Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 UBE2WP1-201ENST00000362030 340 ntBASIC1.09□□□□□ -2.23
RFWD3Q6PCD5 RNU6-238P-201ENST00000363313 106 ntBASIC1.09□□□□□ -2.23
RFWD3Q6PCD5 RNU6-1209P-201ENST00000363655 107 ntBASIC1.09□□□□□ -2.23
RFWD3Q6PCD5 Y_RNA.217-201ENST00000364214 105 ntBASIC1.09□□□□□ -2.23
RFWD3Q6PCD5 snoU2-30.1-201ENST00000365012 70 ntBASIC1.09□□□□□ -2.23
RFWD3Q6PCD5 Y_RNA.574-201ENST00000384766 95 ntBASIC1.09□□□□□ -2.23
RFWD3Q6PCD5 MIR452-201ENST00000385020 85 ntBASIC1.09□□□□□ -2.23
RFWD3Q6PCD5 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
RFWD3Q6PCD5 AL451046.2-201ENST00000403074 277 ntBASIC1.09□□□□□ -2.23
RFWD3Q6PCD5 Y_RNA.641-201ENST00000459414 105 ntBASIC1.09□□□□□ -2.23
RFWD3Q6PCD5 OR2A41P-201ENST00000473586 105 ntBASIC1.09□□□□□ -2.23
RFWD3Q6PCD5 TRBVB-201ENST00000477100 408 ntBASIC1.09□□□□□ -2.23
RFWD3Q6PCD5 SNORD45.4-201ENST00000516629 73 ntBASIC1.09□□□□□ -2.23
RFWD3Q6PCD5 RNU6-922P-201ENST00000516753 99 ntBASIC1.09□□□□□ -2.23
RFWD3Q6PCD5 AL117187.1-201ENST00000555482 181 ntBASIC1.09□□□□□ -2.23
RFWD3Q6PCD5 CYP3A52P-201ENST00000563326 91 ntBASIC1.09□□□□□ -2.23
RFWD3Q6PCD5 AC087685.1-201ENST00000587507 141 ntBASIC1.09□□□□□ -2.23
RFWD3Q6PCD5 GHRLOS.1-201ENST00000610995 70 ntBASIC1.09□□□□□ -2.23
RFWD3Q6PCD5 AC013791.1-201ENST00000616619 62 ntBASIC1.09□□□□□ -2.23
RFWD3Q6PCD5 AC007742.2-201ENST00000618226 398 ntBASIC1.09□□□□□ -2.23
RFWD3Q6PCD5 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
RFWD3Q6PCD5 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
RFWD3Q6PCD5 Y_RNA.796-201ENST00000364268 102 ntBASIC1.08□□□□□ -2.24
RFWD3Q6PCD5 Y_RNA.799-201ENST00000364992 102 ntBASIC1.08□□□□□ -2.24
RFWD3Q6PCD5 Y_RNA.376-201ENST00000365638 108 ntBASIC1.08□□□□□ -2.24
RFWD3Q6PCD5 RNU6-662P-201ENST00000384253 104 ntBASIC1.08□□□□□ -2.24
RFWD3Q6PCD5 Y_RNA.512-201ENST00000384518 102 ntBASIC1.08□□□□□ -2.24
RFWD3Q6PCD5 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.08□□□□□ -2.24
RFWD3Q6PCD5 HMGN2P32-201ENST00000444648 269 ntBASIC1.08□□□□□ -2.24
RFWD3Q6PCD5 SCARNA24.2-201ENST00000516968 130 ntBASIC1.08□□□□□ -2.24
RFWD3Q6PCD5 AP001282.2-201ENST00000616149 309 ntBASIC1.08□□□□□ -2.24
RFWD3Q6PCD5 MIR8062-201ENST00000621515 85 ntBASIC1.08□□□□□ -2.24
RFWD3Q6PCD5 U6.104-201ENST00000637979 90 ntBASIC1.08□□□□□ -2.24
RFWD3Q6PCD5 RNU6-1205P-201ENST00000363625 106 ntBASIC1.07□□□□□ -2.24
RFWD3Q6PCD5 Y_RNA.176-201ENST00000363815 109 ntBASIC1.07□□□□□ -2.24
RFWD3Q6PCD5 SNORD50B-201ENST00000364995 70 ntBASIC1.07□□□□□ -2.24
RFWD3Q6PCD5 Y_RNA.459-201ENST00000384251 102 ntBASIC1.07□□□□□ -2.24
RFWD3Q6PCD5 MIR526A1-201ENST00000384897 85 ntBASIC1.07□□□□□ -2.24
RFWD3Q6PCD5 SNORD41-201ENST00000386967 70 ntBASIC1.07□□□□□ -2.24
RFWD3Q6PCD5 AL078595.1-201ENST00000404458 226 ntBASIC1.07□□□□□ -2.24
RFWD3Q6PCD5 MIR1302-6-201ENST00000408466 90 ntBASIC1.07□□□□□ -2.24
RFWD3Q6PCD5 MIR1298-201ENST00000408783 112 ntBASIC1.07□□□□□ -2.24
RFWD3Q6PCD5 BTF3P11-201ENST00000426582 477 ntBASIC1.07□□□□□ -2.24
RFWD3Q6PCD5 DEFB108E-201ENST00000524692 240 ntBASIC1.07□□□□□ -2.24
RFWD3Q6PCD5 MIR5692C2-201ENST00000577959 77 ntBASIC1.07□□□□□ -2.24
RFWD3Q6PCD5 AC136443.5-201ENST00000603741 370 ntBASIC1.07□□□□□ -2.24
RFWD3Q6PCD5 AL360085.1-201ENST00000604713 532 ntBASIC1.07□□□□□ -2.24
RFWD3Q6PCD5 MIR6504-201ENST00000613520 61 ntBASIC1.07□□□□□ -2.24
RFWD3Q6PCD5 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.07□□□□□ -2.24
RFWD3Q6PCD5 MIR6767-201ENST00000637302 66 ntBASIC1.07□□□□□ -2.24
RFWD3Q6PCD5 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
RFWD3Q6PCD5 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.07□□□□□ -2.24
RFWD3Q6PCD5 RNA5SP327-201ENST00000362494 101 ntBASIC1.06□□□□□ -2.24
RFWD3Q6PCD5 Y_RNA.237-201ENST00000364439 102 ntBASIC1.06□□□□□ -2.24
RFWD3Q6PCD5 Y_RNA.269-201ENST00000364685 89 ntBASIC1.06□□□□□ -2.24
RFWD3Q6PCD5 Y_RNA.336-201ENST00000365307 109 ntBASIC1.06□□□□□ -2.24
RFWD3Q6PCD5 SNORD114-22-201ENST00000365423 72 ntBASIC1.06□□□□□ -2.24
RFWD3Q6PCD5 RPS29P28-201ENST00000446439 141 ntBASIC1.06□□□□□ -2.24
RFWD3Q6PCD5 NDUFA4P2-201ENST00000489989 244 ntBASIC1.06□□□□□ -2.24
RFWD3Q6PCD5 AL133373.1-201ENST00000497098 94 ntBASIC1.06□□□□□ -2.24
RFWD3Q6PCD5 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.06□□□□□ -2.24
RFWD3Q6PCD5 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.06□□□□□ -2.24
RFWD3Q6PCD5 RN7SKP88-201ENST00000516847 250 ntBASIC1.06□□□□□ -2.24
RFWD3Q6PCD5 RNU6-165P-201ENST00000517170 99 ntBASIC1.06□□□□□ -2.24
RFWD3Q6PCD5 RPL23AP91-201ENST00000569211 455 ntBASIC1.06□□□□□ -2.24
RFWD3Q6PCD5 FAM106DP-201ENST00000586416 501 ntBASIC1.06□□□□□ -2.24
RFWD3Q6PCD5 AL357312.1-201ENST00000603879 298 ntBASIC1.06□□□□□ -2.24
RFWD3Q6PCD5 7SK.8-201ENST00000612110 250 ntBASIC1.06□□□□□ -2.24
RFWD3Q6PCD5 7SK.11-201ENST00000615477 250 ntBASIC1.06□□□□□ -2.24
RFWD3Q6PCD5 7SK.13-201ENST00000622040 250 ntBASIC1.06□□□□□ -2.24
RFWD3Q6PCD5 MIR335-201ENST00000362173 94 ntBASIC1.05□□□□□ -2.24
RFWD3Q6PCD5 Y_RNA.44-201ENST00000362676 108 ntBASIC1.05□□□□□ -2.24
RFWD3Q6PCD5 SNORD14E-201ENST00000364009 85 ntBASIC1.05□□□□□ -2.24
RFWD3Q6PCD5 Y_RNA.275-201ENST00000364726 110 ntBASIC1.05□□□□□ -2.24
RFWD3Q6PCD5 Y_RNA.461-201ENST00000384263 103 ntBASIC1.05□□□□□ -2.24
RFWD3Q6PCD5 MIR1278-201ENST00000408753 81 ntBASIC1.05□□□□□ -2.24
RFWD3Q6PCD5 AL358176.2-201ENST00000425769 204 ntBASIC1.05□□□□□ -2.24
RFWD3Q6PCD5 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.05□□□□□ -2.24
RFWD3Q6PCD5 SNORD11-201ENST00000459124 84 ntBASIC1.05□□□□□ -2.24
RFWD3Q6PCD5 RNU6-327P-201ENST00000516270 127 ntBASIC1.05□□□□□ -2.24
RFWD3Q6PCD5 SCARNA15.1-201ENST00000516384 125 ntBASIC1.05□□□□□ -2.24
RFWD3Q6PCD5 RNU6-1007P-201ENST00000516586 107 ntBASIC1.05□□□□□ -2.24
RFWD3Q6PCD5 AL008718.3-201ENST00000610217 321 ntBASIC1.05□□□□□ -2.24
RFWD3Q6PCD5 snoU18.1-201ENST00000629629 71 ntBASIC1.05□□□□□ -2.24
RFWD3Q6PCD5 AC068700.1-201ENST00000565862 3754 ntBASIC1.04□□□□□ -2.24
RFWD3Q6PCD5 Y_RNA.149-201ENST00000363558 117 ntBASIC1.04□□□□□ -2.24
RFWD3Q6PCD5 Y_RNA.162-201ENST00000363683 102 ntBASIC1.04□□□□□ -2.24
RFWD3Q6PCD5 RNU4-38P-201ENST00000364472 129 ntBASIC1.04□□□□□ -2.24
RFWD3Q6PCD5 SNORA22-201ENST00000383907 134 ntBASIC1.04□□□□□ -2.24
RFWD3Q6PCD5 Y_RNA.483-201ENST00000384380 101 ntBASIC1.04□□□□□ -2.24
RFWD3Q6PCD5 Y_RNA.518-201ENST00000384552 113 ntBASIC1.04□□□□□ -2.24
RFWD3Q6PCD5 SNORA22C-201ENST00000384614 134 ntBASIC1.04□□□□□ -2.24
RFWD3Q6PCD5 MIR136-201ENST00000385207 82 ntBASIC1.04□□□□□ -2.24
RFWD3Q6PCD5 MT-TW-201ENST00000387382 68 ntBASIC1.04□□□□□ -2.24
RFWD3Q6PCD5 RPS23P4-201ENST00000487908 423 ntBASIC1.04□□□□□ -2.24
RFWD3Q6PCD5 AC090142.3-201ENST00000519012 385 ntBASIC1.04□□□□□ -2.24
RFWD3Q6PCD5 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.04□□□□□ -2.24
RFWD3Q6PCD5 AC008507.4-201ENST00000585464 127 ntBASIC1.04□□□□□ -2.24
RFWD3Q6PCD5 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
RFWD3Q6PCD5 MIR8065-201ENST00000620577 100 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms