Protein–RNA interactions for Protein: Q86VH5

LRRTM3, Leucine-rich repeat transmembrane neuronal protein 3, humanhuman

Predictions only

Length 581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3Q86VH5 SEPT7P4-201ENST00000437076 306 ntBASIC2.2□□□□□ -2.06
LRRTM3Q86VH5 AC104435.1-201ENST00000483483 166 ntBASIC2.2□□□□□ -2.06
LRRTM3Q86VH5 RNU6-365P-201ENST00000517113 106 ntBASIC2.2□□□□□ -2.06
LRRTM3Q86VH5 Y_RNA.783-201ENST00000613546 102 ntBASIC2.2□□□□□ -2.06
LRRTM3Q86VH5 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LRRTM3Q86VH5 Y_RNA.486-201ENST00000384398 107 ntBASIC2.19□□□□□ -2.06
LRRTM3Q86VH5 MIR1267-201ENST00000408723 78 ntBASIC2.19□□□□□ -2.06
LRRTM3Q86VH5 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.19□□□□□ -2.06
LRRTM3Q86VH5 AC074198.2-201ENST00000508153 258 ntBASIC2.19□□□□□ -2.06
LRRTM3Q86VH5 AC107027.2-201ENST00000512197 115 ntBASIC2.19□□□□□ -2.06
LRRTM3Q86VH5 MIR7843-201ENST00000622274 79 ntBASIC2.19□□□□□ -2.06
LRRTM3Q86VH5 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
LRRTM3Q86VH5 Y_RNA.441-201ENST00000384123 112 ntBASIC2.18□□□□□ -2.06
LRRTM3Q86VH5 RNU6-439P-201ENST00000384188 106 ntBASIC2.18□□□□□ -2.06
LRRTM3Q86VH5 MIR504-201ENST00000385065 83 ntBASIC2.18□□□□□ -2.06
LRRTM3Q86VH5 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
LRRTM3Q86VH5 AC006461.1-201ENST00000412637 326 ntBASIC2.18□□□□□ -2.06
LRRTM3Q86VH5 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.18□□□□□ -2.06
LRRTM3Q86VH5 MIR4448-201ENST00000584360 86 ntBASIC2.18□□□□□ -2.06
LRRTM3Q86VH5 MIR8074-201ENST00000615081 81 ntBASIC2.18□□□□□ -2.06
LRRTM3Q86VH5 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
LRRTM3Q86VH5 AC005336.3-201ENST00000623833 2679 ntBASIC2.18□□□□□ -2.06
LRRTM3Q86VH5 Y_RNA.634-201ENST00000364811 113 ntBASIC2.17□□□□□ -2.06
LRRTM3Q86VH5 RNU6-203P-201ENST00000384038 104 ntBASIC2.17□□□□□ -2.06
LRRTM3Q86VH5 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
LRRTM3Q86VH5 AC004965.1-201ENST00000413033 213 ntBASIC2.17□□□□□ -2.06
LRRTM3Q86VH5 SNORA44.1-201ENST00000517031 108 ntBASIC2.17□□□□□ -2.06
LRRTM3Q86VH5 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
LRRTM3Q86VH5 AC097639.2-201ENST00000603159 172 ntBASIC2.17□□□□□ -2.06
LRRTM3Q86VH5 AC092881.1-201ENST00000638218 2733 ntBASIC2.17□□□□□ -2.06
LRRTM3Q86VH5 ZNF720P1-201ENST00000562403 1939 ntBASIC2.17□□□□□ -2.06
LRRTM3Q86VH5 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
LRRTM3Q86VH5 SNORD38C-201ENST00000384381 69 ntBASIC2.16□□□□□ -2.06
LRRTM3Q86VH5 MIR194-1-201ENST00000384892 85 ntBASIC2.16□□□□□ -2.06
LRRTM3Q86VH5 RNU6-239P-201ENST00000390990 99 ntBASIC2.16□□□□□ -2.06
LRRTM3Q86VH5 RNU6-1135P-201ENST00000411083 103 ntBASIC2.16□□□□□ -2.06
LRRTM3Q86VH5 RNU5E-9P-201ENST00000411164 104 ntBASIC2.16□□□□□ -2.06
LRRTM3Q86VH5 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.16□□□□□ -2.06
LRRTM3Q86VH5 RNU6-504P-201ENST00000516568 104 ntBASIC2.16□□□□□ -2.06
LRRTM3Q86VH5 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.16□□□□□ -2.06
LRRTM3Q86VH5 SNRPGP19-201ENST00000603826 189 ntBASIC2.16□□□□□ -2.06
LRRTM3Q86VH5 AC006441.5-201ENST00000612680 209 ntBASIC2.16□□□□□ -2.06
LRRTM3Q86VH5 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LRRTM3Q86VH5 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
LRRTM3Q86VH5 Y_RNA.91-201ENST00000363042 107 ntBASIC2.15□□□□□ -2.07
LRRTM3Q86VH5 RNU4-84P-201ENST00000364200 139 ntBASIC2.15□□□□□ -2.07
LRRTM3Q86VH5 Y_RNA.337-201ENST00000365312 102 ntBASIC2.15□□□□□ -2.07
LRRTM3Q86VH5 Y_RNA.464-201ENST00000384282 110 ntBASIC2.15□□□□□ -2.07
LRRTM3Q86VH5 MIR452-201ENST00000385020 85 ntBASIC2.15□□□□□ -2.07
LRRTM3Q86VH5 MIR764-201ENST00000390811 85 ntBASIC2.15□□□□□ -2.07
LRRTM3Q86VH5 HMGN2P19-201ENST00000425149 265 ntBASIC2.15□□□□□ -2.07
LRRTM3Q86VH5 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.15□□□□□ -2.07
LRRTM3Q86VH5 MIR4778-201ENST00000577635 80 ntBASIC2.15□□□□□ -2.07
LRRTM3Q86VH5 MIR378D2-201ENST00000580636 98 ntBASIC2.15□□□□□ -2.07
LRRTM3Q86VH5 AC002984.1-201ENST00000591692 448 ntBASIC2.15□□□□□ -2.07
LRRTM3Q86VH5 AC103810.8-201ENST00000607347 118 ntBASIC2.15□□□□□ -2.07
LRRTM3Q86VH5 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
LRRTM3Q86VH5 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
LRRTM3Q86VH5 RNU6-268P-201ENST00000364174 107 ntBASIC2.14□□□□□ -2.07
LRRTM3Q86VH5 Y_RNA.272-201ENST00000364696 102 ntBASIC2.14□□□□□ -2.07
LRRTM3Q86VH5 SNRPGP13-201ENST00000442212 177 ntBASIC2.14□□□□□ -2.07
LRRTM3Q86VH5 AC093850.1-201ENST00000454121 251 ntBASIC2.14□□□□□ -2.07
LRRTM3Q86VH5 RPL23AP42-201ENST00000471152 471 ntBASIC2.14□□□□□ -2.07
LRRTM3Q86VH5 MIR5089-201ENST00000580047 84 ntBASIC2.14□□□□□ -2.07
LRRTM3Q86VH5 AL096840.1-201ENST00000603287 93 ntBASIC2.14□□□□□ -2.07
LRRTM3Q86VH5 AC095038.3-201ENST00000634439 195 ntBASIC2.14□□□□□ -2.07
LRRTM3Q86VH5 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
LRRTM3Q86VH5 MIRLET7G-201ENST00000362280 84 ntBASIC2.13□□□□□ -2.07
LRRTM3Q86VH5 SNORD24-201ENST00000383884 75 ntBASIC2.13□□□□□ -2.07
LRRTM3Q86VH5 Y_RNA.521-201ENST00000384560 114 ntBASIC2.13□□□□□ -2.07
LRRTM3Q86VH5 U8.13-201ENST00000390842 128 ntBASIC2.13□□□□□ -2.07
LRRTM3Q86VH5 AL161935.2-201ENST00000414627 60 ntBASIC2.13□□□□□ -2.07
LRRTM3Q86VH5 SNRPGP14-201ENST00000435400 219 ntBASIC2.13□□□□□ -2.07
LRRTM3Q86VH5 Y_RNA.666-201ENST00000516187 112 ntBASIC2.13□□□□□ -2.07
LRRTM3Q86VH5 SNORD116-25-201ENST00000516517 92 ntBASIC2.13□□□□□ -2.07
LRRTM3Q86VH5 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.13□□□□□ -2.07
LRRTM3Q86VH5 RNU6-199P-201ENST00000362954 107 ntBASIC2.12□□□□□ -2.07
LRRTM3Q86VH5 MIR30A-201ENST00000385092 71 ntBASIC2.12□□□□□ -2.07
LRRTM3Q86VH5 AL591806.2-201ENST00000433122 173 ntBASIC2.12□□□□□ -2.07
LRRTM3Q86VH5 AC015922.2-201ENST00000435593 184 ntBASIC2.12□□□□□ -2.07
LRRTM3Q86VH5 SUMO2P16-201ENST00000519475 264 ntBASIC2.12□□□□□ -2.07
LRRTM3Q86VH5 DEFB122-202ENST00000569013 197 ntBASIC2.12□□□□□ -2.07
LRRTM3Q86VH5 AC104465.1-201ENST00000611365 139 ntBASIC2.12□□□□□ -2.07
LRRTM3Q86VH5 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.11□□□□□ -2.07
LRRTM3Q86VH5 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.11□□□□□ -2.07
LRRTM3Q86VH5 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
LRRTM3Q86VH5 MIR513A1-201ENST00000385138 129 ntBASIC2.11□□□□□ -2.07
LRRTM3Q86VH5 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
LRRTM3Q86VH5 MIR676-201ENST00000390702 67 ntBASIC2.11□□□□□ -2.07
LRRTM3Q86VH5 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.11□□□□□ -2.07
LRRTM3Q86VH5 MIR548O-201ENST00000408583 114 ntBASIC2.11□□□□□ -2.07
LRRTM3Q86VH5 RNU6-394P-201ENST00000410735 107 ntBASIC2.11□□□□□ -2.07
LRRTM3Q86VH5 RNU6-693P-201ENST00000516134 107 ntBASIC2.11□□□□□ -2.07
LRRTM3Q86VH5 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
LRRTM3Q86VH5 ZNF355P-201ENST00000427301 3216 ntBASIC2.1□□□□□ -2.07
LRRTM3Q86VH5 RNA5SP432-201ENST00000362480 116 ntBASIC2.1□□□□□ -2.07
LRRTM3Q86VH5 Y_RNA.66-201ENST00000362862 102 ntBASIC2.1□□□□□ -2.07
LRRTM3Q86VH5 RNA5SP160-201ENST00000364866 120 ntBASIC2.1□□□□□ -2.07
LRRTM3Q86VH5 RNA5SP259-201ENST00000365541 109 ntBASIC2.1□□□□□ -2.07
LRRTM3Q86VH5 SNORD61-201ENST00000384252 73 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 239 ms