Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 SNORD116-4-201ENST00000384733 96 ntBASIC0.18□□□□□ -2.38
LMX1AQ8TE12 Y_RNA.570-201ENST00000384750 101 ntBASIC0.18□□□□□ -2.38
LMX1AQ8TE12 Y_RNA.599-201ENST00000410489 109 ntBASIC0.18□□□□□ -2.38
LMX1AQ8TE12 MTND1P2-201ENST00000430604 821 ntBASIC0.18□□□□□ -2.38
LMX1AQ8TE12 AC069439.1-201ENST00000494739 167 ntBASIC0.18□□□□□ -2.38
LMX1AQ8TE12 RNU7-115P-201ENST00000516433 55 ntBASIC0.18□□□□□ -2.38
LMX1AQ8TE12 RNU6-1213P-201ENST00000517075 94 ntBASIC0.18□□□□□ -2.38
LMX1AQ8TE12 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.18□□□□□ -2.38
LMX1AQ8TE12 MIR4659A-201ENST00000580269 81 ntBASIC0.18□□□□□ -2.38
LMX1AQ8TE12 MIR5093-201ENST00000583199 100 ntBASIC0.18□□□□□ -2.38
LMX1AQ8TE12 MIR5188-201ENST00000583467 113 ntBASIC0.18□□□□□ -2.38
LMX1AQ8TE12 AC008507.4-201ENST00000585464 127 ntBASIC0.18□□□□□ -2.38
LMX1AQ8TE12 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
LMX1AQ8TE12 POLR3GP1-201ENST00000594073 261 ntBASIC0.18□□□□□ -2.38
LMX1AQ8TE12 MIR4791-201ENST00000607666 84 ntBASIC0.18□□□□□ -2.38
LMX1AQ8TE12 TPTEP1-208ENST00000636884 213 ntBASIC0.18□□□□□ -2.38
LMX1AQ8TE12 RNU6-1209P-201ENST00000363655 107 ntBASIC0.17□□□□□ -2.38
LMX1AQ8TE12 RNU6-1188P-201ENST00000363795 107 ntBASIC0.17□□□□□ -2.38
LMX1AQ8TE12 RNU6-934P-201ENST00000365154 107 ntBASIC0.17□□□□□ -2.38
LMX1AQ8TE12 MIR570-201ENST00000384917 97 ntBASIC0.17□□□□□ -2.38
LMX1AQ8TE12 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.17□□□□□ -2.38
LMX1AQ8TE12 Y_RNA.646-201ENST00000410980 101 ntBASIC0.17□□□□□ -2.38
LMX1AQ8TE12 AL589823.1-201ENST00000429577 183 ntBASIC0.17□□□□□ -2.38
LMX1AQ8TE12 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.17□□□□□ -2.38
LMX1AQ8TE12 RNU7-56P-201ENST00000458744 62 ntBASIC0.17□□□□□ -2.38
LMX1AQ8TE12 PRDX4P1-201ENST00000507189 574 ntBASIC0.17□□□□□ -2.38
LMX1AQ8TE12 RNU7-30P-201ENST00000516835 62 ntBASIC0.17□□□□□ -2.38
LMX1AQ8TE12 RNU7-4P-201ENST00000516961 62 ntBASIC0.17□□□□□ -2.38
LMX1AQ8TE12 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.17□□□□□ -2.38
LMX1AQ8TE12 AC144568.1-201ENST00000520139 137 ntBASIC0.17□□□□□ -2.38
LMX1AQ8TE12 MIR4804-201ENST00000581683 73 ntBASIC0.17□□□□□ -2.38
LMX1AQ8TE12 AC012433.1-201ENST00000588916 398 ntBASIC0.17□□□□□ -2.38
LMX1AQ8TE12 LARP7P1-201ENST00000605576 316 ntBASIC0.17□□□□□ -2.38
LMX1AQ8TE12 uc_338.6-201ENST00000613544 171 ntBASIC0.17□□□□□ -2.38
LMX1AQ8TE12 MIR6718-201ENST00000616153 80 ntBASIC0.17□□□□□ -2.38
LMX1AQ8TE12 SNORD44.1-201ENST00000363202 61 ntBASIC0.16□□□□□ -2.38
LMX1AQ8TE12 Y_RNA.166-201ENST00000363730 102 ntBASIC0.16□□□□□ -2.38
LMX1AQ8TE12 U8.7-201ENST00000364940 136 ntBASIC0.16□□□□□ -2.38
LMX1AQ8TE12 Y_RNA.341-201ENST00000365341 102 ntBASIC0.16□□□□□ -2.38
LMX1AQ8TE12 SNORA51.10-201ENST00000384418 136 ntBASIC0.16□□□□□ -2.38
LMX1AQ8TE12 RNU6-125P-201ENST00000384505 107 ntBASIC0.16□□□□□ -2.38
LMX1AQ8TE12 MIR520H-201ENST00000385126 88 ntBASIC0.16□□□□□ -2.38
LMX1AQ8TE12 AL603910.2-201ENST00000407268 136 ntBASIC0.16□□□□□ -2.38
LMX1AQ8TE12 MIR1295A-201ENST00000408463 79 ntBASIC0.16□□□□□ -2.38
LMX1AQ8TE12 RNU6-855P-201ENST00000410395 104 ntBASIC0.16□□□□□ -2.38
LMX1AQ8TE12 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.16□□□□□ -2.38
LMX1AQ8TE12 RN7SKP295-201ENST00000517264 153 ntBASIC0.16□□□□□ -2.38
LMX1AQ8TE12 AC024405.2-202ENST00000532731 184 ntBASIC0.16□□□□□ -2.38
LMX1AQ8TE12 AC127455.1-201ENST00000565496 145 ntBASIC0.16□□□□□ -2.38
LMX1AQ8TE12 MIR4431-201ENST00000579990 94 ntBASIC0.16□□□□□ -2.38
LMX1AQ8TE12 MIR4264-201ENST00000583520 66 ntBASIC0.16□□□□□ -2.38
LMX1AQ8TE12 Y_RNA.27-201ENST00000362540 103 ntBASIC0.15□□□□□ -2.39
LMX1AQ8TE12 SNORD81.1-201ENST00000363064 77 ntBASIC0.15□□□□□ -2.39
LMX1AQ8TE12 RNU6-674P-201ENST00000363831 107 ntBASIC0.15□□□□□ -2.39
LMX1AQ8TE12 SNORA24-201ENST00000384096 131 ntBASIC0.15□□□□□ -2.39
LMX1AQ8TE12 RNU6-767P-201ENST00000384132 107 ntBASIC0.15□□□□□ -2.39
LMX1AQ8TE12 RNU6-1215P-201ENST00000384441 102 ntBASIC0.15□□□□□ -2.39
LMX1AQ8TE12 RNU6-310P-201ENST00000384655 107 ntBASIC0.15□□□□□ -2.39
LMX1AQ8TE12 MTATP6P26-201ENST00000445926 662 ntBASIC0.15□□□□□ -2.39
LMX1AQ8TE12 AC005042.3-201ENST00000453230 174 ntBASIC0.15□□□□□ -2.39
LMX1AQ8TE12 RNU6-470P-201ENST00000515954 104 ntBASIC0.15□□□□□ -2.39
LMX1AQ8TE12 RNU6-863P-201ENST00000515989 104 ntBASIC0.15□□□□□ -2.39
LMX1AQ8TE12 RNU6-264P-201ENST00000517134 104 ntBASIC0.15□□□□□ -2.39
LMX1AQ8TE12 RNU7-181P-201ENST00000517234 74 ntBASIC0.15□□□□□ -2.39
LMX1AQ8TE12 MIR3612-201ENST00000579753 87 ntBASIC0.15□□□□□ -2.39
LMX1AQ8TE12 AC011476.5-201ENST00000615594 130 ntBASIC0.15□□□□□ -2.39
LMX1AQ8TE12 AC010205.1-201ENST00000616668 449 ntBASIC0.15□□□□□ -2.39
LMX1AQ8TE12 AC078938.1-201ENST00000620993 318 ntBASIC0.15□□□□□ -2.39
LMX1AQ8TE12 AC098679.4-201ENST00000624241 654 ntBASIC0.15□□□□□ -2.39
LMX1AQ8TE12 RNU6-845P-201ENST00000362578 103 ntBASIC0.14□□□□□ -2.39
LMX1AQ8TE12 RNU4-50P-201ENST00000364361 141 ntBASIC0.14□□□□□ -2.39
LMX1AQ8TE12 Y_RNA.318-201ENST00000365131 97 ntBASIC0.14□□□□□ -2.39
LMX1AQ8TE12 SNORA1.2-201ENST00000365189 134 ntBASIC0.14□□□□□ -2.39
LMX1AQ8TE12 RNU6-1175P-201ENST00000365200 107 ntBASIC0.14□□□□□ -2.39
LMX1AQ8TE12 Y_RNA.462-201ENST00000384268 102 ntBASIC0.14□□□□□ -2.39
LMX1AQ8TE12 RNA5SP299-201ENST00000391203 116 ntBASIC0.14□□□□□ -2.39
LMX1AQ8TE12 MTCO2P33-201ENST00000402100 465 ntBASIC0.14□□□□□ -2.39
LMX1AQ8TE12 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.14□□□□□ -2.39
LMX1AQ8TE12 SNORD100-201ENST00000408573 76 ntBASIC0.14□□□□□ -2.39
LMX1AQ8TE12 RNU6-847P-201ENST00000411115 108 ntBASIC0.14□□□□□ -2.39
LMX1AQ8TE12 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.14□□□□□ -2.39
LMX1AQ8TE12 FGF7P6-202ENST00000451282 293 ntBASIC0.14□□□□□ -2.39
LMX1AQ8TE12 RNU6-718P-201ENST00000516166 105 ntBASIC0.14□□□□□ -2.39
LMX1AQ8TE12 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.14□□□□□ -2.39
LMX1AQ8TE12 RNU6-977P-201ENST00000516411 103 ntBASIC0.14□□□□□ -2.39
LMX1AQ8TE12 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.14□□□□□ -2.39
LMX1AQ8TE12 uc_338.4-201ENST00000616635 176 ntBASIC0.14□□□□□ -2.39
LMX1AQ8TE12 U6.92-201ENST00000636464 89 ntBASIC0.14□□□□□ -2.39
LMX1AQ8TE12 Y_RNA.6-201ENST00000362350 114 ntBASIC0.13□□□□□ -2.39
LMX1AQ8TE12 RNU6-349P-201ENST00000362402 107 ntBASIC0.13□□□□□ -2.39
LMX1AQ8TE12 Y_RNA.279-201ENST00000364763 95 ntBASIC0.13□□□□□ -2.39
LMX1AQ8TE12 RNU6-890P-201ENST00000384121 107 ntBASIC0.13□□□□□ -2.39
LMX1AQ8TE12 RNU6-708P-201ENST00000384217 107 ntBASIC0.13□□□□□ -2.39
LMX1AQ8TE12 MIR520F-201ENST00000384824 87 ntBASIC0.13□□□□□ -2.39
LMX1AQ8TE12 AL590004.1-201ENST00000405321 300 ntBASIC0.13□□□□□ -2.39
LMX1AQ8TE12 SNORD83.1-201ENST00000411362 77 ntBASIC0.13□□□□□ -2.39
LMX1AQ8TE12 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.13□□□□□ -2.39
LMX1AQ8TE12 AC090844.1-201ENST00000422019 156 ntBASIC0.13□□□□□ -2.39
LMX1AQ8TE12 BTF3P11-201ENST00000426582 477 ntBASIC0.13□□□□□ -2.39
LMX1AQ8TE12 RNU4-77P-201ENST00000516692 156 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms