Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.19□□□□□ -2.44
CCDC112Q8NEF3 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.19□□□□□ -2.44
CCDC112Q8NEF3 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.19□□□□□ -2.44
CCDC112Q8NEF3 RNA5SP117-201ENST00000365294 118 ntBASIC-0.19□□□□□ -2.44
CCDC112Q8NEF3 SNORA24-201ENST00000384096 131 ntBASIC-0.19□□□□□ -2.44
CCDC112Q8NEF3 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.19□□□□□ -2.44
CCDC112Q8NEF3 Y_RNA.594-201ENST00000410373 140 ntBASIC-0.19□□□□□ -2.44
CCDC112Q8NEF3 PDCL2P1-201ENST00000419302 352 ntBASIC-0.19□□□□□ -2.44
CCDC112Q8NEF3 RNU7-185P-201ENST00000459215 60 ntBASIC-0.19□□□□□ -2.44
CCDC112Q8NEF3 snoU13.16-201ENST00000459350 104 ntBASIC-0.19□□□□□ -2.44
CCDC112Q8NEF3 MTND5P5-201ENST00000503764 376 ntBASIC-0.19□□□□□ -2.44
CCDC112Q8NEF3 RNU7-156P-201ENST00000517214 74 ntBASIC-0.19□□□□□ -2.44
CCDC112Q8NEF3 POLR3GP1-201ENST00000594073 261 ntBASIC-0.19□□□□□ -2.44
CCDC112Q8NEF3 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.19□□□□□ -2.44
CCDC112Q8NEF3 AC090517.2-201ENST00000614966 680 ntBASIC-0.19□□□□□ -2.44
CCDC112Q8NEF3 AC098679.4-201ENST00000624241 654 ntBASIC-0.19□□□□□ -2.44
CCDC112Q8NEF3 Y_RNA.2-201ENST00000362330 96 ntBASIC-0.2□□□□□ -2.44
CCDC112Q8NEF3 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.2□□□□□ -2.44
CCDC112Q8NEF3 SNORA63C-201ENST00000364578 129 ntBASIC-0.2□□□□□ -2.44
CCDC112Q8NEF3 RNU6-1013P-201ENST00000384180 107 ntBASIC-0.2□□□□□ -2.44
CCDC112Q8NEF3 Y_RNA.458-201ENST00000384240 102 ntBASIC-0.2□□□□□ -2.44
CCDC112Q8NEF3 PCNPP3-201ENST00000393579 471 ntBASIC-0.2□□□□□ -2.44
CCDC112Q8NEF3 AL603910.2-201ENST00000407268 136 ntBASIC-0.2□□□□□ -2.44
CCDC112Q8NEF3 RNU6-373P-201ENST00000411247 98 ntBASIC-0.2□□□□□ -2.44
CCDC112Q8NEF3 AC069271.1-201ENST00000445577 156 ntBASIC-0.2□□□□□ -2.44
CCDC112Q8NEF3 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.2□□□□□ -2.44
CCDC112Q8NEF3 RNU7-116P-201ENST00000516940 62 ntBASIC-0.2□□□□□ -2.44
CCDC112Q8NEF3 RNU6-448P-201ENST00000517052 107 ntBASIC-0.2□□□□□ -2.44
CCDC112Q8NEF3 IGLVI-20-201ENST00000519296 130 ntBASIC-0.2□□□□□ -2.44
CCDC112Q8NEF3 AC141557.1-201ENST00000540982 400 ntBASIC-0.2□□□□□ -2.44
CCDC112Q8NEF3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.2□□□□□ -2.44
CCDC112Q8NEF3 JPX_2.1-201ENST00000614161 69 ntBASIC-0.2□□□□□ -2.44
CCDC112Q8NEF3 AC078883.4-201ENST00000623218 367 ntBASIC-0.2□□□□□ -2.44
CCDC112Q8NEF3 MIR3974-201ENST00000637126 96 ntBASIC-0.2□□□□□ -2.44
CCDC112Q8NEF3 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.21□□□□□ -2.44
CCDC112Q8NEF3 SNORA72.1-201ENST00000363485 129 ntBASIC-0.21□□□□□ -2.44
CCDC112Q8NEF3 Y_RNA.310-201ENST00000365063 113 ntBASIC-0.21□□□□□ -2.44
CCDC112Q8NEF3 RNU6-1050P-201ENST00000410388 107 ntBASIC-0.21□□□□□ -2.44
CCDC112Q8NEF3 AC005042.3-201ENST00000453230 174 ntBASIC-0.21□□□□□ -2.44
CCDC112Q8NEF3 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.21□□□□□ -2.44
CCDC112Q8NEF3 RNU6-155P-201ENST00000516347 100 ntBASIC-0.21□□□□□ -2.44
CCDC112Q8NEF3 MIR4790-201ENST00000577799 79 ntBASIC-0.21□□□□□ -2.44
CCDC112Q8NEF3 MIR5589-201ENST00000579442 60 ntBASIC-0.21□□□□□ -2.44
CCDC112Q8NEF3 MIR5188-201ENST00000583467 113 ntBASIC-0.21□□□□□ -2.44
CCDC112Q8NEF3 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.21□□□□□ -2.44
CCDC112Q8NEF3 RNU6-1090P-201ENST00000364065 94 ntBASIC-0.22□□□□□ -2.44
CCDC112Q8NEF3 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.22□□□□□ -2.44
CCDC112Q8NEF3 RNU6-926P-201ENST00000384075 107 ntBASIC-0.22□□□□□ -2.44
CCDC112Q8NEF3 RNU6-20P-201ENST00000384106 107 ntBASIC-0.22□□□□□ -2.44
CCDC112Q8NEF3 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.22□□□□□ -2.44
CCDC112Q8NEF3 MIR802-201ENST00000390235 94 ntBASIC-0.22□□□□□ -2.44
CCDC112Q8NEF3 SNORD72-201ENST00000390994 80 ntBASIC-0.22□□□□□ -2.44
CCDC112Q8NEF3 RNA5SP268-201ENST00000516828 124 ntBASIC-0.22□□□□□ -2.44
CCDC112Q8NEF3 AC005176.2-201ENST00000596933 147 ntBASIC-0.22□□□□□ -2.44
CCDC112Q8NEF3 AL355297.3-201ENST00000604082 446 ntBASIC-0.22□□□□□ -2.44
CCDC112Q8NEF3 AP003357.1-201ENST00000604497 148 ntBASIC-0.22□□□□□ -2.44
CCDC112Q8NEF3 AC245008.1-201ENST00000608123 476 ntBASIC-0.22□□□□□ -2.44
CCDC112Q8NEF3 MIR1244-1-201ENST00000612829 85 ntBASIC-0.22□□□□□ -2.44
CCDC112Q8NEF3 MIR1244-3-201ENST00000635744 85 ntBASIC-0.22□□□□□ -2.44
CCDC112Q8NEF3 MIR1244-2-201ENST00000636449 85 ntBASIC-0.22□□□□□ -2.44
CCDC112Q8NEF3 MIR1244-4-202ENST00000636813 85 ntBASIC-0.22□□□□□ -2.44
CCDC112Q8NEF3 Y_RNA.72-201ENST00000362894 103 ntBASIC-0.23□□□□□ -2.45
CCDC112Q8NEF3 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.23□□□□□ -2.45
CCDC112Q8NEF3 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.23□□□□□ -2.45
CCDC112Q8NEF3 MIR145-201ENST00000384967 88 ntBASIC-0.23□□□□□ -2.45
CCDC112Q8NEF3 RNU6-127P-201ENST00000390897 107 ntBASIC-0.23□□□□□ -2.45
CCDC112Q8NEF3 SNORA26.5-201ENST00000391215 123 ntBASIC-0.23□□□□□ -2.45
CCDC112Q8NEF3 RNA5SP496-201ENST00000391240 109 ntBASIC-0.23□□□□□ -2.45
CCDC112Q8NEF3 MIR1257-201ENST00000408490 117 ntBASIC-0.23□□□□□ -2.45
CCDC112Q8NEF3 MIR1912-201ENST00000410389 80 ntBASIC-0.23□□□□□ -2.45
CCDC112Q8NEF3 MTND4P28-201ENST00000426217 387 ntBASIC-0.23□□□□□ -2.45
CCDC112Q8NEF3 AC236972.2-201ENST00000434979 310 ntBASIC-0.23□□□□□ -2.45
CCDC112Q8NEF3 RPL30P15-201ENST00000457129 321 ntBASIC-0.23□□□□□ -2.45
CCDC112Q8NEF3 RNU6-1016P-201ENST00000516689 94 ntBASIC-0.23□□□□□ -2.45
CCDC112Q8NEF3 AC024405.2-202ENST00000532731 184 ntBASIC-0.23□□□□□ -2.45
CCDC112Q8NEF3 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.23□□□□□ -2.45
CCDC112Q8NEF3 MIR8055-201ENST00000610739 97 ntBASIC-0.23□□□□□ -2.45
CCDC112Q8NEF3 SNORD114-31-201ENST00000363219 75 ntBASIC-0.24□□□□□ -2.45
CCDC112Q8NEF3 RNU6-626P-201ENST00000363354 107 ntBASIC-0.24□□□□□ -2.45
CCDC112Q8NEF3 SNORA32.1-201ENST00000364514 115 ntBASIC-0.24□□□□□ -2.45
CCDC112Q8NEF3 SNORD38B-201ENST00000384690 67 ntBASIC-0.24□□□□□ -2.45
CCDC112Q8NEF3 MIR588-201ENST00000384900 83 ntBASIC-0.24□□□□□ -2.45
CCDC112Q8NEF3 MIR610-201ENST00000385139 96 ntBASIC-0.24□□□□□ -2.45
CCDC112Q8NEF3 MIR644A-201ENST00000385262 94 ntBASIC-0.24□□□□□ -2.45
CCDC112Q8NEF3 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.24□□□□□ -2.45
CCDC112Q8NEF3 MTND1P1-201ENST00000445453 368 ntBASIC-0.24□□□□□ -2.45
CCDC112Q8NEF3 RNU7-115P-201ENST00000516433 55 ntBASIC-0.24□□□□□ -2.45
CCDC112Q8NEF3 Y_RNA.682-201ENST00000516457 100 ntBASIC-0.24□□□□□ -2.45
CCDC112Q8NEF3 MIR4636-201ENST00000582271 80 ntBASIC-0.24□□□□□ -2.45
CCDC112Q8NEF3 MIR7107-201ENST00000611489 80 ntBASIC-0.24□□□□□ -2.45
CCDC112Q8NEF3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.24□□□□□ -2.45
CCDC112Q8NEF3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.24□□□□□ -2.45
CCDC112Q8NEF3 AC087588.2-201ENST00000617667 426 ntBASIC-0.24□□□□□ -2.45
CCDC112Q8NEF3 AC134878.1-201ENST00000619901 243 ntBASIC-0.24□□□□□ -2.45
CCDC112Q8NEF3 AC092794.2-201ENST00000620933 563 ntBASIC-0.24□□□□□ -2.45
CCDC112Q8NEF3 SNORD38B-202ENST00000625943 69 ntBASIC-0.24□□□□□ -2.45
CCDC112Q8NEF3 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.25□□□□□ -2.45
CCDC112Q8NEF3 U8.7-201ENST00000364940 136 ntBASIC-0.25□□□□□ -2.45
CCDC112Q8NEF3 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.25□□□□□ -2.45
CCDC112Q8NEF3 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 496.7 ms