Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 uc_338.20-201ENST00000621563 178 ntBASIC1.85□□□□□ -2.11
PTCHD4Q6ZW05 MIR3658-201ENST00000636291 56 ntBASIC1.85□□□□□ -2.11
PTCHD4Q6ZW05 ICE2P2-201ENST00000483823 2787 ntBASIC1.84□□□□□ -2.11
PTCHD4Q6ZW05 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
PTCHD4Q6ZW05 Y_RNA.521-201ENST00000384560 114 ntBASIC1.84□□□□□ -2.11
PTCHD4Q6ZW05 SNORA26-201ENST00000391286 122 ntBASIC1.84□□□□□ -2.11
PTCHD4Q6ZW05 AL023284.1-201ENST00000403956 276 ntBASIC1.84□□□□□ -2.11
PTCHD4Q6ZW05 CYCTP-201ENST00000504253 315 ntBASIC1.84□□□□□ -2.11
PTCHD4Q6ZW05 RNU6-126P-201ENST00000516685 103 ntBASIC1.84□□□□□ -2.11
PTCHD4Q6ZW05 RNU6-365P-201ENST00000517113 106 ntBASIC1.84□□□□□ -2.11
PTCHD4Q6ZW05 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.84□□□□□ -2.11
PTCHD4Q6ZW05 MIR3133-201ENST00000583157 78 ntBASIC1.84□□□□□ -2.11
PTCHD4Q6ZW05 AC097639.2-201ENST00000603159 172 ntBASIC1.84□□□□□ -2.11
PTCHD4Q6ZW05 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
PTCHD4Q6ZW05 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.84□□□□□ -2.12
PTCHD4Q6ZW05 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
PTCHD4Q6ZW05 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
PTCHD4Q6ZW05 RNU6-151P-201ENST00000364158 107 ntBASIC1.83□□□□□ -2.12
PTCHD4Q6ZW05 Y_RNA.242-201ENST00000364473 110 ntBASIC1.83□□□□□ -2.12
PTCHD4Q6ZW05 RNU6-818P-201ENST00000364837 108 ntBASIC1.83□□□□□ -2.12
PTCHD4Q6ZW05 RNU6-442P-201ENST00000383968 104 ntBASIC1.83□□□□□ -2.12
PTCHD4Q6ZW05 RNU6-746P-201ENST00000384112 109 ntBASIC1.83□□□□□ -2.12
PTCHD4Q6ZW05 RNU6-125P-201ENST00000384505 107 ntBASIC1.83□□□□□ -2.12
PTCHD4Q6ZW05 RNU6-768P-201ENST00000384683 107 ntBASIC1.83□□□□□ -2.12
PTCHD4Q6ZW05 RNU6-360P-201ENST00000390944 104 ntBASIC1.83□□□□□ -2.12
PTCHD4Q6ZW05 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.83□□□□□ -2.12
PTCHD4Q6ZW05 Y_RNA.666-201ENST00000516187 112 ntBASIC1.83□□□□□ -2.12
PTCHD4Q6ZW05 RNU6-346P-201ENST00000516288 111 ntBASIC1.83□□□□□ -2.12
PTCHD4Q6ZW05 DNAJC19P2-201ENST00000593340 302 ntBASIC1.83□□□□□ -2.12
PTCHD4Q6ZW05 MIR6873-201ENST00000622788 63 ntBASIC1.83□□□□□ -2.12
PTCHD4Q6ZW05 MTND1P7-201ENST00000632801 297 ntBASIC1.83□□□□□ -2.12
PTCHD4Q6ZW05 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
PTCHD4Q6ZW05 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
PTCHD4Q6ZW05 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
PTCHD4Q6ZW05 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
PTCHD4Q6ZW05 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.82□□□□□ -2.12
PTCHD4Q6ZW05 RNU4-82P-201ENST00000362443 140 ntBASIC1.82□□□□□ -2.12
PTCHD4Q6ZW05 Y_RNA.66-201ENST00000362862 102 ntBASIC1.82□□□□□ -2.12
PTCHD4Q6ZW05 RNU6-978P-201ENST00000364371 103 ntBASIC1.82□□□□□ -2.12
PTCHD4Q6ZW05 RPL30P13-201ENST00000418873 348 ntBASIC1.82□□□□□ -2.12
PTCHD4Q6ZW05 RNU7-12P-201ENST00000516030 62 ntBASIC1.82□□□□□ -2.12
PTCHD4Q6ZW05 SNORD116-25-201ENST00000516517 92 ntBASIC1.82□□□□□ -2.12
PTCHD4Q6ZW05 IGKV3-31-201ENST00000523109 329 ntBASIC1.82□□□□□ -2.12
PTCHD4Q6ZW05 AC022254.1-201ENST00000567857 235 ntBASIC1.82□□□□□ -2.12
PTCHD4Q6ZW05 Y_RNA.778-201ENST00000620203 90 ntBASIC1.82□□□□□ -2.12
PTCHD4Q6ZW05 AC027279.3-201ENST00000625055 122 ntBASIC1.82□□□□□ -2.12
PTCHD4Q6ZW05 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
PTCHD4Q6ZW05 Y_RNA.336-201ENST00000365307 109 ntBASIC1.81□□□□□ -2.12
PTCHD4Q6ZW05 RNY1P5-201ENST00000383890 115 ntBASIC1.81□□□□□ -2.12
PTCHD4Q6ZW05 Y_RNA.393-201ENST00000383936 102 ntBASIC1.81□□□□□ -2.12
PTCHD4Q6ZW05 RNU6-439P-201ENST00000384188 106 ntBASIC1.81□□□□□ -2.12
PTCHD4Q6ZW05 SNRPGP14-201ENST00000435400 219 ntBASIC1.81□□□□□ -2.12
PTCHD4Q6ZW05 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.81□□□□□ -2.12
PTCHD4Q6ZW05 HMGN2P32-201ENST00000444648 269 ntBASIC1.81□□□□□ -2.12
PTCHD4Q6ZW05 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.81□□□□□ -2.12
PTCHD4Q6ZW05 Y_RNA.703-201ENST00000516846 111 ntBASIC1.81□□□□□ -2.12
PTCHD4Q6ZW05 RNU6-1270P-201ENST00000517128 108 ntBASIC1.81□□□□□ -2.12
PTCHD4Q6ZW05 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.81□□□□□ -2.12
PTCHD4Q6ZW05 AC012493.3-201ENST00000604494 112 ntBASIC1.81□□□□□ -2.12
PTCHD4Q6ZW05 AL513423.1-201ENST00000621695 132 ntBASIC1.81□□□□□ -2.12
PTCHD4Q6ZW05 RNU6-268P-201ENST00000364174 107 ntBASIC1.8□□□□□ -2.12
PTCHD4Q6ZW05 RNU4-11P-201ENST00000365287 132 ntBASIC1.8□□□□□ -2.12
PTCHD4Q6ZW05 RNU6-203P-201ENST00000384038 104 ntBASIC1.8□□□□□ -2.12
PTCHD4Q6ZW05 RNU6-187P-201ENST00000384139 106 ntBASIC1.8□□□□□ -2.12
PTCHD4Q6ZW05 SNORD61-201ENST00000384252 73 ntBASIC1.8□□□□□ -2.12
PTCHD4Q6ZW05 SNORA67.3-201ENST00000384366 140 ntBASIC1.8□□□□□ -2.12
PTCHD4Q6ZW05 SNORA64-201ENST00000384674 134 ntBASIC1.8□□□□□ -2.12
PTCHD4Q6ZW05 MIR891A-201ENST00000401237 79 ntBASIC1.8□□□□□ -2.12
PTCHD4Q6ZW05 CYCSP49-201ENST00000420810 319 ntBASIC1.8□□□□□ -2.12
PTCHD4Q6ZW05 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.8□□□□□ -2.12
PTCHD4Q6ZW05 PGBD4P5-201ENST00000445958 426 ntBASIC1.8□□□□□ -2.12
PTCHD4Q6ZW05 AC093850.1-201ENST00000454121 251 ntBASIC1.8□□□□□ -2.12
PTCHD4Q6ZW05 RNU6-504P-201ENST00000516568 104 ntBASIC1.8□□□□□ -2.12
PTCHD4Q6ZW05 AC006441.5-201ENST00000612680 209 ntBASIC1.8□□□□□ -2.12
PTCHD4Q6ZW05 Y_RNA.783-201ENST00000613546 102 ntBASIC1.8□□□□□ -2.12
PTCHD4Q6ZW05 MIR6844-201ENST00000637122 62 ntBASIC1.8□□□□□ -2.12
PTCHD4Q6ZW05 RNU6-833P-201ENST00000363486 107 ntBASIC1.79□□□□□ -2.12
PTCHD4Q6ZW05 RNU6-597P-201ENST00000365620 102 ntBASIC1.79□□□□□ -2.12
PTCHD4Q6ZW05 RNU6-1336P-201ENST00000383886 109 ntBASIC1.79□□□□□ -2.12
PTCHD4Q6ZW05 Y_RNA.400-201ENST00000383963 111 ntBASIC1.79□□□□□ -2.12
PTCHD4Q6ZW05 MIR660-201ENST00000385235 97 ntBASIC1.79□□□□□ -2.12
PTCHD4Q6ZW05 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
PTCHD4Q6ZW05 SNORD37.2-201ENST00000391075 66 ntBASIC1.79□□□□□ -2.12
PTCHD4Q6ZW05 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.79□□□□□ -2.12
PTCHD4Q6ZW05 SNRPGP13-201ENST00000442212 177 ntBASIC1.79□□□□□ -2.12
PTCHD4Q6ZW05 AC008834.1-201ENST00000511612 175 ntBASIC1.79□□□□□ -2.12
PTCHD4Q6ZW05 RNU6-693P-201ENST00000516134 107 ntBASIC1.79□□□□□ -2.12
PTCHD4Q6ZW05 AC007751.1-201ENST00000529260 376 ntBASIC1.79□□□□□ -2.12
PTCHD4Q6ZW05 MIR4778-201ENST00000577635 80 ntBASIC1.79□□□□□ -2.12
PTCHD4Q6ZW05 MIR5089-201ENST00000580047 84 ntBASIC1.79□□□□□ -2.12
PTCHD4Q6ZW05 SNORD3E-202ENST00000627253 216 ntBASIC1.79□□□□□ -2.12
PTCHD4Q6ZW05 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.79□□□□□ -2.12
PTCHD4Q6ZW05 RNU6-199P-201ENST00000362954 107 ntBASIC1.78□□□□□ -2.12
PTCHD4Q6ZW05 SNORD24-201ENST00000383884 75 ntBASIC1.78□□□□□ -2.12
PTCHD4Q6ZW05 MIR548A2-201ENST00000384956 97 ntBASIC1.78□□□□□ -2.12
PTCHD4Q6ZW05 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
PTCHD4Q6ZW05 MIR548O-201ENST00000408583 114 ntBASIC1.78□□□□□ -2.12
PTCHD4Q6ZW05 AL356320.1-201ENST00000429616 163 ntBASIC1.78□□□□□ -2.12
PTCHD4Q6ZW05 SNORA44.1-201ENST00000517031 108 ntBASIC1.78□□□□□ -2.12
PTCHD4Q6ZW05 SNRPGP19-201ENST00000603826 189 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 214.7 ms