Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RNU6-125P-201ENST00000384505 107 ntBASIC1.96□□□□□ -2.1
ATG4AQ8WYN0 SNORA26-201ENST00000391286 122 ntBASIC1.96□□□□□ -2.1
ATG4AQ8WYN0 AL034345.1-201ENST00000407768 123 ntBASIC1.96□□□□□ -2.1
ATG4AQ8WYN0 RNU2-70P-201ENST00000410718 179 ntBASIC1.96□□□□□ -2.1
ATG4AQ8WYN0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.96□□□□□ -2.1
ATG4AQ8WYN0 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
ATG4AQ8WYN0 RNU6-774P-201ENST00000363238 107 ntBASIC1.95□□□□□ -2.1
ATG4AQ8WYN0 Y_RNA.634-201ENST00000364811 113 ntBASIC1.95□□□□□ -2.1
ATG4AQ8WYN0 SNORD72-201ENST00000390994 80 ntBASIC1.95□□□□□ -2.1
ATG4AQ8WYN0 MIR3133-201ENST00000583157 78 ntBASIC1.95□□□□□ -2.1
ATG4AQ8WYN0 DNAJC19P2-201ENST00000593340 302 ntBASIC1.95□□□□□ -2.1
ATG4AQ8WYN0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.95□□□□□ -2.1
ATG4AQ8WYN0 uc_338.20-201ENST00000621563 178 ntBASIC1.95□□□□□ -2.1
ATG4AQ8WYN0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
ATG4AQ8WYN0 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
ATG4AQ8WYN0 Y_RNA.91-201ENST00000363042 107 ntBASIC1.94□□□□□ -2.1
ATG4AQ8WYN0 SNORD50B-201ENST00000364995 70 ntBASIC1.94□□□□□ -2.1
ATG4AQ8WYN0 Y_RNA.486-201ENST00000384398 107 ntBASIC1.94□□□□□ -2.1
ATG4AQ8WYN0 RNU6-1031P-201ENST00000384773 107 ntBASIC1.94□□□□□ -2.1
ATG4AQ8WYN0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.94□□□□□ -2.1
ATG4AQ8WYN0 snoU13.27-201ENST00000459278 104 ntBASIC1.94□□□□□ -2.1
ATG4AQ8WYN0 MIR4709-201ENST00000577272 72 ntBASIC1.94□□□□□ -2.1
ATG4AQ8WYN0 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.94□□□□□ -2.1
ATG4AQ8WYN0 MIR378D2-201ENST00000580636 98 ntBASIC1.94□□□□□ -2.1
ATG4AQ8WYN0 Y_RNA.778-201ENST00000620203 90 ntBASIC1.94□□□□□ -2.1
ATG4AQ8WYN0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
ATG4AQ8WYN0 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
ATG4AQ8WYN0 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.93□□□□□ -2.1
ATG4AQ8WYN0 AC131280.1-202ENST00000624067 4211 ntBASIC1.93□□□□□ -2.1
ATG4AQ8WYN0 ZNF702P-202ENST00000434269 1966 ntBASIC1.93□□□□□ -2.1
ATG4AQ8WYN0 RNU6-1084P-201ENST00000362498 107 ntBASIC1.93□□□□□ -2.1
ATG4AQ8WYN0 SNORA16.1-201ENST00000364597 132 ntBASIC1.93□□□□□ -2.1
ATG4AQ8WYN0 SNORA16B-201ENST00000364674 135 ntBASIC1.93□□□□□ -2.1
ATG4AQ8WYN0 snoU2-30.1-201ENST00000365012 70 ntBASIC1.93□□□□□ -2.1
ATG4AQ8WYN0 Y_RNA.393-201ENST00000383936 102 ntBASIC1.93□□□□□ -2.1
ATG4AQ8WYN0 HMGN2P19-201ENST00000425149 265 ntBASIC1.93□□□□□ -2.1
ATG4AQ8WYN0 AC003989.2-201ENST00000440224 169 ntBASIC1.93□□□□□ -2.1
ATG4AQ8WYN0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.93□□□□□ -2.1
ATG4AQ8WYN0 RNU7-34P-201ENST00000459394 64 ntBASIC1.93□□□□□ -2.1
ATG4AQ8WYN0 RPS27P21-201ENST00000486977 252 ntBASIC1.93□□□□□ -2.1
ATG4AQ8WYN0 SNORA31.17-201ENST00000516953 127 ntBASIC1.93□□□□□ -2.1
ATG4AQ8WYN0 RNU6-365P-201ENST00000517113 106 ntBASIC1.93□□□□□ -2.1
ATG4AQ8WYN0 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.93□□□□□ -2.1
ATG4AQ8WYN0 MIR4648-201ENST00000580107 72 ntBASIC1.93□□□□□ -2.1
ATG4AQ8WYN0 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
ATG4AQ8WYN0 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.92□□□□□ -2.1
ATG4AQ8WYN0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.92□□□□□ -2.1
ATG4AQ8WYN0 MIRLET7C-201ENST00000362160 84 ntBASIC1.92□□□□□ -2.1
ATG4AQ8WYN0 RNA5SP276-201ENST00000362580 94 ntBASIC1.92□□□□□ -2.1
ATG4AQ8WYN0 SNORD14E-201ENST00000364009 85 ntBASIC1.92□□□□□ -2.1
ATG4AQ8WYN0 RNU6-151P-201ENST00000364158 107 ntBASIC1.92□□□□□ -2.1
ATG4AQ8WYN0 Y_RNA.400-201ENST00000383963 111 ntBASIC1.92□□□□□ -2.1
ATG4AQ8WYN0 Y_RNA.521-201ENST00000384560 114 ntBASIC1.92□□□□□ -2.1
ATG4AQ8WYN0 RNU6-768P-201ENST00000384683 107 ntBASIC1.92□□□□□ -2.1
ATG4AQ8WYN0 MIR802-201ENST00000390235 94 ntBASIC1.92□□□□□ -2.1
ATG4AQ8WYN0 RPL30P13-201ENST00000418873 348 ntBASIC1.92□□□□□ -2.1
ATG4AQ8WYN0 snoU13.26-201ENST00000459452 105 ntBASIC1.92□□□□□ -2.1
ATG4AQ8WYN0 CYCTP-201ENST00000504253 315 ntBASIC1.92□□□□□ -2.1
ATG4AQ8WYN0 SNORD45.4-201ENST00000516629 73 ntBASIC1.92□□□□□ -2.1
ATG4AQ8WYN0 MIR514B-201ENST00000516774 80 ntBASIC1.92□□□□□ -2.1
ATG4AQ8WYN0 AC120024.3-201ENST00000603167 156 ntBASIC1.92□□□□□ -2.1
ATG4AQ8WYN0 MIR3658-201ENST00000636291 56 ntBASIC1.92□□□□□ -2.1
ATG4AQ8WYN0 AC008555.8-201ENST00000623602 2168 ntBASIC1.91□□□□□ -2.1
ATG4AQ8WYN0 Y_RNA.66-201ENST00000362862 102 ntBASIC1.91□□□□□ -2.1
ATG4AQ8WYN0 RNU6-978P-201ENST00000364371 103 ntBASIC1.91□□□□□ -2.1
ATG4AQ8WYN0 Y_RNA.336-201ENST00000365307 109 ntBASIC1.91□□□□□ -2.1
ATG4AQ8WYN0 RNU6-597P-201ENST00000365620 102 ntBASIC1.91□□□□□ -2.1
ATG4AQ8WYN0 RNU6-442P-201ENST00000383968 104 ntBASIC1.91□□□□□ -2.1
ATG4AQ8WYN0 RNU6-424P-201ENST00000384367 105 ntBASIC1.91□□□□□ -2.1
ATG4AQ8WYN0 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.91□□□□□ -2.1
ATG4AQ8WYN0 CALM2P4-201ENST00000430810 426 ntBASIC1.91□□□□□ -2.1
ATG4AQ8WYN0 HMGN2P32-201ENST00000444648 269 ntBASIC1.91□□□□□ -2.1
ATG4AQ8WYN0 SNORD116-25-201ENST00000516517 92 ntBASIC1.91□□□□□ -2.1
ATG4AQ8WYN0 MIR3646-201ENST00000578301 84 ntBASIC1.91□□□□□ -2.1
ATG4AQ8WYN0 AC021506.2-201ENST00000612354 169 ntBASIC1.91□□□□□ -2.1
ATG4AQ8WYN0 AC027279.3-201ENST00000625055 122 ntBASIC1.91□□□□□ -2.1
ATG4AQ8WYN0 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.91□□□□□ -2.1
ATG4AQ8WYN0 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
ATG4AQ8WYN0 RNU6-187P-201ENST00000384139 106 ntBASIC1.9□□□□□ -2.11
ATG4AQ8WYN0 U8.16-201ENST00000391279 133 ntBASIC1.9□□□□□ -2.11
ATG4AQ8WYN0 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.9□□□□□ -2.11
ATG4AQ8WYN0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
ATG4AQ8WYN0 RNA5SP57-201ENST00000459463 123 ntBASIC1.9□□□□□ -2.11
ATG4AQ8WYN0 UBL5P3-201ENST00000475112 231 ntBASIC1.9□□□□□ -2.11
ATG4AQ8WYN0 RPS29P11-201ENST00000496507 171 ntBASIC1.9□□□□□ -2.11
ATG4AQ8WYN0 AC114811.1-201ENST00000507207 168 ntBASIC1.9□□□□□ -2.11
ATG4AQ8WYN0 RNU6-346P-201ENST00000516288 111 ntBASIC1.9□□□□□ -2.11
ATG4AQ8WYN0 RNU6-504P-201ENST00000516568 104 ntBASIC1.9□□□□□ -2.11
ATG4AQ8WYN0 RNA5SP168-201ENST00000516642 112 ntBASIC1.9□□□□□ -2.11
ATG4AQ8WYN0 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.9□□□□□ -2.11
ATG4AQ8WYN0 MIR4419B-201ENST00000577260 68 ntBASIC1.9□□□□□ -2.11
ATG4AQ8WYN0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.9□□□□□ -2.11
ATG4AQ8WYN0 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.9□□□□□ -2.11
ATG4AQ8WYN0 Y_RNA.215-201ENST00000364204 112 ntBASIC1.89□□□□□ -2.11
ATG4AQ8WYN0 SNORD24-201ENST00000383884 75 ntBASIC1.89□□□□□ -2.11
ATG4AQ8WYN0 RNU6-163P-201ENST00000384396 106 ntBASIC1.89□□□□□ -2.11
ATG4AQ8WYN0 RNU6-360P-201ENST00000390944 104 ntBASIC1.89□□□□□ -2.11
ATG4AQ8WYN0 RNA5SP212-201ENST00000391223 107 ntBASIC1.89□□□□□ -2.11
ATG4AQ8WYN0 SNRPGP14-201ENST00000435400 219 ntBASIC1.89□□□□□ -2.11
ATG4AQ8WYN0 AL392103.1-201ENST00000447000 198 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms