Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.42□□□□□ -2.34
NUDCD3Q8IVD9 RNU6-437P-201ENST00000459408 95 ntBASIC0.42□□□□□ -2.34
NUDCD3Q8IVD9 RPL23AP91-201ENST00000569211 455 ntBASIC0.42□□□□□ -2.34
NUDCD3Q8IVD9 AL080274.1-201ENST00000605565 220 ntBASIC0.42□□□□□ -2.34
NUDCD3Q8IVD9 MIR4791-201ENST00000607666 84 ntBASIC0.42□□□□□ -2.34
NUDCD3Q8IVD9 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.42□□□□□ -2.34
NUDCD3Q8IVD9 MTND1P7-201ENST00000632801 297 ntBASIC0.42□□□□□ -2.34
NUDCD3Q8IVD9 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.42□□□□□ -2.34
NUDCD3Q8IVD9 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.41□□□□□ -2.34
NUDCD3Q8IVD9 Y_RNA.142-201ENST00000363491 102 ntBASIC0.41□□□□□ -2.34
NUDCD3Q8IVD9 SNORD45.3-201ENST00000363836 72 ntBASIC0.41□□□□□ -2.34
NUDCD3Q8IVD9 RNU6-1048P-201ENST00000364054 107 ntBASIC0.41□□□□□ -2.34
NUDCD3Q8IVD9 Y_RNA.496-201ENST00000384444 101 ntBASIC0.41□□□□□ -2.34
NUDCD3Q8IVD9 Y_RNA.537-201ENST00000384626 109 ntBASIC0.41□□□□□ -2.34
NUDCD3Q8IVD9 AL603910.2-201ENST00000407268 136 ntBASIC0.41□□□□□ -2.34
NUDCD3Q8IVD9 SNORA36B-201ENST00000410438 131 ntBASIC0.41□□□□□ -2.34
NUDCD3Q8IVD9 snoU13.21-201ENST00000459368 105 ntBASIC0.41□□□□□ -2.34
NUDCD3Q8IVD9 AC010655.3-201ENST00000478818 450 ntBASIC0.41□□□□□ -2.34
NUDCD3Q8IVD9 MIR2681-201ENST00000581814 105 ntBASIC0.41□□□□□ -2.34
NUDCD3Q8IVD9 AC084781.2-201ENST00000615568 161 ntBASIC0.41□□□□□ -2.34
NUDCD3Q8IVD9 AC104985.2-201ENST00000620598 500 ntBASIC0.41□□□□□ -2.34
NUDCD3Q8IVD9 MIR5087-201ENST00000635826 76 ntBASIC0.41□□□□□ -2.34
NUDCD3Q8IVD9 MIR1302-1-201ENST00000637932 143 ntBASIC0.41□□□□□ -2.34
NUDCD3Q8IVD9 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
NUDCD3Q8IVD9 Y_RNA.384-201ENST00000383909 102 ntBASIC0.4□□□□□ -2.35
NUDCD3Q8IVD9 RNU6-937P-201ENST00000384325 106 ntBASIC0.4□□□□□ -2.35
NUDCD3Q8IVD9 Y_RNA.551-201ENST00000384661 102 ntBASIC0.4□□□□□ -2.35
NUDCD3Q8IVD9 RNU2-14P-201ENST00000411053 191 ntBASIC0.4□□□□□ -2.35
NUDCD3Q8IVD9 MTND1P14-201ENST00000427400 950 ntBASIC0.4□□□□□ -2.35
NUDCD3Q8IVD9 AC098934.3-201ENST00000430450 190 ntBASIC0.4□□□□□ -2.35
NUDCD3Q8IVD9 RNU7-141P-201ENST00000459304 62 ntBASIC0.4□□□□□ -2.35
NUDCD3Q8IVD9 RNU4-77P-201ENST00000516692 156 ntBASIC0.4□□□□□ -2.35
NUDCD3Q8IVD9 AC092447.9-201ENST00000603395 144 ntBASIC0.4□□□□□ -2.35
NUDCD3Q8IVD9 Z83818.1-201ENST00000603584 150 ntBASIC0.4□□□□□ -2.35
NUDCD3Q8IVD9 AC006441.5-201ENST00000612680 209 ntBASIC0.4□□□□□ -2.35
NUDCD3Q8IVD9 RMST_2.1-201ENST00000617263 136 ntBASIC0.4□□□□□ -2.35
NUDCD3Q8IVD9 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
NUDCD3Q8IVD9 RNU6-1115P-201ENST00000362490 106 ntBASIC0.39□□□□□ -2.35
NUDCD3Q8IVD9 RNU6-674P-201ENST00000363831 107 ntBASIC0.39□□□□□ -2.35
NUDCD3Q8IVD9 Y_RNA.376-201ENST00000365638 108 ntBASIC0.39□□□□□ -2.35
NUDCD3Q8IVD9 RNU6-21P-201ENST00000384710 107 ntBASIC0.39□□□□□ -2.35
NUDCD3Q8IVD9 RNU6-205P-201ENST00000390858 107 ntBASIC0.39□□□□□ -2.35
NUDCD3Q8IVD9 AC092628.1-201ENST00000436250 252 ntBASIC0.39□□□□□ -2.35
NUDCD3Q8IVD9 SNORD11-201ENST00000459124 84 ntBASIC0.39□□□□□ -2.35
NUDCD3Q8IVD9 RNU4-57P-201ENST00000515980 135 ntBASIC0.39□□□□□ -2.35
NUDCD3Q8IVD9 RPS29P30-201ENST00000600975 111 ntBASIC0.39□□□□□ -2.35
NUDCD3Q8IVD9 AL121655.1-201ENST00000605811 308 ntBASIC0.39□□□□□ -2.35
NUDCD3Q8IVD9 AC099654.14-201ENST00000638599 341 ntBASIC0.39□□□□□ -2.35
NUDCD3Q8IVD9 MIR377-201ENST00000362145 69 ntBASIC0.38□□□□□ -2.35
NUDCD3Q8IVD9 RNU4-80P-201ENST00000363200 141 ntBASIC0.38□□□□□ -2.35
NUDCD3Q8IVD9 RNU6-580P-201ENST00000365159 107 ntBASIC0.38□□□□□ -2.35
NUDCD3Q8IVD9 SNORA1.2-201ENST00000365189 134 ntBASIC0.38□□□□□ -2.35
NUDCD3Q8IVD9 SNORD63-201ENST00000384262 68 ntBASIC0.38□□□□□ -2.35
NUDCD3Q8IVD9 Y_RNA.505-201ENST00000384489 102 ntBASIC0.38□□□□□ -2.35
NUDCD3Q8IVD9 MIR573-201ENST00000384964 99 ntBASIC0.38□□□□□ -2.35
NUDCD3Q8IVD9 MIR140-201ENST00000385282 100 ntBASIC0.38□□□□□ -2.35
NUDCD3Q8IVD9 MT-TN-201ENST00000387400 73 ntBASIC0.38□□□□□ -2.35
NUDCD3Q8IVD9 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.38□□□□□ -2.35
NUDCD3Q8IVD9 RNU6-177P-201ENST00000411257 104 ntBASIC0.38□□□□□ -2.35
NUDCD3Q8IVD9 SNORD83.1-201ENST00000411362 77 ntBASIC0.38□□□□□ -2.35
NUDCD3Q8IVD9 Y_RNA.661-201ENST00000516003 99 ntBASIC0.38□□□□□ -2.35
NUDCD3Q8IVD9 AC005357.1-201ENST00000588399 301 ntBASIC0.38□□□□□ -2.35
NUDCD3Q8IVD9 AL132765.2-201ENST00000610812 351 ntBASIC0.38□□□□□ -2.35
NUDCD3Q8IVD9 Y_RNA.39-201ENST00000362620 98 ntBASIC0.37□□□□□ -2.35
NUDCD3Q8IVD9 Y_RNA.143-201ENST00000363520 106 ntBASIC0.37□□□□□ -2.35
NUDCD3Q8IVD9 Y_RNA.187-201ENST00000363918 113 ntBASIC0.37□□□□□ -2.35
NUDCD3Q8IVD9 RNU6-801P-201ENST00000364087 105 ntBASIC0.37□□□□□ -2.35
NUDCD3Q8IVD9 RNU4-50P-201ENST00000364361 141 ntBASIC0.37□□□□□ -2.35
NUDCD3Q8IVD9 RNU1-133P-201ENST00000364867 167 ntBASIC0.37□□□□□ -2.35
NUDCD3Q8IVD9 Y_RNA.383-201ENST00000383855 97 ntBASIC0.37□□□□□ -2.35
NUDCD3Q8IVD9 Y_RNA.390-201ENST00000383932 102 ntBASIC0.37□□□□□ -2.35
NUDCD3Q8IVD9 Y_RNA.439-201ENST00000384119 94 ntBASIC0.37□□□□□ -2.35
NUDCD3Q8IVD9 RNU6-42P-201ENST00000384165 107 ntBASIC0.37□□□□□ -2.35
NUDCD3Q8IVD9 SNORA72.4-201ENST00000384174 132 ntBASIC0.37□□□□□ -2.35
NUDCD3Q8IVD9 SNORA50A-201ENST00000384225 134 ntBASIC0.37□□□□□ -2.35
NUDCD3Q8IVD9 MIR520H-201ENST00000385126 88 ntBASIC0.37□□□□□ -2.35
NUDCD3Q8IVD9 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.37□□□□□ -2.35
NUDCD3Q8IVD9 RNU6-847P-201ENST00000411115 108 ntBASIC0.37□□□□□ -2.35
NUDCD3Q8IVD9 AC015818.7-201ENST00000428754 109 ntBASIC0.37□□□□□ -2.35
NUDCD3Q8IVD9 AL160004.2-201ENST00000432935 350 ntBASIC0.37□□□□□ -2.35
NUDCD3Q8IVD9 AC087499.7-201ENST00000441958 109 ntBASIC0.37□□□□□ -2.35
NUDCD3Q8IVD9 RNU2-13P-201ENST00000515909 113 ntBASIC0.37□□□□□ -2.35
NUDCD3Q8IVD9 SCARNA8-201ENST00000515924 131 ntBASIC0.37□□□□□ -2.35
NUDCD3Q8IVD9 RN7SKP12-201ENST00000516275 143 ntBASIC0.37□□□□□ -2.35
NUDCD3Q8IVD9 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.37□□□□□ -2.35
NUDCD3Q8IVD9 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.37□□□□□ -2.35
NUDCD3Q8IVD9 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.37□□□□□ -2.35
NUDCD3Q8IVD9 AP000753.3-201ENST00000604083 169 ntBASIC0.37□□□□□ -2.35
NUDCD3Q8IVD9 SNORD58B-201ENST00000607313 66 ntBASIC0.37□□□□□ -2.35
NUDCD3Q8IVD9 AC243994.1-201ENST00000618627 109 ntBASIC0.37□□□□□ -2.35
NUDCD3Q8IVD9 MIR6513-201ENST00000621188 64 ntBASIC0.37□□□□□ -2.35
NUDCD3Q8IVD9 AC243829.3-201ENST00000622177 108 ntBASIC0.37□□□□□ -2.35
NUDCD3Q8IVD9 Y_RNA.80-201ENST00000362996 102 ntBASIC0.36□□□□□ -2.35
NUDCD3Q8IVD9 Y_RNA.813-201ENST00000364639 102 ntBASIC0.36□□□□□ -2.35
NUDCD3Q8IVD9 Y_RNA.286-201ENST00000364813 102 ntBASIC0.36□□□□□ -2.35
NUDCD3Q8IVD9 RNU6-934P-201ENST00000365154 107 ntBASIC0.36□□□□□ -2.35
NUDCD3Q8IVD9 Y_RNA.485-201ENST00000384395 102 ntBASIC0.36□□□□□ -2.35
NUDCD3Q8IVD9 RNU6-125P-201ENST00000384505 107 ntBASIC0.36□□□□□ -2.35
NUDCD3Q8IVD9 MIR520F-201ENST00000384824 87 ntBASIC0.36□□□□□ -2.35
NUDCD3Q8IVD9 AC244023.1-201ENST00000426884 112 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 163.6 ms