Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 SNORD111.1-201ENST00000516421 86 ntBASIC1.22□□□□□ -2.21
LDB1Q86U70 SNORA74.3-201ENST00000517108 154 ntBASIC1.22□□□□□ -2.21
LDB1Q86U70 DEFB108E-201ENST00000524692 240 ntBASIC1.22□□□□□ -2.21
LDB1Q86U70 AC008737.2-201ENST00000599446 118 ntBASIC1.22□□□□□ -2.21
LDB1Q86U70 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.22□□□□□ -2.21
LDB1Q86U70 RNU6-238P-201ENST00000363313 106 ntBASIC1.21□□□□□ -2.22
LDB1Q86U70 Y_RNA.376-201ENST00000365638 108 ntBASIC1.21□□□□□ -2.22
LDB1Q86U70 SNORD38C-201ENST00000384381 69 ntBASIC1.21□□□□□ -2.22
LDB1Q86U70 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.21□□□□□ -2.22
LDB1Q86U70 AC023449.1-201ENST00000454464 154 ntBASIC1.21□□□□□ -2.22
LDB1Q86U70 SNORA31.2-201ENST00000516019 134 ntBASIC1.21□□□□□ -2.22
LDB1Q86U70 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.21□□□□□ -2.22
LDB1Q86U70 AC008507.4-201ENST00000585464 127 ntBASIC1.21□□□□□ -2.22
LDB1Q86U70 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.21□□□□□ -2.22
LDB1Q86U70 snoU18.1-201ENST00000629629 71 ntBASIC1.21□□□□□ -2.22
LDB1Q86U70 U6.104-201ENST00000637979 90 ntBASIC1.21□□□□□ -2.22
LDB1Q86U70 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.21□□□□□ -2.22
LDB1Q86U70 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
LDB1Q86U70 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
LDB1Q86U70 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
LDB1Q86U70 Y_RNA.14-201ENST00000362415 103 ntBASIC1.2□□□□□ -2.22
LDB1Q86U70 SNORA25.8-201ENST00000364831 128 ntBASIC1.2□□□□□ -2.22
LDB1Q86U70 Y_RNA.512-201ENST00000384518 102 ntBASIC1.2□□□□□ -2.22
LDB1Q86U70 RNU6-738P-201ENST00000384531 106 ntBASIC1.2□□□□□ -2.22
LDB1Q86U70 RNA5SP496-201ENST00000391240 109 ntBASIC1.2□□□□□ -2.22
LDB1Q86U70 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.2□□□□□ -2.22
LDB1Q86U70 AC245047.7-201ENST00000440265 293 ntBASIC1.2□□□□□ -2.22
LDB1Q86U70 AC048334.1-201ENST00000477975 159 ntBASIC1.2□□□□□ -2.22
LDB1Q86U70 RNU6-1053P-201ENST00000515930 101 ntBASIC1.2□□□□□ -2.22
LDB1Q86U70 SNORA18.7-201ENST00000516910 131 ntBASIC1.2□□□□□ -2.22
LDB1Q86U70 MIR4724-201ENST00000579485 89 ntBASIC1.2□□□□□ -2.22
LDB1Q86U70 AL359821.1-201ENST00000605519 182 ntBASIC1.2□□□□□ -2.22
LDB1Q86U70 AP001282.2-201ENST00000616149 309 ntBASIC1.2□□□□□ -2.22
LDB1Q86U70 MIR8062-201ENST00000621515 85 ntBASIC1.2□□□□□ -2.22
LDB1Q86U70 MIR367-201ENST00000362299 68 ntBASIC1.19□□□□□ -2.22
LDB1Q86U70 Y_RNA.44-201ENST00000362676 108 ntBASIC1.19□□□□□ -2.22
LDB1Q86U70 Y_RNA.275-201ENST00000364726 110 ntBASIC1.19□□□□□ -2.22
LDB1Q86U70 Y_RNA.293-201ENST00000364908 93 ntBASIC1.19□□□□□ -2.22
LDB1Q86U70 SNORA25-201ENST00000384384 134 ntBASIC1.19□□□□□ -2.22
LDB1Q86U70 Y_RNA.574-201ENST00000384766 95 ntBASIC1.19□□□□□ -2.22
LDB1Q86U70 MIR1302-6-201ENST00000408466 90 ntBASIC1.19□□□□□ -2.22
LDB1Q86U70 MIR548F4-201ENST00000408515 105 ntBASIC1.19□□□□□ -2.22
LDB1Q86U70 RNU6-383P-201ENST00000410864 94 ntBASIC1.19□□□□□ -2.22
LDB1Q86U70 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.19□□□□□ -2.22
LDB1Q86U70 SNORA70.22-201ENST00000517160 124 ntBASIC1.19□□□□□ -2.22
LDB1Q86U70 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.19□□□□□ -2.22
LDB1Q86U70 AL008718.3-201ENST00000610217 321 ntBASIC1.19□□□□□ -2.22
LDB1Q86U70 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.19□□□□□ -2.22
LDB1Q86U70 MIR335-201ENST00000362173 94 ntBASIC1.18□□□□□ -2.22
LDB1Q86U70 Y_RNA.176-201ENST00000363815 109 ntBASIC1.18□□□□□ -2.22
LDB1Q86U70 Y_RNA.237-201ENST00000364439 102 ntBASIC1.18□□□□□ -2.22
LDB1Q86U70 Y_RNA.327-201ENST00000365201 102 ntBASIC1.18□□□□□ -2.22
LDB1Q86U70 MIR520C-201ENST00000385005 87 ntBASIC1.18□□□□□ -2.22
LDB1Q86U70 RNU6-321P-201ENST00000410912 106 ntBASIC1.18□□□□□ -2.22
LDB1Q86U70 SNRPGP14-201ENST00000435400 219 ntBASIC1.18□□□□□ -2.22
LDB1Q86U70 RNU7-43P-201ENST00000516554 64 ntBASIC1.18□□□□□ -2.22
LDB1Q86U70 AL117187.1-201ENST00000555482 181 ntBASIC1.18□□□□□ -2.22
LDB1Q86U70 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.18□□□□□ -2.22
LDB1Q86U70 MIR5688-201ENST00000580619 83 ntBASIC1.18□□□□□ -2.22
LDB1Q86U70 AL022345.2-201ENST00000606307 135 ntBASIC1.18□□□□□ -2.22
LDB1Q86U70 AL096861.1-201ENST00000610899 123 ntBASIC1.18□□□□□ -2.22
LDB1Q86U70 AL442644.1-201ENST00000454390 3105 ntBASIC1.18□□□□□ -2.22
LDB1Q86U70 RNU6-268P-201ENST00000364174 107 ntBASIC1.17□□□□□ -2.22
LDB1Q86U70 RNU6-1289P-201ENST00000384431 106 ntBASIC1.17□□□□□ -2.22
LDB1Q86U70 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
LDB1Q86U70 SNORD72-201ENST00000390994 80 ntBASIC1.17□□□□□ -2.22
LDB1Q86U70 SNORD123-201ENST00000459473 70 ntBASIC1.17□□□□□ -2.22
LDB1Q86U70 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.17□□□□□ -2.22
LDB1Q86U70 AL133373.1-201ENST00000497098 94 ntBASIC1.17□□□□□ -2.22
LDB1Q86U70 BX284668.6-201ENST00000606899 438 ntBASIC1.17□□□□□ -2.22
LDB1Q86U70 AL021707.8-201ENST00000609428 183 ntBASIC1.17□□□□□ -2.22
LDB1Q86U70 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.17□□□□□ -2.22
LDB1Q86U70 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
LDB1Q86U70 AC068700.1-201ENST00000565862 3754 ntBASIC1.17□□□□□ -2.22
LDB1Q86U70 RNU6-211P-201ENST00000384047 107 ntBASIC1.16□□□□□ -2.22
LDB1Q86U70 Y_RNA.461-201ENST00000384263 103 ntBASIC1.16□□□□□ -2.22
LDB1Q86U70 MIR222-201ENST00000384992 110 ntBASIC1.16□□□□□ -2.22
LDB1Q86U70 MIR618-201ENST00000385287 98 ntBASIC1.16□□□□□ -2.22
LDB1Q86U70 MIR526A2-201ENST00000390198 65 ntBASIC1.16□□□□□ -2.22
LDB1Q86U70 RNU6-910P-201ENST00000390844 107 ntBASIC1.16□□□□□ -2.22
LDB1Q86U70 AL603910.2-201ENST00000407268 136 ntBASIC1.16□□□□□ -2.22
LDB1Q86U70 AC005840.1-201ENST00000498412 377 ntBASIC1.16□□□□□ -2.22
LDB1Q86U70 TRMT112P2-201ENST00000512910 132 ntBASIC1.16□□□□□ -2.22
LDB1Q86U70 RNU6-830P-201ENST00000516353 107 ntBASIC1.16□□□□□ -2.22
LDB1Q86U70 MIR4764-201ENST00000580680 88 ntBASIC1.16□□□□□ -2.22
LDB1Q86U70 MIR3192-201ENST00000584920 77 ntBASIC1.16□□□□□ -2.22
LDB1Q86U70 MIR4719-201ENST00000585233 84 ntBASIC1.16□□□□□ -2.22
LDB1Q86U70 AC136443.5-201ENST00000603741 370 ntBASIC1.16□□□□□ -2.22
LDB1Q86U70 MIR6078-201ENST00000611069 100 ntBASIC1.16□□□□□ -2.22
LDB1Q86U70 AC006441.5-201ENST00000612680 209 ntBASIC1.16□□□□□ -2.22
LDB1Q86U70 Y_RNA.802-201ENST00000614892 130 ntBASIC1.16□□□□□ -2.22
LDB1Q86U70 Pinc.1-201ENST00000616452 154 ntBASIC1.16□□□□□ -2.22
LDB1Q86U70 uc_338.4-201ENST00000616635 176 ntBASIC1.16□□□□□ -2.22
LDB1Q86U70 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
LDB1Q86U70 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
LDB1Q86U70 Y_RNA.459-201ENST00000384251 102 ntBASIC1.15□□□□□ -2.23
LDB1Q86U70 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.15□□□□□ -2.23
LDB1Q86U70 RN7SKP179-201ENST00000516126 217 ntBASIC1.15□□□□□ -2.23
LDB1Q86U70 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.15□□□□□ -2.23
LDB1Q86U70 AC006006.1-201ENST00000603082 144 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms