-201ENST00000516973 96 ntBASIC2.61□□□□□ -1.99
DDX11Q96FC9 AC026271.5-201ENST00000577873 130 ntBASIC2.61□□□□□ -1.99
DDX11Q96FC9 AL022345.2-201ENST00000606307 135 ntBASIC2.61□□□□□ -1.99
DDX11Q96FC9 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.61□□□□□ -1.99
DDX11Q96FC9 AL359075.3-201ENST00000613288 217 ntBASIC2.61□□□□□ -1.99
DDX11Q96FC9 MIR6079-201ENST00000635807 62 ntBASIC2.61□□□□□ -1.99
DDX11Q96FC9 MIR4679-1-201ENST00000637619 75 ntBASIC2.61□□□□□ -1.99
DDX11Q96FC9 SNORD114-1-201ENST00000362705 72 ntBASIC2.6□□□□□ -1.99
DDX11Q96FC9 RNU6-888P-201ENST00000363010 101 ntBASIC2.6□□□□□ -1.99
DDX11Q96FC9 RNU6-1292P-201ENST00000383856 107 ntBASIC2.6□□□□□ -1.99
DDX11Q96FC9 SNORD24-201ENST00000383884 75 ntBASIC2.6□□□□□ -1.99
DDX11Q96FC9 MIR1289-2-201ENST00000408360 111 ntBASIC2.6□□□□□ -1.99
DDX11Q96FC9 SRIP3-201ENST00000413200 219 ntBASIC2.6□□□□□ -1.99
DDX11Q96FC9 RN7SKP19-201ENST00000516016 252 ntBASIC2.6□□□□□ -1.99
DDX11Q96FC9 RNU6-781P-201ENST00000516377 101 ntBASIC2.6□□□□□ -1.99
DDX11Q96FC9 RNA5SP170-201ENST00000517150 101 ntBASIC2.6□□□□□ -1.99
DDX11Q96FC9 MIR5694-201ENST00000581190 76 ntBASIC2.6□□□□□ -1.99
DDX11Q96FC9 AC008507.4-201ENST00000585464 127 ntBASIC2.6□□□□□ -1.99
DDX11Q96FC9 AC022202.1-201ENST00000613515 211 ntBASIC2.6□□□□□ -1.99
DDX11Q96FC9 AC022513.1-201ENST00000624512 117 ntBASIC2.6□□□□□ -1.99
DDX11Q96FC9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.6□□□□□ -1.99
DDX11Q96FC9 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
DDX11Q96FC9 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.6□□□□□ -1.99
DDX11Q96FC9 Y_RNA.267-201ENST00000364679 109 ntBASIC2.59□□□□□ -1.99
DDX11Q96FC9 SNORD61-201ENST00000384252 73 ntBASIC2.59□□□□□ -1.99
DDX11Q96FC9 MIR548A2-201ENST00000384956 97 ntBASIC2.59□□□□□ -1.99
DDX11Q96FC9 RNU1-131P-201ENST00000458943 161 ntBASIC2.59□□□□□ -1.99
DDX11Q96FC9 AC104435.1-201ENST00000483483 166 ntBASIC2.59□□□□□ -1.99
DDX11Q96FC9 MIR3129-201ENST00000581095 76 ntBASIC2.59□□□□□ -1.99
DDX11Q96FC9 MIR4769-201ENST00000584126 77 ntBASIC2.59□□□□□ -1.99
DDX11Q96FC9 AL591926.4-201ENST00000616895 298 ntBASIC2.59□□□□□ -1.99
DDX11Q96FC9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.59□□□□□ -1.99
DDX11Q96FC9 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.58□□□□□ -2
DDX11Q96FC9 Y_RNA.99-201ENST00000363138 105 ntBASIC2.58□□□□□ -2
DDX11Q96FC9 RNU6-1255P-201ENST00000363434 112 ntBASIC2.58□□□□□ -2
DDX11Q96FC9 SNORA3A-201ENST00000364113 130 ntBASIC2.58□□□□□ -2
DDX11Q96FC9 RNA5SP37-201ENST00000365420 130 ntBASIC2.58□□□□□ -2
DDX11Q96FC9 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.58□□□□□ -2
DDX11Q96FC9 HMGN2P3-201ENST00000433603 273 ntBASIC2.58□□□□□ -2
DDX11Q96FC9 AC099677.2-201ENST00000436385 175 ntBASIC2.58□□□□□ -2
DDX11Q96FC9 AF228730.3-201ENST00000436691 102 ntBASIC2.58□□□□□ -2
DDX11Q96FC9 HMGN2P5-201ENST00000436882 273 ntBASIC2.58□□□□□ -2
DDX11Q96FC9 MTATP6P21-201ENST00000440681 189 ntBASIC2.58□□□□□ -2
DDX11Q96FC9 AL606517.2-201ENST00000442855 241 ntBASIC2.58□□□□□ -2
DDX11Q96FC9 AC087685.1-201ENST00000587507 141 ntBASIC2.58□□□□□ -2
DDX11Q96FC9 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.58□□□□□ -2
DDX11Q96FC9 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.57□□□□□ -2
DDX11Q96FC9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
DDX11Q96FC9 SNORA1B-201ENST00000362535 133 ntBASIC2.57□□□□□ -2
DDX11Q96FC9 Y_RNA.35-201ENST00000362601 101 ntBASIC2.57□□□□□ -2
DDX11Q96FC9 Y_RNA.346-201ENST00000365385 112 ntBASIC2.57□□□□□ -2
DDX11Q96FC9 SNORD116-21-201ENST00000384507 92 ntBASIC2.57□□□□□ -2
DDX11Q96FC9 MIR548A3-201ENST00000385297 97 ntBASIC2.57□□□□□ -2
DDX11Q96FC9 SNORA11.4-201ENST00000408823 129 ntBASIC2.57□□□□□ -2
DDX11Q96FC9 AL021397.1-201ENST00000451806 248 ntBASIC2.57□□□□□ -2
DDX11Q96FC9 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms