Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 AC040896.1-201ENST00000613819 479 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 MIR6866-201ENST00000638146 69 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 RNA5SP347-201ENST00000362445 119 ntBASIC0.69□□□□□ -2.3
SHROOM3Q8TF72 Y_RNA.230-201ENST00000364348 109 ntBASIC0.69□□□□□ -2.3
SHROOM3Q8TF72 RNU6-442P-201ENST00000383968 104 ntBASIC0.69□□□□□ -2.3
SHROOM3Q8TF72 RNU6-21P-201ENST00000384710 107 ntBASIC0.69□□□□□ -2.3
SHROOM3Q8TF72 MT-TT-201ENST00000387460 66 ntBASIC0.69□□□□□ -2.3
SHROOM3Q8TF72 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.69□□□□□ -2.3
SHROOM3Q8TF72 SNX2P2-201ENST00000424553 323 ntBASIC0.69□□□□□ -2.3
SHROOM3Q8TF72 DYNLT3P2-201ENST00000442517 295 ntBASIC0.69□□□□□ -2.3
SHROOM3Q8TF72 RPL39P38-201ENST00000467018 153 ntBASIC0.69□□□□□ -2.3
SHROOM3Q8TF72 RPL30P7-201ENST00000479312 323 ntBASIC0.69□□□□□ -2.3
SHROOM3Q8TF72 Y_RNA.701-201ENST00000516812 110 ntBASIC0.69□□□□□ -2.3
SHROOM3Q8TF72 RNU6-897P-201ENST00000517135 105 ntBASIC0.69□□□□□ -2.3
SHROOM3Q8TF72 AC090049.2-201ENST00000550377 109 ntBASIC0.69□□□□□ -2.3
SHROOM3Q8TF72 AL513534.2-201ENST00000603836 250 ntBASIC0.69□□□□□ -2.3
SHROOM3Q8TF72 AP003357.1-201ENST00000604497 148 ntBASIC0.69□□□□□ -2.3
SHROOM3Q8TF72 Y_RNA.772-201ENST00000606692 102 ntBASIC0.69□□□□□ -2.3
SHROOM3Q8TF72 AC243829.3-201ENST00000622177 108 ntBASIC0.69□□□□□ -2.3
SHROOM3Q8TF72 AC027279.3-201ENST00000625055 122 ntBASIC0.69□□□□□ -2.3
SHROOM3Q8TF72 SNORA72.4-201ENST00000384174 132 ntBASIC0.68□□□□□ -2.3
SHROOM3Q8TF72 RNU6-937P-201ENST00000384325 106 ntBASIC0.68□□□□□ -2.3
SHROOM3Q8TF72 RNU6-163P-201ENST00000384396 106 ntBASIC0.68□□□□□ -2.3
SHROOM3Q8TF72 MIR516B2-201ENST00000385190 85 ntBASIC0.68□□□□□ -2.3
SHROOM3Q8TF72 Y_RNA.581-201ENST00000391017 97 ntBASIC0.68□□□□□ -2.3
SHROOM3Q8TF72 MIR1185-1-201ENST00000408598 86 ntBASIC0.68□□□□□ -2.3
SHROOM3Q8TF72 MTCO1P5-201ENST00000433573 344 ntBASIC0.68□□□□□ -2.3
SHROOM3Q8TF72 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.68□□□□□ -2.3
SHROOM3Q8TF72 AC024405.2-202ENST00000532731 184 ntBASIC0.68□□□□□ -2.3
SHROOM3Q8TF72 AC136932.1-201ENST00000574771 208 ntBASIC0.68□□□□□ -2.3
SHROOM3Q8TF72 MIR4762-201ENST00000585261 75 ntBASIC0.68□□□□□ -2.3
SHROOM3Q8TF72 RAC1P9-201ENST00000604990 392 ntBASIC0.68□□□□□ -2.3
SHROOM3Q8TF72 Pinc.1-201ENST00000616452 154 ntBASIC0.68□□□□□ -2.3
SHROOM3Q8TF72 MIR6759-201ENST00000638110 65 ntBASIC0.68□□□□□ -2.3
SHROOM3Q8TF72 MIR26B-201ENST00000362251 77 ntBASIC0.68□□□□□ -2.3
SHROOM3Q8TF72 SNORD81.1-201ENST00000363064 77 ntBASIC0.68□□□□□ -2.3
SHROOM3Q8TF72 AL590004.1-201ENST00000405321 300 ntBASIC0.68□□□□□ -2.3
SHROOM3Q8TF72 AL034345.1-201ENST00000407768 123 ntBASIC0.68□□□□□ -2.3
SHROOM3Q8TF72 RNU6-733P-201ENST00000410759 104 ntBASIC0.68□□□□□ -2.3
SHROOM3Q8TF72 RNU2-14P-201ENST00000411053 191 ntBASIC0.68□□□□□ -2.3
SHROOM3Q8TF72 RNU6-475P-201ENST00000516073 104 ntBASIC0.68□□□□□ -2.3
SHROOM3Q8TF72 Y_RNA.714-201ENST00000517065 90 ntBASIC0.68□□□□□ -2.3
SHROOM3Q8TF72 RNU6-1137P-201ENST00000517073 99 ntBASIC0.68□□□□□ -2.3
SHROOM3Q8TF72 AC109810.1-201ENST00000534066 224 ntBASIC0.68□□□□□ -2.3
SHROOM3Q8TF72 MIR4680-201ENST00000580906 66 ntBASIC0.68□□□□□ -2.3
SHROOM3Q8TF72 MIR4300-201ENST00000581016 96 ntBASIC0.68□□□□□ -2.3
SHROOM3Q8TF72 AC013791.1-201ENST00000616619 62 ntBASIC0.68□□□□□ -2.3
SHROOM3Q8TF72 AC027335.2-201ENST00000624030 375 ntBASIC0.68□□□□□ -2.3
SHROOM3Q8TF72 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
SHROOM3Q8TF72 Y_RNA.152-201ENST00000363578 100 ntBASIC0.67□□□□□ -2.3
SHROOM3Q8TF72 RNU6-1187P-201ENST00000364771 110 ntBASIC0.67□□□□□ -2.3
SHROOM3Q8TF72 SNORA33.2-201ENST00000365413 134 ntBASIC0.67□□□□□ -2.3
SHROOM3Q8TF72 Y_RNA.395-201ENST00000383945 109 ntBASIC0.67□□□□□ -2.3
SHROOM3Q8TF72 SNORD63-201ENST00000384262 68 ntBASIC0.67□□□□□ -2.3
SHROOM3Q8TF72 AC027119.1-201ENST00000440877 241 ntBASIC0.67□□□□□ -2.3
SHROOM3Q8TF72 MTND4LP30-201ENST00000454092 297 ntBASIC0.67□□□□□ -2.3
SHROOM3Q8TF72 SNORD116-28-201ENST00000516123 91 ntBASIC0.67□□□□□ -2.3
SHROOM3Q8TF72 RNU7-115P-201ENST00000516433 55 ntBASIC0.67□□□□□ -2.3
SHROOM3Q8TF72 RNU7-149P-201ENST00000516739 59 ntBASIC0.67□□□□□ -2.3
SHROOM3Q8TF72 RNU6-1096P-201ENST00000517089 102 ntBASIC0.67□□□□□ -2.3
SHROOM3Q8TF72 RNU6-902P-201ENST00000517212 91 ntBASIC0.67□□□□□ -2.3
SHROOM3Q8TF72 AL442663.2-201ENST00000554385 511 ntBASIC0.67□□□□□ -2.3
SHROOM3Q8TF72 MIR5692C2-201ENST00000577959 77 ntBASIC0.67□□□□□ -2.3
SHROOM3Q8TF72 Y_RNA.148-201ENST00000363557 117 ntBASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 RNU1-124P-201ENST00000363861 145 ntBASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 Y_RNA.462-201ENST00000384268 102 ntBASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 SNORA25-201ENST00000384384 134 ntBASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 MIR1302-11-201ENST00000408051 138 ntBASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 MIR1302-9-201ENST00000408365 138 ntBASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 MIR1302-10-201ENST00000408734 138 ntBASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 AL731563.1-201ENST00000442202 214 ntBASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 SNORA31.2-201ENST00000516019 134 ntBASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 SNORA18.7-201ENST00000516910 131 ntBASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 RNU6-1116P-201ENST00000517269 99 ntBASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 AC131281.1-201ENST00000522984 164 ntBASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 AP003733.2-201ENST00000529409 171 ntBASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 AC127455.1-201ENST00000565496 145 ntBASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 MIR4764-201ENST00000580680 88 ntBASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 AC124312.5-201ENST00000604451 268 ntBASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 MIR1302-2-201ENST00000607096 138 ntBASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 Y_RNA.28-201ENST00000362554 111 ntBASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 SNORD113-8-201ENST00000363497 74 ntBASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 Y_RNA.153-201ENST00000363615 91 ntBASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 RNU4-76P-201ENST00000364509 141 ntBASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 Y_RNA.336-201ENST00000365307 109 ntBASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 RNU6-1160P-201ENST00000384546 104 ntBASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 RNU6-939P-201ENST00000384634 107 ntBASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 RNA5SP63-201ENST00000391225 112 ntBASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 SNORA36B-201ENST00000410438 131 ntBASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 SERF1AP1-201ENST00000514575 187 ntBASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 RNU6-496P-201ENST00000516145 99 ntBASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 SNORA31.10-201ENST00000516482 106 ntBASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 SNORA62.5-201ENST00000516634 120 ntBASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 RNA5SP404-201ENST00000517118 132 ntBASIC0.66□□□□□ -2.3
SHROOM3Q8TF72 snoU2_19.2-201ENST00000363024 80 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms