Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 RNU6-437P-201ENST00000459408 95 ntBASIC1.63□□□□□ -2.15
USP38Q8NB14 AC114811.1-201ENST00000507207 168 ntBASIC1.63□□□□□ -2.15
USP38Q8NB14 RNU6-1045P-201ENST00000516321 107 ntBASIC1.63□□□□□ -2.15
USP38Q8NB14 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.63□□□□□ -2.15
USP38Q8NB14 AP000648.3-201ENST00000623539 4507 ntBASIC1.63□□□□□ -2.15
USP38Q8NB14 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.63□□□□□ -2.15
USP38Q8NB14 AL161722.3-201ENST00000605789 2983 ntBASIC1.62□□□□□ -2.15
USP38Q8NB14 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.62□□□□□ -2.15
USP38Q8NB14 MIRLET7C-201ENST00000362160 84 ntBASIC1.62□□□□□ -2.15
USP38Q8NB14 RNU6-199P-201ENST00000362954 107 ntBASIC1.62□□□□□ -2.15
USP38Q8NB14 RNU6-1205P-201ENST00000363625 106 ntBASIC1.62□□□□□ -2.15
USP38Q8NB14 Y_RNA.483-201ENST00000384380 101 ntBASIC1.62□□□□□ -2.15
USP38Q8NB14 MIR891A-201ENST00000401237 79 ntBASIC1.62□□□□□ -2.15
USP38Q8NB14 MIR1278-201ENST00000408753 81 ntBASIC1.62□□□□□ -2.15
USP38Q8NB14 CYCTP-201ENST00000504253 315 ntBASIC1.62□□□□□ -2.15
USP38Q8NB14 SNORA27.4-201ENST00000516650 95 ntBASIC1.62□□□□□ -2.15
USP38Q8NB14 Y_RNA.714-201ENST00000517065 90 ntBASIC1.62□□□□□ -2.15
USP38Q8NB14 AC005357.1-201ENST00000588399 301 ntBASIC1.62□□□□□ -2.15
USP38Q8NB14 Y_RNA.293-201ENST00000364908 93 ntBASIC1.61□□□□□ -2.15
USP38Q8NB14 MIR522-201ENST00000385071 87 ntBASIC1.61□□□□□ -2.15
USP38Q8NB14 MT-TW-201ENST00000387382 68 ntBASIC1.61□□□□□ -2.15
USP38Q8NB14 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.61□□□□□ -2.15
USP38Q8NB14 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.61□□□□□ -2.15
USP38Q8NB14 RNU6-922P-201ENST00000516753 99 ntBASIC1.61□□□□□ -2.15
USP38Q8NB14 AP001282.2-201ENST00000616149 309 ntBASIC1.61□□□□□ -2.15
USP38Q8NB14 MIR6767-201ENST00000637302 66 ntBASIC1.61□□□□□ -2.15
USP38Q8NB14 RNU6-1272P-201ENST00000362776 107 ntBASIC1.6□□□□□ -2.15
USP38Q8NB14 U8.1-201ENST00000362843 134 ntBASIC1.6□□□□□ -2.15
USP38Q8NB14 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.6□□□□□ -2.15
USP38Q8NB14 MIR802-201ENST00000390235 94 ntBASIC1.6□□□□□ -2.15
USP38Q8NB14 MIR1304-201ENST00000408243 91 ntBASIC1.6□□□□□ -2.15
USP38Q8NB14 AL358176.2-201ENST00000425769 204 ntBASIC1.6□□□□□ -2.15
USP38Q8NB14 AL354695.1-201ENST00000427935 228 ntBASIC1.6□□□□□ -2.15
USP38Q8NB14 AC027119.1-201ENST00000440877 241 ntBASIC1.6□□□□□ -2.15
USP38Q8NB14 Y_RNA.637-201ENST00000459424 114 ntBASIC1.6□□□□□ -2.15
USP38Q8NB14 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.6□□□□□ -2.15
USP38Q8NB14 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.6□□□□□ -2.15
USP38Q8NB14 AL121890.5-201ENST00000620848 304 ntBASIC1.6□□□□□ -2.15
USP38Q8NB14 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.6□□□□□ -2.15
USP38Q8NB14 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
USP38Q8NB14 Y_RNA.117-201ENST00000363294 101 ntBASIC1.59□□□□□ -2.15
USP38Q8NB14 RNU6-1209P-201ENST00000363655 107 ntBASIC1.59□□□□□ -2.15
USP38Q8NB14 Y_RNA.396-201ENST00000383949 103 ntBASIC1.59□□□□□ -2.15
USP38Q8NB14 AC023790.1-201ENST00000482174 347 ntBASIC1.59□□□□□ -2.15
USP38Q8NB14 SNORD45.4-201ENST00000516629 73 ntBASIC1.59□□□□□ -2.15
USP38Q8NB14 RPL23AP91-201ENST00000569211 455 ntBASIC1.59□□□□□ -2.15
USP38Q8NB14 AC013791.1-201ENST00000616619 62 ntBASIC1.59□□□□□ -2.15
USP38Q8NB14 snoU18.1-201ENST00000629629 71 ntBASIC1.59□□□□□ -2.15
USP38Q8NB14 Y_RNA.44-201ENST00000362676 108 ntBASIC1.58□□□□□ -2.16
USP38Q8NB14 snoU2-30.1-201ENST00000365012 70 ntBASIC1.58□□□□□ -2.16
USP38Q8NB14 RNU6-1289P-201ENST00000384431 106 ntBASIC1.58□□□□□ -2.16
USP38Q8NB14 RNY1P4-201ENST00000384595 115 ntBASIC1.58□□□□□ -2.16
USP38Q8NB14 RNU6-383P-201ENST00000410864 94 ntBASIC1.58□□□□□ -2.16
USP38Q8NB14 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.58□□□□□ -2.16
USP38Q8NB14 RPS27P16-201ENST00000425758 201 ntBASIC1.58□□□□□ -2.16
USP38Q8NB14 HMGN1P33-201ENST00000432945 451 ntBASIC1.58□□□□□ -2.16
USP38Q8NB14 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.58□□□□□ -2.16
USP38Q8NB14 RPS29P23-201ENST00000458635 123 ntBASIC1.58□□□□□ -2.16
USP38Q8NB14 COX6CP14-201ENST00000469580 174 ntBASIC1.58□□□□□ -2.16
USP38Q8NB14 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.58□□□□□ -2.16
USP38Q8NB14 MIR5692C2-201ENST00000577959 77 ntBASIC1.58□□□□□ -2.16
USP38Q8NB14 MIR2681-201ENST00000581814 105 ntBASIC1.58□□□□□ -2.16
USP38Q8NB14 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
USP38Q8NB14 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.57□□□□□ -2.16
USP38Q8NB14 RNU6-833P-201ENST00000363486 107 ntBASIC1.57□□□□□ -2.16
USP38Q8NB14 U8.5-201ENST00000364528 136 ntBASIC1.57□□□□□ -2.16
USP38Q8NB14 SNORD50B-201ENST00000364995 70 ntBASIC1.57□□□□□ -2.16
USP38Q8NB14 MIR1302-3-201ENST00000408128 138 ntBASIC1.57□□□□□ -2.16
USP38Q8NB14 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.57□□□□□ -2.16
USP38Q8NB14 RNU6-322P-201ENST00000516010 103 ntBASIC1.57□□□□□ -2.16
USP38Q8NB14 RNU6-902P-201ENST00000517212 91 ntBASIC1.57□□□□□ -2.16
USP38Q8NB14 AL078604.3-201ENST00000615580 211 ntBASIC1.57□□□□□ -2.16
USP38Q8NB14 AC027279.3-201ENST00000625055 122 ntBASIC1.57□□□□□ -2.16
USP38Q8NB14 MIR367-201ENST00000362299 68 ntBASIC1.56□□□□□ -2.16
USP38Q8NB14 Y_RNA.14-201ENST00000362415 103 ntBASIC1.56□□□□□ -2.16
USP38Q8NB14 Y_RNA.54-201ENST00000362766 105 ntBASIC1.56□□□□□ -2.16
USP38Q8NB14 Y_RNA.217-201ENST00000364214 105 ntBASIC1.56□□□□□ -2.16
USP38Q8NB14 AL451046.2-201ENST00000403074 277 ntBASIC1.56□□□□□ -2.16
USP38Q8NB14 Y_RNA.641-201ENST00000459414 105 ntBASIC1.56□□□□□ -2.16
USP38Q8NB14 RNU6-947P-201ENST00000516264 106 ntBASIC1.56□□□□□ -2.16
USP38Q8NB14 RNA5SP61-201ENST00000516453 100 ntBASIC1.56□□□□□ -2.16
USP38Q8NB14 RN7SL793P-201ENST00000583259 296 ntBASIC1.56□□□□□ -2.16
USP38Q8NB14 MIR4762-201ENST00000585261 75 ntBASIC1.56□□□□□ -2.16
USP38Q8NB14 AL008718.3-201ENST00000610217 321 ntBASIC1.56□□□□□ -2.16
USP38Q8NB14 SNORD14E-201ENST00000364009 85 ntBASIC1.55□□□□□ -2.16
USP38Q8NB14 Y_RNA.275-201ENST00000364726 110 ntBASIC1.55□□□□□ -2.16
USP38Q8NB14 RNU6-740P-201ENST00000364734 105 ntBASIC1.55□□□□□ -2.16
USP38Q8NB14 RNU6-144P-201ENST00000383951 107 ntBASIC1.55□□□□□ -2.16
USP38Q8NB14 MIR516B2-201ENST00000385190 85 ntBASIC1.55□□□□□ -2.16
USP38Q8NB14 SNRPGP13-201ENST00000442212 177 ntBASIC1.55□□□□□ -2.16
USP38Q8NB14 RPL39P38-201ENST00000467018 153 ntBASIC1.55□□□□□ -2.16
USP38Q8NB14 MTCO2P24-201ENST00000515611 426 ntBASIC1.55□□□□□ -2.16
USP38Q8NB14 RNU6-917P-201ENST00000516294 104 ntBASIC1.55□□□□□ -2.16
USP38Q8NB14 Y_RNA.679-201ENST00000516416 91 ntBASIC1.55□□□□□ -2.16
USP38Q8NB14 UBE2WP1-201ENST00000362030 340 ntBASIC1.54□□□□□ -2.16
USP38Q8NB14 RNU6-674P-201ENST00000363831 107 ntBASIC1.54□□□□□ -2.16
USP38Q8NB14 RNU4-10P-201ENST00000364383 140 ntBASIC1.54□□□□□ -2.16
USP38Q8NB14 SNORA2.2-201ENST00000365473 135 ntBASIC1.54□□□□□ -2.16
USP38Q8NB14 RNU6-211P-201ENST00000384047 107 ntBASIC1.54□□□□□ -2.16
USP38Q8NB14 RNU6-472P-201ENST00000384299 107 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms