Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 SNRPGP14-201ENST00000435400 219 ntBASIC0.61□□□□□ -2.31
PTP4A1Q93096 NDUFA4P2-201ENST00000489989 244 ntBASIC0.61□□□□□ -2.31
PTP4A1Q93096 RNU4-54P-201ENST00000516428 129 ntBASIC0.61□□□□□ -2.31
PTP4A1Q93096 RNU4-77P-201ENST00000516692 156 ntBASIC0.61□□□□□ -2.31
PTP4A1Q93096 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.61□□□□□ -2.31
PTP4A1Q93096 AC011195.1-201ENST00000578177 177 ntBASIC0.61□□□□□ -2.31
PTP4A1Q93096 AL590095.2-201ENST00000604136 117 ntBASIC0.61□□□□□ -2.31
PTP4A1Q93096 AC006441.5-201ENST00000612680 209 ntBASIC0.61□□□□□ -2.31
PTP4A1Q93096 Y_RNA.143-201ENST00000363520 106 ntBASIC0.6□□□□□ -2.31
PTP4A1Q93096 RNU6-654P-201ENST00000364373 107 ntBASIC0.6□□□□□ -2.31
PTP4A1Q93096 Y_RNA.471-201ENST00000384312 102 ntBASIC0.6□□□□□ -2.31
PTP4A1Q93096 RNU6-937P-201ENST00000384325 106 ntBASIC0.6□□□□□ -2.31
PTP4A1Q93096 MIR499A-201ENST00000384903 122 ntBASIC0.6□□□□□ -2.31
PTP4A1Q93096 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.6□□□□□ -2.31
PTP4A1Q93096 MIR1302-7-201ENST00000408841 72 ntBASIC0.6□□□□□ -2.31
PTP4A1Q93096 RNU4-30P-201ENST00000410245 143 ntBASIC0.6□□□□□ -2.31
PTP4A1Q93096 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.6□□□□□ -2.31
PTP4A1Q93096 RNU7-141P-201ENST00000459304 62 ntBASIC0.6□□□□□ -2.31
PTP4A1Q93096 CYP3A137P-201ENST00000562436 69 ntBASIC0.6□□□□□ -2.31
PTP4A1Q93096 MIR3145-201ENST00000580727 82 ntBASIC0.6□□□□□ -2.31
PTP4A1Q93096 AC012433.1-201ENST00000588916 398 ntBASIC0.6□□□□□ -2.31
PTP4A1Q93096 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.6□□□□□ -2.31
PTP4A1Q93096 MIR377-201ENST00000362145 69 ntBASIC0.59□□□□□ -2.31
PTP4A1Q93096 SNORA72.4-201ENST00000384174 132 ntBASIC0.59□□□□□ -2.31
PTP4A1Q93096 MTND1P14-201ENST00000427400 950 ntBASIC0.59□□□□□ -2.31
PTP4A1Q93096 AC082651.2-201ENST00000496833 166 ntBASIC0.59□□□□□ -2.31
PTP4A1Q93096 RNU6-475P-201ENST00000516073 104 ntBASIC0.59□□□□□ -2.31
PTP4A1Q93096 MIR4791-201ENST00000607666 84 ntBASIC0.59□□□□□ -2.31
PTP4A1Q93096 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.59□□□□□ -2.31
PTP4A1Q93096 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.59□□□□□ -2.32
PTP4A1Q93096 RNU6-144P-201ENST00000383951 107 ntBASIC0.58□□□□□ -2.32
PTP4A1Q93096 Y_RNA.496-201ENST00000384444 101 ntBASIC0.58□□□□□ -2.32
PTP4A1Q93096 RNU6-1009P-201ENST00000390996 107 ntBASIC0.58□□□□□ -2.32
PTP4A1Q93096 RNA5SP222-201ENST00000411039 105 ntBASIC0.58□□□□□ -2.32
PTP4A1Q93096 RPS29P1-201ENST00000465274 159 ntBASIC0.58□□□□□ -2.32
PTP4A1Q93096 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.58□□□□□ -2.32
PTP4A1Q93096 DEFB108E-201ENST00000524692 240 ntBASIC0.58□□□□□ -2.32
PTP4A1Q93096 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.58□□□□□ -2.32
PTP4A1Q93096 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.58□□□□□ -2.32
PTP4A1Q93096 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
PTP4A1Q93096 AC068700.1-201ENST00000565862 3754 ntBASIC0.57□□□□□ -2.32
PTP4A1Q93096 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.57□□□□□ -2.32
PTP4A1Q93096 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
PTP4A1Q93096 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
PTP4A1Q93096 RNU6-899P-201ENST00000363947 107 ntBASIC0.57□□□□□ -2.32
PTP4A1Q93096 MIR570-201ENST00000384917 97 ntBASIC0.57□□□□□ -2.32
PTP4A1Q93096 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
PTP4A1Q93096 AC244098.3-201ENST00000424803 96 ntBASIC0.57□□□□□ -2.32
PTP4A1Q93096 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.57□□□□□ -2.32
PTP4A1Q93096 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.57□□□□□ -2.32
PTP4A1Q93096 RNU7-181P-201ENST00000517234 74 ntBASIC0.57□□□□□ -2.32
PTP4A1Q93096 AC133485.1-201ENST00000567176 124 ntBASIC0.57□□□□□ -2.32
PTP4A1Q93096 AC138907.6-201ENST00000568401 126 ntBASIC0.57□□□□□ -2.32
PTP4A1Q93096 RNU4-80P-201ENST00000363200 141 ntBASIC0.56□□□□□ -2.32
PTP4A1Q93096 Y_RNA.390-201ENST00000383932 102 ntBASIC0.56□□□□□ -2.32
PTP4A1Q93096 SNORA36.2-201ENST00000384004 127 ntBASIC0.56□□□□□ -2.32
PTP4A1Q93096 Y_RNA.676-201ENST00000516393 96 ntBASIC0.56□□□□□ -2.32
PTP4A1Q93096 AC040926.1-201ENST00000530195 238 ntBASIC0.56□□□□□ -2.32
PTP4A1Q93096 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.56□□□□□ -2.32
PTP4A1Q93096 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.56□□□□□ -2.32
PTP4A1Q93096 AC005357.1-201ENST00000588399 301 ntBASIC0.56□□□□□ -2.32
PTP4A1Q93096 AC243994.1-201ENST00000618627 109 ntBASIC0.56□□□□□ -2.32
PTP4A1Q93096 AC104985.2-201ENST00000620598 500 ntBASIC0.56□□□□□ -2.32
PTP4A1Q93096 RNU4-45P-201ENST00000365469 141 ntBASIC0.55□□□□□ -2.32
PTP4A1Q93096 RNU6-945P-201ENST00000383947 107 ntBASIC0.55□□□□□ -2.32
PTP4A1Q93096 Y_RNA.424-201ENST00000384063 103 ntBASIC0.55□□□□□ -2.32
PTP4A1Q93096 MIR508-201ENST00000384857 115 ntBASIC0.55□□□□□ -2.32
PTP4A1Q93096 RNA5SP95-201ENST00000410319 137 ntBASIC0.55□□□□□ -2.32
PTP4A1Q93096 SNORD11-201ENST00000459124 84 ntBASIC0.55□□□□□ -2.32
PTP4A1Q93096 MIR4264-201ENST00000583520 66 ntBASIC0.55□□□□□ -2.32
PTP4A1Q93096 uc_338.4-201ENST00000616635 176 ntBASIC0.55□□□□□ -2.32
PTP4A1Q93096 MIR6788-201ENST00000618842 66 ntBASIC0.55□□□□□ -2.32
PTP4A1Q93096 MTND1P7-201ENST00000632801 297 ntBASIC0.55□□□□□ -2.32
PTP4A1Q93096 Y_RNA.263-201ENST00000364659 114 ntBASIC0.54□□□□□ -2.32
PTP4A1Q93096 Y_RNA.356-201ENST00000365475 113 ntBASIC0.54□□□□□ -2.32
PTP4A1Q93096 SNORD72-201ENST00000390994 80 ntBASIC0.54□□□□□ -2.32
PTP4A1Q93096 MIR548J-201ENST00000408833 112 ntBASIC0.54□□□□□ -2.32
PTP4A1Q93096 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.54□□□□□ -2.32
PTP4A1Q93096 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.54□□□□□ -2.32
PTP4A1Q93096 snoU13.16-201ENST00000459350 104 ntBASIC0.54□□□□□ -2.32
PTP4A1Q93096 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.54□□□□□ -2.32
PTP4A1Q93096 MIR548AO-201ENST00000579992 96 ntBASIC0.54□□□□□ -2.32
PTP4A1Q93096 SNORD58B-201ENST00000607313 66 ntBASIC0.54□□□□□ -2.32
PTP4A1Q93096 AC006157.1-201ENST00000611750 366 ntBASIC0.54□□□□□ -2.32
PTP4A1Q93096 Y_RNA.5-201ENST00000362334 102 ntBASIC0.53□□□□□ -2.32
PTP4A1Q93096 RNU6-1205P-201ENST00000363625 106 ntBASIC0.53□□□□□ -2.32
PTP4A1Q93096 RNU6-1237P-201ENST00000384777 107 ntBASIC0.53□□□□□ -2.32
PTP4A1Q93096 RNU4-57P-201ENST00000515980 135 ntBASIC0.53□□□□□ -2.32
PTP4A1Q93096 RNU6-977P-201ENST00000516411 103 ntBASIC0.53□□□□□ -2.32
PTP4A1Q93096 RNU6-875P-201ENST00000516488 106 ntBASIC0.53□□□□□ -2.32
PTP4A1Q93096 AP003484.1-201ENST00000530974 250 ntBASIC0.53□□□□□ -2.32
PTP4A1Q93096 AC004812.1-201ENST00000540773 146 ntBASIC0.53□□□□□ -2.32
PTP4A1Q93096 AL355297.3-201ENST00000604082 446 ntBASIC0.53□□□□□ -2.32
PTP4A1Q93096 Y_RNA.14-201ENST00000362415 103 ntBASIC0.52□□□□□ -2.33
PTP4A1Q93096 RNU6-801P-201ENST00000364087 105 ntBASIC0.52□□□□□ -2.33
PTP4A1Q93096 SNORA63C-201ENST00000364578 129 ntBASIC0.52□□□□□ -2.33
PTP4A1Q93096 Y_RNA.315-201ENST00000365117 102 ntBASIC0.52□□□□□ -2.33
PTP4A1Q93096 RNU6-580P-201ENST00000365159 107 ntBASIC0.52□□□□□ -2.33
PTP4A1Q93096 SNORA63.7-201ENST00000365579 123 ntBASIC0.52□□□□□ -2.33
PTP4A1Q93096 MIR92A1-201ENST00000385233 78 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms