Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 MTND1P7-201ENST00000632801 297 ntBASIC2.31□□□□□ -2.04
DDX53Q86TM3 MIR3658-201ENST00000636291 56 ntBASIC2.31□□□□□ -2.04
DDX53Q86TM3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
DDX53Q86TM3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
DDX53Q86TM3 RNU6-151P-201ENST00000364158 107 ntBASIC2.3□□□□□ -2.04
DDX53Q86TM3 RNU6-818P-201ENST00000364837 108 ntBASIC2.3□□□□□ -2.04
DDX53Q86TM3 snoU2-30.1-201ENST00000365012 70 ntBASIC2.3□□□□□ -2.04
DDX53Q86TM3 SNORA48.3-201ENST00000391081 134 ntBASIC2.3□□□□□ -2.04
DDX53Q86TM3 SNORD45.4-201ENST00000516629 73 ntBASIC2.3□□□□□ -2.04
DDX53Q86TM3 RNA5SP82-201ENST00000516707 92 ntBASIC2.3□□□□□ -2.04
DDX53Q86TM3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.3□□□□□ -2.04
DDX53Q86TM3 MIRLET7C-201ENST00000362160 84 ntBASIC2.29□□□□□ -2.04
DDX53Q86TM3 SNORD14E-201ENST00000364009 85 ntBASIC2.29□□□□□ -2.04
DDX53Q86TM3 Y_RNA.338-201ENST00000365320 114 ntBASIC2.29□□□□□ -2.04
DDX53Q86TM3 RNU6-187P-201ENST00000384139 106 ntBASIC2.29□□□□□ -2.04
DDX53Q86TM3 RNU6-163P-201ENST00000384396 106 ntBASIC2.29□□□□□ -2.04
DDX53Q86TM3 RNU6-768P-201ENST00000384683 107 ntBASIC2.29□□□□□ -2.04
DDX53Q86TM3 U8.16-201ENST00000391279 133 ntBASIC2.29□□□□□ -2.04
DDX53Q86TM3 SNORA26-201ENST00000391286 122 ntBASIC2.29□□□□□ -2.04
DDX53Q86TM3 AL445646.1-201ENST00000431784 216 ntBASIC2.29□□□□□ -2.04
DDX53Q86TM3 AC114811.1-201ENST00000507207 168 ntBASIC2.29□□□□□ -2.04
DDX53Q86TM3 RNU6-126P-201ENST00000516685 103 ntBASIC2.29□□□□□ -2.04
DDX53Q86TM3 RNU6-365P-201ENST00000517113 106 ntBASIC2.29□□□□□ -2.04
DDX53Q86TM3 DNAJC19P2-201ENST00000593340 302 ntBASIC2.29□□□□□ -2.04
DDX53Q86TM3 AC120024.3-201ENST00000603167 156 ntBASIC2.29□□□□□ -2.04
DDX53Q86TM3 Y_RNA.778-201ENST00000620203 90 ntBASIC2.29□□□□□ -2.04
DDX53Q86TM3 ZNF355P-201ENST00000427301 3216 ntBASIC2.29□□□□□ -2.04
DDX53Q86TM3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.29□□□□□ -2.04
DDX53Q86TM3 RNY1P5-201ENST00000383890 115 ntBASIC2.28□□□□□ -2.04
DDX53Q86TM3 SNORD116-25-201ENST00000516517 92 ntBASIC2.28□□□□□ -2.04
DDX53Q86TM3 RNA5SP168-201ENST00000516642 112 ntBASIC2.28□□□□□ -2.04
DDX53Q86TM3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.28□□□□□ -2.04
DDX53Q86TM3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
DDX53Q86TM3 AC097639.2-201ENST00000603159 172 ntBASIC2.28□□□□□ -2.04
DDX53Q86TM3 AC021506.2-201ENST00000612354 169 ntBASIC2.28□□□□□ -2.04
DDX53Q86TM3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
DDX53Q86TM3 Y_RNA.242-201ENST00000364473 110 ntBASIC2.27□□□□□ -2.05
DDX53Q86TM3 Y_RNA.393-201ENST00000383936 102 ntBASIC2.27□□□□□ -2.05
DDX53Q86TM3 RNU6-442P-201ENST00000383968 104 ntBASIC2.27□□□□□ -2.05
DDX53Q86TM3 RNU6-424P-201ENST00000384367 105 ntBASIC2.27□□□□□ -2.05
DDX53Q86TM3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.27□□□□□ -2.05
DDX53Q86TM3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.27□□□□□ -2.05
DDX53Q86TM3 HMGN2P23-201ENST00000456759 269 ntBASIC2.27□□□□□ -2.05
DDX53Q86TM3 CYCTP-201ENST00000504253 315 ntBASIC2.27□□□□□ -2.05
DDX53Q86TM3 Y_RNA.666-201ENST00000516187 112 ntBASIC2.27□□□□□ -2.05
DDX53Q86TM3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
DDX53Q86TM3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
DDX53Q86TM3 Y_RNA.226-201ENST00000364337 114 ntBASIC2.26□□□□□ -2.05
DDX53Q86TM3 RNU6-978P-201ENST00000364371 103 ntBASIC2.26□□□□□ -2.05
DDX53Q86TM3 RNU4-11P-201ENST00000365287 132 ntBASIC2.26□□□□□ -2.05
DDX53Q86TM3 Y_RNA.400-201ENST00000383963 111 ntBASIC2.26□□□□□ -2.05
DDX53Q86TM3 U8.13-201ENST00000390842 128 ntBASIC2.26□□□□□ -2.05
DDX53Q86TM3 SNORD37.2-201ENST00000391075 66 ntBASIC2.26□□□□□ -2.05
DDX53Q86TM3 AC099513.1-201ENST00000490423 301 ntBASIC2.26□□□□□ -2.05
DDX53Q86TM3 MIR4287-201ENST00000579398 78 ntBASIC2.26□□□□□ -2.05
DDX53Q86TM3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.25□□□□□ -2.05
DDX53Q86TM3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
DDX53Q86TM3 Y_RNA.66-201ENST00000362862 102 ntBASIC2.25□□□□□ -2.05
DDX53Q86TM3 SNORA26.9-201ENST00000391322 122 ntBASIC2.25□□□□□ -2.05
DDX53Q86TM3 CYCSP49-201ENST00000420810 319 ntBASIC2.25□□□□□ -2.05
DDX53Q86TM3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.25□□□□□ -2.05
DDX53Q86TM3 RNU6-504P-201ENST00000516568 104 ntBASIC2.25□□□□□ -2.05
DDX53Q86TM3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.25□□□□□ -2.05
DDX53Q86TM3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.25□□□□□ -2.05
DDX53Q86TM3 MIR6844-201ENST00000637122 62 ntBASIC2.25□□□□□ -2.05
DDX53Q86TM3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
DDX53Q86TM3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.24□□□□□ -2.05
DDX53Q86TM3 Y_RNA.336-201ENST00000365307 109 ntBASIC2.24□□□□□ -2.05
DDX53Q86TM3 SNORA6-201ENST00000384033 151 ntBASIC2.24□□□□□ -2.05
DDX53Q86TM3 SNORD61-201ENST00000384252 73 ntBASIC2.24□□□□□ -2.05
DDX53Q86TM3 RNA5SP212-201ENST00000391223 107 ntBASIC2.24□□□□□ -2.05
DDX53Q86TM3 RPL30P13-201ENST00000418873 348 ntBASIC2.24□□□□□ -2.05
DDX53Q86TM3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.24□□□□□ -2.05
DDX53Q86TM3 HMGN2P32-201ENST00000444648 269 ntBASIC2.24□□□□□ -2.05
DDX53Q86TM3 RNU7-12P-201ENST00000516030 62 ntBASIC2.24□□□□□ -2.05
DDX53Q86TM3 RNU6-295P-201ENST00000516901 104 ntBASIC2.24□□□□□ -2.05
DDX53Q86TM3 RNU6-1270P-201ENST00000517128 108 ntBASIC2.24□□□□□ -2.05
DDX53Q86TM3 IGLV3-17-201ENST00000519099 244 ntBASIC2.24□□□□□ -2.05
DDX53Q86TM3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.24□□□□□ -2.05
DDX53Q86TM3 AL773524.1-201ENST00000614065 229 ntBASIC2.24□□□□□ -2.05
DDX53Q86TM3 AC027279.3-201ENST00000625055 122 ntBASIC2.24□□□□□ -2.05
DDX53Q86TM3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
DDX53Q86TM3 AC005336.3-201ENST00000623833 2679 ntBASIC2.23□□□□□ -2.05
DDX53Q86TM3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.23□□□□□ -2.05
DDX53Q86TM3 RNU6-199P-201ENST00000362954 107 ntBASIC2.23□□□□□ -2.05
DDX53Q86TM3 RNU6-268P-201ENST00000364174 107 ntBASIC2.23□□□□□ -2.05
DDX53Q86TM3 Y_RNA.215-201ENST00000364204 112 ntBASIC2.23□□□□□ -2.05
DDX53Q86TM3 RNU6-597P-201ENST00000365620 102 ntBASIC2.23□□□□□ -2.05
DDX53Q86TM3 RNU6-1336P-201ENST00000383886 109 ntBASIC2.23□□□□□ -2.05
DDX53Q86TM3 RNU6-360P-201ENST00000390944 104 ntBASIC2.23□□□□□ -2.05
DDX53Q86TM3 SNRPGP14-201ENST00000435400 219 ntBASIC2.23□□□□□ -2.05
DDX53Q86TM3 SNRPGP13-201ENST00000442212 177 ntBASIC2.23□□□□□ -2.05
DDX53Q86TM3 AC007751.1-201ENST00000529260 376 ntBASIC2.23□□□□□ -2.05
DDX53Q86TM3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.23□□□□□ -2.05
DDX53Q86TM3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
DDX53Q86TM3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
DDX53Q86TM3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.22□□□□□ -2.05
DDX53Q86TM3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
DDX53Q86TM3 AC008555.8-201ENST00000623602 2168 ntBASIC2.22□□□□□ -2.05
DDX53Q86TM3 Y_RNA.488-201ENST00000384403 102 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 187 ms