Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 Y_RNA.302-201ENST00000364997 102 ntBASIC-0.68□□□□□ -2.52
CSMD3Q7Z407 MIR6082-201ENST00000613604 109 ntBASIC-0.68□□□□□ -2.52
CSMD3Q7Z407 SNORD115-34-201ENST00000362441 82 ntBASIC-0.68□□□□□ -2.52
CSMD3Q7Z407 SNORD115-12-201ENST00000362583 82 ntBASIC-0.68□□□□□ -2.52
CSMD3Q7Z407 SNORD115-29-201ENST00000362834 82 ntBASIC-0.68□□□□□ -2.52
CSMD3Q7Z407 SNORD115-9-201ENST00000362912 82 ntBASIC-0.68□□□□□ -2.52
CSMD3Q7Z407 SNORD115-21-201ENST00000362963 81 ntBASIC-0.68□□□□□ -2.52
CSMD3Q7Z407 SNORD115-14-201ENST00000363090 81 ntBASIC-0.68□□□□□ -2.52
CSMD3Q7Z407 SNORD115-13-201ENST00000363358 82 ntBASIC-0.68□□□□□ -2.52
CSMD3Q7Z407 SNORD115-11-201ENST00000363616 82 ntBASIC-0.68□□□□□ -2.52
CSMD3Q7Z407 SNORD115-5-201ENST00000363633 82 ntBASIC-0.68□□□□□ -2.52
CSMD3Q7Z407 SNORD115-39-201ENST00000363694 82 ntBASIC-0.68□□□□□ -2.52
CSMD3Q7Z407 SNORD115-4-201ENST00000363810 82 ntBASIC-0.68□□□□□ -2.52
CSMD3Q7Z407 SNORD115-16-201ENST00000363887 82 ntBASIC-0.68□□□□□ -2.52
CSMD3Q7Z407 SNORD115-6-201ENST00000363942 82 ntBASIC-0.68□□□□□ -2.52
CSMD3Q7Z407 SNORD115-42-201ENST00000364273 82 ntBASIC-0.68□□□□□ -2.52
CSMD3Q7Z407 SNORD115-15-201ENST00000364809 81 ntBASIC-0.68□□□□□ -2.52
CSMD3Q7Z407 SNORD115-1-201ENST00000364961 82 ntBASIC-0.68□□□□□ -2.52
CSMD3Q7Z407 SNORD115-26-201ENST00000365067 82 ntBASIC-0.68□□□□□ -2.52
CSMD3Q7Z407 SNORD115-10-201ENST00000365073 81 ntBASIC-0.68□□□□□ -2.52
CSMD3Q7Z407 SNORD115-43-201ENST00000365503 82 ntBASIC-0.68□□□□□ -2.52
CSMD3Q7Z407 SNORD115-36-201ENST00000365629 82 ntBASIC-0.68□□□□□ -2.52
CSMD3Q7Z407 MIR124-2-201ENST00000385081 109 ntBASIC-0.68□□□□□ -2.52
CSMD3Q7Z407 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.68□□□□□ -2.52
CSMD3Q7Z407 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.68□□□□□ -2.52
CSMD3Q7Z407 RNU6-1114P-201ENST00000516022 107 ntBASIC-0.68□□□□□ -2.52
CSMD3Q7Z407 snoU83B.1-201ENST00000517136 88 ntBASIC-0.68□□□□□ -2.52
CSMD3Q7Z407 AC022616.6-201ENST00000520479 119 ntBASIC-0.68□□□□□ -2.52
CSMD3Q7Z407 SNORD115-40-201ENST00000606510 82 ntBASIC-0.68□□□□□ -2.52
CSMD3Q7Z407 AL121895.2-201ENST00000619558 447 ntBASIC-0.68□□□□□ -2.52
CSMD3Q7Z407 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.69□□□□□ -2.52
CSMD3Q7Z407 SNRPGP10-201ENST00000432323 225 ntBASIC-0.69□□□□□ -2.52
CSMD3Q7Z407 AL500527.2-201ENST00000454105 95 ntBASIC-0.69□□□□□ -2.52
CSMD3Q7Z407 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.69□□□□□ -2.52
CSMD3Q7Z407 AC090616.2-202ENST00000584248 222 ntBASIC-0.69□□□□□ -2.52
CSMD3Q7Z407 JPX_2.1-201ENST00000614161 69 ntBASIC-0.69□□□□□ -2.52
CSMD3Q7Z407 MIR8066-201ENST00000617280 78 ntBASIC-0.69□□□□□ -2.52
CSMD3Q7Z407 AL512427.1-201ENST00000618593 349 ntBASIC-0.69□□□□□ -2.52
CSMD3Q7Z407 RNA5SP93-201ENST00000362525 114 ntBASIC-0.69□□□□□ -2.52
CSMD3Q7Z407 RNU6-226P-201ENST00000363778 107 ntBASIC-0.69□□□□□ -2.52
CSMD3Q7Z407 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.69□□□□□ -2.52
CSMD3Q7Z407 AP003181.2-201ENST00000528941 181 ntBASIC-0.69□□□□□ -2.52
CSMD3Q7Z407 POLR3GP2-201ENST00000588366 668 ntBASIC-0.69□□□□□ -2.52
CSMD3Q7Z407 AC005972.2-201ENST00000604690 348 ntBASIC-0.69□□□□□ -2.52
CSMD3Q7Z407 uc_338.10-201ENST00000621872 182 ntBASIC-0.69□□□□□ -2.52
CSMD3Q7Z407 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-0.69□□□□□ -2.52
CSMD3Q7Z407 SNORD116-9-201ENST00000384000 95 ntBASIC-0.69□□□□□ -2.52
CSMD3Q7Z407 SNORD116-3-201ENST00000384287 95 ntBASIC-0.69□□□□□ -2.52
CSMD3Q7Z407 SNORD116-8-201ENST00000384365 95 ntBASIC-0.69□□□□□ -2.52
CSMD3Q7Z407 SNORD116-7-201ENST00000384404 95 ntBASIC-0.69□□□□□ -2.52
CSMD3Q7Z407 SNORD116-5-201ENST00000384462 95 ntBASIC-0.69□□□□□ -2.52
CSMD3Q7Z407 RNU6-1127P-201ENST00000384580 107 ntBASIC-0.69□□□□□ -2.52
CSMD3Q7Z407 Y_RNA.582-201ENST00000391023 95 ntBASIC-0.69□□□□□ -2.52
CSMD3Q7Z407 RNU6-765P-201ENST00000516916 99 ntBASIC-0.69□□□□□ -2.52
CSMD3Q7Z407 CLPTM1LP1-201ENST00000604519 484 ntBASIC-0.69□□□□□ -2.52
CSMD3Q7Z407 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.7□□□□□ -2.52
CSMD3Q7Z407 SNORD114-7-201ENST00000362520 77 ntBASIC-0.7□□□□□ -2.52
CSMD3Q7Z407 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.7□□□□□ -2.52
CSMD3Q7Z407 MIR588-201ENST00000384900 83 ntBASIC-0.7□□□□□ -2.52
CSMD3Q7Z407 MIR518F-201ENST00000384973 87 ntBASIC-0.7□□□□□ -2.52
CSMD3Q7Z407 PRDX4P1-201ENST00000507189 574 ntBASIC-0.7□□□□□ -2.52
CSMD3Q7Z407 AGGF1P4-201ENST00000568249 801 ntBASIC-0.7□□□□□ -2.52
CSMD3Q7Z407 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.7□□□□□ -2.52
CSMD3Q7Z407 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-0.7□□□□□ -2.52
CSMD3Q7Z407 RNU7-175P-201ENST00000515915 61 ntBASIC-0.7□□□□□ -2.52
CSMD3Q7Z407 AC091144.1-201ENST00000519573 138 ntBASIC-0.7□□□□□ -2.52
CSMD3Q7Z407 AL136370.1-201ENST00000608166 691 ntBASIC-0.7□□□□□ -2.52
CSMD3Q7Z407 HULC.1-201ENST00000612720 240 ntBASIC-0.7□□□□□ -2.52
CSMD3Q7Z407 AP002371.2-201ENST00000624450 503 ntBASIC-0.7□□□□□ -2.52
CSMD3Q7Z407 RNU6-1287P-201ENST00000362914 107 ntBASIC-0.71□□□□□ -2.52
CSMD3Q7Z407 RNU6-1060P-201ENST00000384664 107 ntBASIC-0.71□□□□□ -2.52
CSMD3Q7Z407 MIR487A-201ENST00000385009 80 ntBASIC-0.71□□□□□ -2.52
CSMD3Q7Z407 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.71□□□□□ -2.52
CSMD3Q7Z407 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-0.71□□□□□ -2.52
CSMD3Q7Z407 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-0.71□□□□□ -2.52
CSMD3Q7Z407 AC245014.2-201ENST00000603689 287 ntBASIC-0.71□□□□□ -2.52
CSMD3Q7Z407 RNU1-29P-201ENST00000606574 126 ntBASIC-0.71□□□□□ -2.52
CSMD3Q7Z407 SNORD115-30-201ENST00000364117 82 ntBASIC-0.71□□□□□ -2.52
CSMD3Q7Z407 MTND3P23-201ENST00000431980 347 ntBASIC-0.71□□□□□ -2.52
CSMD3Q7Z407 RNU6-329P-201ENST00000459618 107 ntBASIC-0.71□□□□□ -2.52
CSMD3Q7Z407 RNA5SP169-201ENST00000517268 117 ntBASIC-0.71□□□□□ -2.52
CSMD3Q7Z407 AP003733.2-201ENST00000529409 171 ntBASIC-0.71□□□□□ -2.52
CSMD3Q7Z407 RNU4-28P-201ENST00000364739 141 ntBASIC-0.71□□□□□ -2.52
CSMD3Q7Z407 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.71□□□□□ -2.52
CSMD3Q7Z407 MIR517B-201ENST00000385102 67 ntBASIC-0.71□□□□□ -2.52
CSMD3Q7Z407 U8.15-201ENST00000390947 134 ntBASIC-0.71□□□□□ -2.52
CSMD3Q7Z407 RNA5SP261-201ENST00000410536 106 ntBASIC-0.71□□□□□ -2.52
CSMD3Q7Z407 AL359672.1-201ENST00000442302 409 ntBASIC-0.71□□□□□ -2.52
CSMD3Q7Z407 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-0.71□□□□□ -2.52
CSMD3Q7Z407 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.71□□□□□ -2.52
CSMD3Q7Z407 SCARNA24.1-201ENST00000516465 137 ntBASIC-0.71□□□□□ -2.52
CSMD3Q7Z407 RNA5SP33-201ENST00000516687 98 ntBASIC-0.71□□□□□ -2.52
CSMD3Q7Z407 RNU7-53P-201ENST00000516705 60 ntBASIC-0.71□□□□□ -2.52
CSMD3Q7Z407 AL353803.5-201ENST00000599815 141 ntBASIC-0.71□□□□□ -2.52
CSMD3Q7Z407 AC073648.5-201ENST00000603502 305 ntBASIC-0.71□□□□□ -2.52
CSMD3Q7Z407 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.72□□□□□ -2.52
CSMD3Q7Z407 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.72□□□□□ -2.52
CSMD3Q7Z407 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.72□□□□□ -2.52
CSMD3Q7Z407 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.72□□□□□ -2.52
CSMD3Q7Z407 RNU6-455P-201ENST00000384681 107 ntBASIC-0.72□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 183.8 ms