Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC008133.2-201ENST00000624540 351 ntBASIC0.54□□□□□ -2.32
RTN4IP1Q8WWV3 MIR6516-201ENST00000630554 81 ntBASIC0.54□□□□□ -2.32
RTN4IP1Q8WWV3 MTND4P29-201ENST00000503122 1372 ntBASIC0.54□□□□□ -2.32
RTN4IP1Q8WWV3 Y_RNA.112-201ENST00000363250 102 ntBASIC0.53□□□□□ -2.32
RTN4IP1Q8WWV3 SNORD113-8-201ENST00000363497 74 ntBASIC0.53□□□□□ -2.32
RTN4IP1Q8WWV3 SNORD42.2-201ENST00000365570 69 ntBASIC0.53□□□□□ -2.32
RTN4IP1Q8WWV3 MIR508-201ENST00000384857 115 ntBASIC0.53□□□□□ -2.32
RTN4IP1Q8WWV3 MTCO2P33-201ENST00000402100 465 ntBASIC0.53□□□□□ -2.32
RTN4IP1Q8WWV3 MIR1302-11-201ENST00000408051 138 ntBASIC0.53□□□□□ -2.32
RTN4IP1Q8WWV3 MIR1302-9-201ENST00000408365 138 ntBASIC0.53□□□□□ -2.32
RTN4IP1Q8WWV3 MIR1302-10-201ENST00000408734 138 ntBASIC0.53□□□□□ -2.32
RTN4IP1Q8WWV3 Y_RNA.602-201ENST00000410535 92 ntBASIC0.53□□□□□ -2.32
RTN4IP1Q8WWV3 RPS26P5-201ENST00000418544 335 ntBASIC0.53□□□□□ -2.32
RTN4IP1Q8WWV3 PMCHL1-202ENST00000423102 261 ntBASIC0.53□□□□□ -2.32
RTN4IP1Q8WWV3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.53□□□□□ -2.32
RTN4IP1Q8WWV3 POLR2KP2-201ENST00000438155 177 ntBASIC0.53□□□□□ -2.32
RTN4IP1Q8WWV3 HMGN2P32-201ENST00000444648 269 ntBASIC0.53□□□□□ -2.32
RTN4IP1Q8WWV3 AL392103.1-201ENST00000447000 198 ntBASIC0.53□□□□□ -2.32
RTN4IP1Q8WWV3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.53□□□□□ -2.32
RTN4IP1Q8WWV3 HSPE1P25-201ENST00000455484 251 ntBASIC0.53□□□□□ -2.32
RTN4IP1Q8WWV3 RNU6-437P-201ENST00000459408 95 ntBASIC0.53□□□□□ -2.32
RTN4IP1Q8WWV3 RPS29P1-201ENST00000465274 159 ntBASIC0.53□□□□□ -2.32
RTN4IP1Q8WWV3 RNU7-181P-201ENST00000517234 74 ntBASIC0.53□□□□□ -2.32
RTN4IP1Q8WWV3 DEFB108E-201ENST00000524692 240 ntBASIC0.53□□□□□ -2.32
RTN4IP1Q8WWV3 AC133485.1-201ENST00000567176 124 ntBASIC0.53□□□□□ -2.32
RTN4IP1Q8WWV3 AC138907.6-201ENST00000568401 126 ntBASIC0.53□□□□□ -2.32
RTN4IP1Q8WWV3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.53□□□□□ -2.32
RTN4IP1Q8WWV3 MIR4452-201ENST00000583004 71 ntBASIC0.53□□□□□ -2.32
RTN4IP1Q8WWV3 AC008507.4-201ENST00000585464 127 ntBASIC0.53□□□□□ -2.32
RTN4IP1Q8WWV3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.53□□□□□ -2.32
RTN4IP1Q8WWV3 RAC1P9-201ENST00000604990 392 ntBASIC0.53□□□□□ -2.32
RTN4IP1Q8WWV3 MIR1302-2-201ENST00000607096 138 ntBASIC0.53□□□□□ -2.32
RTN4IP1Q8WWV3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.53□□□□□ -2.32
RTN4IP1Q8WWV3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
RTN4IP1Q8WWV3 RNU4-50P-201ENST00000364361 141 ntBASIC0.52□□□□□ -2.33
RTN4IP1Q8WWV3 Y_RNA.395-201ENST00000383945 109 ntBASIC0.52□□□□□ -2.33
RTN4IP1Q8WWV3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
RTN4IP1Q8WWV3 SNORD89-201ENST00000390981 114 ntBASIC0.52□□□□□ -2.33
RTN4IP1Q8WWV3 RNU6-121P-201ENST00000410525 99 ntBASIC0.52□□□□□ -2.33
RTN4IP1Q8WWV3 U8.19-201ENST00000459095 133 ntBASIC0.52□□□□□ -2.33
RTN4IP1Q8WWV3 SNORD11-201ENST00000459124 84 ntBASIC0.52□□□□□ -2.33
RTN4IP1Q8WWV3 MRPS35P2-201ENST00000508242 191 ntBASIC0.52□□□□□ -2.33
RTN4IP1Q8WWV3 RNU6-191P-201ENST00000516295 94 ntBASIC0.52□□□□□ -2.33
RTN4IP1Q8WWV3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.52□□□□□ -2.33
RTN4IP1Q8WWV3 AC104695.3-201ENST00000604052 296 ntBASIC0.52□□□□□ -2.33
RTN4IP1Q8WWV3 LARP7P1-201ENST00000605576 316 ntBASIC0.52□□□□□ -2.33
RTN4IP1Q8WWV3 JPX_2.1-201ENST00000614161 69 ntBASIC0.52□□□□□ -2.33
RTN4IP1Q8WWV3 AL138825.1-201ENST00000618587 192 ntBASIC0.52□□□□□ -2.33
RTN4IP1Q8WWV3 MIR4251-201ENST00000635819 61 ntBASIC0.52□□□□□ -2.33
RTN4IP1Q8WWV3 RNA5SP48-201ENST00000363969 126 ntBASIC0.51□□□□□ -2.33
RTN4IP1Q8WWV3 Y_RNA.222-201ENST00000364264 102 ntBASIC0.51□□□□□ -2.33
RTN4IP1Q8WWV3 RNU6-474P-201ENST00000384243 107 ntBASIC0.51□□□□□ -2.33
RTN4IP1Q8WWV3 Y_RNA.509-201ENST00000384506 99 ntBASIC0.51□□□□□ -2.33
RTN4IP1Q8WWV3 MIR92A1-201ENST00000385233 78 ntBASIC0.51□□□□□ -2.33
RTN4IP1Q8WWV3 RNU6-763P-201ENST00000390865 106 ntBASIC0.51□□□□□ -2.33
RTN4IP1Q8WWV3 RNU6-383P-201ENST00000410864 94 ntBASIC0.51□□□□□ -2.33
RTN4IP1Q8WWV3 MTATP6P23-201ENST00000440153 476 ntBASIC0.51□□□□□ -2.33
RTN4IP1Q8WWV3 AC098869.1-201ENST00000481627 292 ntBASIC0.51□□□□□ -2.33
RTN4IP1Q8WWV3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.51□□□□□ -2.33
RTN4IP1Q8WWV3 RNU6-764P-201ENST00000516396 105 ntBASIC0.51□□□□□ -2.33
RTN4IP1Q8WWV3 MIR548AO-201ENST00000579992 96 ntBASIC0.51□□□□□ -2.33
RTN4IP1Q8WWV3 AL353765.1-201ENST00000605514 183 ntBASIC0.51□□□□□ -2.33
RTN4IP1Q8WWV3 SNORD113-5-201ENST00000607261 78 ntBASIC0.51□□□□□ -2.33
RTN4IP1Q8WWV3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.51□□□□□ -2.33
RTN4IP1Q8WWV3 AC015726.2-201ENST00000620112 122 ntBASIC0.51□□□□□ -2.33
RTN4IP1Q8WWV3 7SK.10-201ENST00000621414 298 ntBASIC0.51□□□□□ -2.33
RTN4IP1Q8WWV3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
RTN4IP1Q8WWV3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.5□□□□□ -2.33
RTN4IP1Q8WWV3 Y_RNA.26-201ENST00000362539 101 ntBASIC0.5□□□□□ -2.33
RTN4IP1Q8WWV3 RNU6-442P-201ENST00000383968 104 ntBASIC0.5□□□□□ -2.33
RTN4IP1Q8WWV3 MIR499A-201ENST00000384903 122 ntBASIC0.5□□□□□ -2.33
RTN4IP1Q8WWV3 MIR15B-201ENST00000385045 98 ntBASIC0.5□□□□□ -2.33
RTN4IP1Q8WWV3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.5□□□□□ -2.33
RTN4IP1Q8WWV3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
RTN4IP1Q8WWV3 RNU6-823P-201ENST00000391042 103 ntBASIC0.5□□□□□ -2.33
RTN4IP1Q8WWV3 U8.17-201ENST00000391292 132 ntBASIC0.5□□□□□ -2.33
RTN4IP1Q8WWV3 AC024067.1-201ENST00000426199 223 ntBASIC0.5□□□□□ -2.33
RTN4IP1Q8WWV3 SEPT14P8-201ENST00000508026 178 ntBASIC0.5□□□□□ -2.33
RTN4IP1Q8WWV3 AL117351.2-201ENST00000513571 157 ntBASIC0.5□□□□□ -2.33
RTN4IP1Q8WWV3 RNU6-475P-201ENST00000516073 104 ntBASIC0.5□□□□□ -2.33
RTN4IP1Q8WWV3 RNU6-496P-201ENST00000516145 99 ntBASIC0.5□□□□□ -2.33
RTN4IP1Q8WWV3 Y_RNA.714-201ENST00000517065 90 ntBASIC0.5□□□□□ -2.33
RTN4IP1Q8WWV3 RNU6-897P-201ENST00000517135 105 ntBASIC0.5□□□□□ -2.33
RTN4IP1Q8WWV3 AC004812.1-201ENST00000540773 146 ntBASIC0.5□□□□□ -2.33
RTN4IP1Q8WWV3 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.5□□□□□ -2.33
RTN4IP1Q8WWV3 AC124312.5-201ENST00000604451 268 ntBASIC0.5□□□□□ -2.33
RTN4IP1Q8WWV3 Pinc.1-201ENST00000616452 154 ntBASIC0.5□□□□□ -2.33
RTN4IP1Q8WWV3 MIR376A1-201ENST00000616574 68 ntBASIC0.5□□□□□ -2.33
RTN4IP1Q8WWV3 uc_338.17-201ENST00000619633 179 ntBASIC0.5□□□□□ -2.33
RTN4IP1Q8WWV3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
RTN4IP1Q8WWV3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.49□□□□□ -2.33
RTN4IP1Q8WWV3 RNU6-806P-201ENST00000365147 105 ntBASIC0.49□□□□□ -2.33
RTN4IP1Q8WWV3 SNORD38C-201ENST00000384381 69 ntBASIC0.49□□□□□ -2.33
RTN4IP1Q8WWV3 Y_RNA.494-201ENST00000384432 111 ntBASIC0.49□□□□□ -2.33
RTN4IP1Q8WWV3 MIR215-201ENST00000384858 110 ntBASIC0.49□□□□□ -2.33
RTN4IP1Q8WWV3 SNORD99-201ENST00000408612 74 ntBASIC0.49□□□□□ -2.33
RTN4IP1Q8WWV3 RNU6-733P-201ENST00000410759 104 ntBASIC0.49□□□□□ -2.33
RTN4IP1Q8WWV3 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.49□□□□□ -2.33
RTN4IP1Q8WWV3 MTCO1P5-201ENST00000433573 344 ntBASIC0.49□□□□□ -2.33
RTN4IP1Q8WWV3 Y_RNA.639-201ENST00000458981 102 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms