Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AC005899.2-201ENST00000584353 90 ntBASIC0.02□□□□□ -2.41
ZIC4Q8N9L1 AC005176.2-201ENST00000596933 147 ntBASIC0.02□□□□□ -2.41
ZIC4Q8N9L1 AP003357.1-201ENST00000604497 148 ntBASIC0.02□□□□□ -2.41
ZIC4Q8N9L1 AC022441.3-201ENST00000605737 136 ntBASIC0.02□□□□□ -2.41
ZIC4Q8N9L1 AC006441.5-201ENST00000612680 209 ntBASIC0.02□□□□□ -2.41
ZIC4Q8N9L1 uc_338.4-201ENST00000616635 176 ntBASIC0.02□□□□□ -2.41
ZIC4Q8N9L1 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.02□□□□□ -2.41
ZIC4Q8N9L1 Y_RNA.88-201ENST00000363029 99 ntBASIC0.01□□□□□ -2.41
ZIC4Q8N9L1 RNU6-626P-201ENST00000363354 107 ntBASIC0.01□□□□□ -2.41
ZIC4Q8N9L1 SNORA42.1-201ENST00000363515 137 ntBASIC0.01□□□□□ -2.41
ZIC4Q8N9L1 Y_RNA.258-201ENST00000364613 105 ntBASIC0.01□□□□□ -2.41
ZIC4Q8N9L1 Y_RNA.295-201ENST00000364918 102 ntBASIC0.01□□□□□ -2.41
ZIC4Q8N9L1 Y_RNA.329-201ENST00000365209 107 ntBASIC0.01□□□□□ -2.41
ZIC4Q8N9L1 SNORA24-201ENST00000384096 131 ntBASIC0.01□□□□□ -2.41
ZIC4Q8N9L1 SNORA8.2-201ENST00000384372 139 ntBASIC0.01□□□□□ -2.41
ZIC4Q8N9L1 Y_RNA.482-201ENST00000384377 111 ntBASIC0.01□□□□□ -2.41
ZIC4Q8N9L1 SNORD72-201ENST00000390994 80 ntBASIC0.01□□□□□ -2.41
ZIC4Q8N9L1 AL590004.1-201ENST00000405321 300 ntBASIC0.01□□□□□ -2.41
ZIC4Q8N9L1 MCFD2P1-201ENST00000417812 300 ntBASIC0.01□□□□□ -2.41
ZIC4Q8N9L1 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.01□□□□□ -2.41
ZIC4Q8N9L1 AC073261.1-201ENST00000429409 121 ntBASIC0.01□□□□□ -2.41
ZIC4Q8N9L1 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.01□□□□□ -2.41
ZIC4Q8N9L1 AC091951.2-201ENST00000500762 203 ntBASIC0.01□□□□□ -2.41
ZIC4Q8N9L1 RNU6-307P-201ENST00000516743 106 ntBASIC0.01□□□□□ -2.41
ZIC4Q8N9L1 RNU7-116P-201ENST00000516940 62 ntBASIC0.01□□□□□ -2.41
ZIC4Q8N9L1 AC024405.2-202ENST00000532731 184 ntBASIC0.01□□□□□ -2.41
ZIC4Q8N9L1 AC245505.1-201ENST00000556398 224 ntBASIC0.01□□□□□ -2.41
ZIC4Q8N9L1 AC127455.1-201ENST00000565496 145 ntBASIC0.01□□□□□ -2.41
ZIC4Q8N9L1 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
ZIC4Q8N9L1 MIR4305-201ENST00000583252 102 ntBASIC0.01□□□□□ -2.41
ZIC4Q8N9L1 MIR6740-201ENST00000618268 113 ntBASIC0.01□□□□□ -2.41
ZIC4Q8N9L1 SNORA36.1-201ENST00000363424 132 ntBASIC0□□□□□ -2.41
ZIC4Q8N9L1 RNA5SP325-201ENST00000363756 130 ntBASIC0□□□□□ -2.41
ZIC4Q8N9L1 MIR938-201ENST00000401216 83 ntBASIC0□□□□□ -2.41
ZIC4Q8N9L1 RNU6-855P-201ENST00000410395 104 ntBASIC0□□□□□ -2.41
ZIC4Q8N9L1 RNU6-710P-201ENST00000410424 105 ntBASIC0□□□□□ -2.41
ZIC4Q8N9L1 RNU6-847P-201ENST00000411115 108 ntBASIC0□□□□□ -2.41
ZIC4Q8N9L1 RNU6-1213P-201ENST00000517075 94 ntBASIC0□□□□□ -2.41
ZIC4Q8N9L1 AC024909.2-201ENST00000553035 286 ntBASIC0□□□□□ -2.41
ZIC4Q8N9L1 EIF1P4-201ENST00000572664 335 ntBASIC0□□□□□ -2.41
ZIC4Q8N9L1 MIR5188-201ENST00000583467 113 ntBASIC0□□□□□ -2.41
ZIC4Q8N9L1 POLR3GP1-201ENST00000594073 261 ntBASIC0□□□□□ -2.41
ZIC4Q8N9L1 AC011476.5-201ENST00000615594 130 ntBASIC0□□□□□ -2.41
ZIC4Q8N9L1 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
ZIC4Q8N9L1 SNORD81.1-201ENST00000363064 77 ntBASIC-0.01□□□□□ -2.41
ZIC4Q8N9L1 SNORD114-9-201ENST00000364370 72 ntBASIC-0.01□□□□□ -2.41
ZIC4Q8N9L1 SNORA63C-201ENST00000364578 129 ntBASIC-0.01□□□□□ -2.41
ZIC4Q8N9L1 U8.7-201ENST00000364940 136 ntBASIC-0.01□□□□□ -2.41
ZIC4Q8N9L1 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.01□□□□□ -2.41
ZIC4Q8N9L1 Y_RNA.577-201ENST00000384794 101 ntBASIC-0.01□□□□□ -2.41
ZIC4Q8N9L1 SNORA69.1-201ENST00000390904 137 ntBASIC-0.01□□□□□ -2.41
ZIC4Q8N9L1 SNORA75.4-201ENST00000391278 119 ntBASIC-0.01□□□□□ -2.41
ZIC4Q8N9L1 Y_RNA.599-201ENST00000410489 109 ntBASIC-0.01□□□□□ -2.41
ZIC4Q8N9L1 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-0.01□□□□□ -2.41
ZIC4Q8N9L1 RNU7-62P-201ENST00000458856 62 ntBASIC-0.01□□□□□ -2.41
ZIC4Q8N9L1 RNU7-102P-201ENST00000458948 62 ntBASIC-0.01□□□□□ -2.41
ZIC4Q8N9L1 RNU7-115P-201ENST00000516433 55 ntBASIC-0.01□□□□□ -2.41
ZIC4Q8N9L1 SNORA18.4-201ENST00000516440 124 ntBASIC-0.01□□□□□ -2.41
ZIC4Q8N9L1 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.01□□□□□ -2.41
ZIC4Q8N9L1 MIR4423-201ENST00000580922 80 ntBASIC-0.01□□□□□ -2.41
ZIC4Q8N9L1 AC090517.2-201ENST00000614966 680 ntBASIC-0.01□□□□□ -2.41
ZIC4Q8N9L1 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.01□□□□□ -2.41
ZIC4Q8N9L1 MIR3688-2-201ENST00000636963 87 ntBASIC-0.01□□□□□ -2.41
ZIC4Q8N9L1 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.01□□□□□ -2.41
ZIC4Q8N9L1 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.01□□□□□ -2.41
ZIC4Q8N9L1 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.02□□□□□ -2.41
ZIC4Q8N9L1 Y_RNA.230-201ENST00000364348 109 ntBASIC-0.02□□□□□ -2.41
ZIC4Q8N9L1 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.02□□□□□ -2.41
ZIC4Q8N9L1 RNU4-24P-201ENST00000364565 139 ntBASIC-0.02□□□□□ -2.41
ZIC4Q8N9L1 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.02□□□□□ -2.41
ZIC4Q8N9L1 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.02□□□□□ -2.41
ZIC4Q8N9L1 Y_RNA.570-201ENST00000384750 101 ntBASIC-0.02□□□□□ -2.41
ZIC4Q8N9L1 Y_RNA.573-201ENST00000384763 105 ntBASIC-0.02□□□□□ -2.41
ZIC4Q8N9L1 SNORD78.2-201ENST00000391076 69 ntBASIC-0.02□□□□□ -2.41
ZIC4Q8N9L1 SNORA75.6-201ENST00000391318 127 ntBASIC-0.02□□□□□ -2.41
ZIC4Q8N9L1 MIR1278-201ENST00000408753 81 ntBASIC-0.02□□□□□ -2.41
ZIC4Q8N9L1 RNU6-1156P-201ENST00000410365 100 ntBASIC-0.02□□□□□ -2.41
ZIC4Q8N9L1 RNU4-14P-201ENST00000410858 122 ntBASIC-0.02□□□□□ -2.41
ZIC4Q8N9L1 MTND3P8-201ENST00000412909 339 ntBASIC-0.02□□□□□ -2.41
ZIC4Q8N9L1 MTND1P2-201ENST00000430604 821 ntBASIC-0.02□□□□□ -2.41
ZIC4Q8N9L1 SNORD11-201ENST00000459124 84 ntBASIC-0.02□□□□□ -2.41
ZIC4Q8N9L1 SNORD92-201ENST00000585078 85 ntBASIC-0.02□□□□□ -2.41
ZIC4Q8N9L1 AC138305.3-201ENST00000624988 240 ntBASIC-0.02□□□□□ -2.41
ZIC4Q8N9L1 AC010332.2-201ENST00000613083 1904 ntBASIC-0.03□□□□□ -2.41
ZIC4Q8N9L1 MIR411-201ENST00000362239 96 ntBASIC-0.03□□□□□ -2.41
ZIC4Q8N9L1 RNA5SP257-201ENST00000363023 116 ntBASIC-0.03□□□□□ -2.41
ZIC4Q8N9L1 RNY3P11-201ENST00000364153 102 ntBASIC-0.03□□□□□ -2.41
ZIC4Q8N9L1 RNU4-50P-201ENST00000364361 141 ntBASIC-0.03□□□□□ -2.41
ZIC4Q8N9L1 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.03□□□□□ -2.41
ZIC4Q8N9L1 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.03□□□□□ -2.41
ZIC4Q8N9L1 MIR125B2-201ENST00000385128 89 ntBASIC-0.03□□□□□ -2.41
ZIC4Q8N9L1 RNU6-510P-201ENST00000391239 108 ntBASIC-0.03□□□□□ -2.41
ZIC4Q8N9L1 AC107399.1-201ENST00000451226 265 ntBASIC-0.03□□□□□ -2.41
ZIC4Q8N9L1 snoU13.16-201ENST00000459350 104 ntBASIC-0.03□□□□□ -2.41
ZIC4Q8N9L1 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-0.03□□□□□ -2.41
ZIC4Q8N9L1 RPL23AP54-201ENST00000495129 419 ntBASIC-0.03□□□□□ -2.41
ZIC4Q8N9L1 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.03□□□□□ -2.41
ZIC4Q8N9L1 AC112693.2-201ENST00000556538 232 ntBASIC-0.03□□□□□ -2.41
ZIC4Q8N9L1 RPL23AP91-201ENST00000569211 455 ntBASIC-0.03□□□□□ -2.41
ZIC4Q8N9L1 MIR3678-201ENST00000578455 94 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms