Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.54□□□□□ -2.32
NIPAL3Q6P499 AP003484.1-201ENST00000530974 250 ntBASIC0.54□□□□□ -2.32
NIPAL3Q6P499 RPL23AP91-201ENST00000569211 455 ntBASIC0.54□□□□□ -2.32
NIPAL3Q6P499 AC015726.2-201ENST00000620112 122 ntBASIC0.54□□□□□ -2.32
NIPAL3Q6P499 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.54□□□□□ -2.32
NIPAL3Q6P499 AC068700.1-201ENST00000565862 3754 ntBASIC0.54□□□□□ -2.32
NIPAL3Q6P499 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.53□□□□□ -2.32
NIPAL3Q6P499 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
NIPAL3Q6P499 Y_RNA.70-201ENST00000362886 110 ntBASIC0.53□□□□□ -2.32
NIPAL3Q6P499 RNY3-201ENST00000365484 102 ntBASIC0.53□□□□□ -2.32
NIPAL3Q6P499 SNORD63-201ENST00000384262 68 ntBASIC0.53□□□□□ -2.32
NIPAL3Q6P499 RNU6-937P-201ENST00000384325 106 ntBASIC0.53□□□□□ -2.32
NIPAL3Q6P499 Y_RNA.496-201ENST00000384444 101 ntBASIC0.53□□□□□ -2.32
NIPAL3Q6P499 RNU6-1248P-201ENST00000391096 64 ntBASIC0.53□□□□□ -2.32
NIPAL3Q6P499 RNU6-733P-201ENST00000410759 104 ntBASIC0.53□□□□□ -2.32
NIPAL3Q6P499 AC244098.3-201ENST00000424803 96 ntBASIC0.53□□□□□ -2.32
NIPAL3Q6P499 POLR2KP2-201ENST00000438155 177 ntBASIC0.53□□□□□ -2.32
NIPAL3Q6P499 SCARNA8-201ENST00000515924 131 ntBASIC0.53□□□□□ -2.32
NIPAL3Q6P499 RNU4-77P-201ENST00000516692 156 ntBASIC0.53□□□□□ -2.32
NIPAL3Q6P499 RNU7-181P-201ENST00000517234 74 ntBASIC0.53□□□□□ -2.32
NIPAL3Q6P499 Z83818.1-201ENST00000603584 150 ntBASIC0.53□□□□□ -2.32
NIPAL3Q6P499 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.53□□□□□ -2.32
NIPAL3Q6P499 AC104985.2-201ENST00000620598 500 ntBASIC0.53□□□□□ -2.32
NIPAL3Q6P499 AL606534.2-204ENST00000635008 178 ntBASIC0.53□□□□□ -2.32
NIPAL3Q6P499 Y_RNA.168-201ENST00000363740 102 ntBASIC0.52□□□□□ -2.33
NIPAL3Q6P499 RNU1-115P-201ENST00000365329 160 ntBASIC0.52□□□□□ -2.33
NIPAL3Q6P499 Y_RNA.390-201ENST00000383932 102 ntBASIC0.52□□□□□ -2.33
NIPAL3Q6P499 Y_RNA.537-201ENST00000384626 109 ntBASIC0.52□□□□□ -2.33
NIPAL3Q6P499 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.52□□□□□ -2.33
NIPAL3Q6P499 MIR1278-201ENST00000408753 81 ntBASIC0.52□□□□□ -2.33
NIPAL3Q6P499 RNA5SP222-201ENST00000411039 105 ntBASIC0.52□□□□□ -2.33
NIPAL3Q6P499 RNU7-141P-201ENST00000459304 62 ntBASIC0.52□□□□□ -2.33
NIPAL3Q6P499 AC018659.1-201ENST00000551083 169 ntBASIC0.52□□□□□ -2.33
NIPAL3Q6P499 MIR5000-201ENST00000577717 103 ntBASIC0.52□□□□□ -2.33
NIPAL3Q6P499 AC104695.3-201ENST00000604052 296 ntBASIC0.52□□□□□ -2.33
NIPAL3Q6P499 Y_RNA.143-201ENST00000363520 106 ntBASIC0.51□□□□□ -2.33
NIPAL3Q6P499 RNU6-674P-201ENST00000363831 107 ntBASIC0.51□□□□□ -2.33
NIPAL3Q6P499 Y_RNA.252-201ENST00000364556 101 ntBASIC0.51□□□□□ -2.33
NIPAL3Q6P499 Y_RNA.383-201ENST00000383855 97 ntBASIC0.51□□□□□ -2.33
NIPAL3Q6P499 RNU6-945P-201ENST00000383947 107 ntBASIC0.51□□□□□ -2.33
NIPAL3Q6P499 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.51□□□□□ -2.33
NIPAL3Q6P499 RNA5SP247-201ENST00000411181 105 ntBASIC0.51□□□□□ -2.33
NIPAL3Q6P499 AC236972.2-201ENST00000434979 310 ntBASIC0.51□□□□□ -2.33
NIPAL3Q6P499 SNORD19B-201ENST00000459623 84 ntBASIC0.51□□□□□ -2.33
NIPAL3Q6P499 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.51□□□□□ -2.33
NIPAL3Q6P499 MIR548AO-201ENST00000579992 96 ntBASIC0.51□□□□□ -2.33
NIPAL3Q6P499 MIR4791-201ENST00000607666 84 ntBASIC0.51□□□□□ -2.33
NIPAL3Q6P499 AC006441.5-201ENST00000612680 209 ntBASIC0.51□□□□□ -2.33
NIPAL3Q6P499 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
NIPAL3Q6P499 SNORA72.1-201ENST00000363485 129 ntBASIC0.5□□□□□ -2.33
NIPAL3Q6P499 RNU6-1048P-201ENST00000364054 107 ntBASIC0.5□□□□□ -2.33
NIPAL3Q6P499 Y_RNA.376-201ENST00000365638 108 ntBASIC0.5□□□□□ -2.33
NIPAL3Q6P499 SNORA36.2-201ENST00000384004 127 ntBASIC0.5□□□□□ -2.33
NIPAL3Q6P499 SNORA72.4-201ENST00000384174 132 ntBASIC0.5□□□□□ -2.33
NIPAL3Q6P499 Y_RNA.471-201ENST00000384312 102 ntBASIC0.5□□□□□ -2.33
NIPAL3Q6P499 SNORD72-201ENST00000390994 80 ntBASIC0.5□□□□□ -2.33
NIPAL3Q6P499 RNU6-847P-201ENST00000411115 108 ntBASIC0.5□□□□□ -2.33
NIPAL3Q6P499 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.5□□□□□ -2.33
NIPAL3Q6P499 SEPT14P8-201ENST00000508026 178 ntBASIC0.5□□□□□ -2.33
NIPAL3Q6P499 RNU6-976P-201ENST00000516086 111 ntBASIC0.5□□□□□ -2.33
NIPAL3Q6P499 RNA5SP220-201ENST00000516298 104 ntBASIC0.5□□□□□ -2.33
NIPAL3Q6P499 RNU6-1223P-201ENST00000517124 104 ntBASIC0.5□□□□□ -2.33
NIPAL3Q6P499 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.5□□□□□ -2.33
NIPAL3Q6P499 uc_338.17-201ENST00000619633 179 ntBASIC0.5□□□□□ -2.33
NIPAL3Q6P499 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.5□□□□□ -2.33
NIPAL3Q6P499 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
NIPAL3Q6P499 RNU4-80P-201ENST00000363200 141 ntBASIC0.49□□□□□ -2.33
NIPAL3Q6P499 RNU4-50P-201ENST00000364361 141 ntBASIC0.49□□□□□ -2.33
NIPAL3Q6P499 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.49□□□□□ -2.33
NIPAL3Q6P499 AC005357.1-201ENST00000588399 301 ntBASIC0.49□□□□□ -2.33
NIPAL3Q6P499 AP000753.3-201ENST00000604083 169 ntBASIC0.49□□□□□ -2.33
NIPAL3Q6P499 SNORD113-5-201ENST00000607261 78 ntBASIC0.49□□□□□ -2.33
NIPAL3Q6P499 SNORD58B-201ENST00000607313 66 ntBASIC0.49□□□□□ -2.33
NIPAL3Q6P499 MIR6734-201ENST00000621166 68 ntBASIC0.49□□□□□ -2.33
NIPAL3Q6P499 MTND1P7-201ENST00000632801 297 ntBASIC0.49□□□□□ -2.33
NIPAL3Q6P499 MT-TN-201ENST00000387400 73 ntBASIC0.48□□□□□ -2.33
NIPAL3Q6P499 AL603910.2-201ENST00000407268 136 ntBASIC0.48□□□□□ -2.33
NIPAL3Q6P499 RNU2-14P-201ENST00000411053 191 ntBASIC0.48□□□□□ -2.33
NIPAL3Q6P499 AL157398.1-201ENST00000452981 186 ntBASIC0.48□□□□□ -2.33
NIPAL3Q6P499 AC023449.1-201ENST00000454464 154 ntBASIC0.48□□□□□ -2.33
NIPAL3Q6P499 SNORD11-201ENST00000459124 84 ntBASIC0.48□□□□□ -2.33
NIPAL3Q6P499 FGF7P4-201ENST00000509595 295 ntBASIC0.48□□□□□ -2.33
NIPAL3Q6P499 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.48□□□□□ -2.33
NIPAL3Q6P499 AC122108.2-201ENST00000611946 526 ntBASIC0.48□□□□□ -2.33
NIPAL3Q6P499 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
NIPAL3Q6P499 MIR377-201ENST00000362145 69 ntBASIC0.47□□□□□ -2.33
NIPAL3Q6P499 Y_RNA.80-201ENST00000362996 102 ntBASIC0.47□□□□□ -2.33
NIPAL3Q6P499 RNU6-801P-201ENST00000364087 105 ntBASIC0.47□□□□□ -2.33
NIPAL3Q6P499 Y_RNA.485-201ENST00000384395 102 ntBASIC0.47□□□□□ -2.33
NIPAL3Q6P499 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.47□□□□□ -2.33
NIPAL3Q6P499 RNU4-57P-201ENST00000515980 135 ntBASIC0.47□□□□□ -2.33
NIPAL3Q6P499 AC243994.1-201ENST00000618627 109 ntBASIC0.47□□□□□ -2.33
NIPAL3Q6P499 Y_RNA.5-201ENST00000362334 102 ntBASIC0.46□□□□□ -2.34
NIPAL3Q6P499 RNA5SP347-201ENST00000362445 119 ntBASIC0.46□□□□□ -2.34
NIPAL3Q6P499 RNU6-1283P-201ENST00000365314 105 ntBASIC0.46□□□□□ -2.34
NIPAL3Q6P499 RNU6-1237P-201ENST00000384777 107 ntBASIC0.46□□□□□ -2.34
NIPAL3Q6P499 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.46□□□□□ -2.34
NIPAL3Q6P499 AC107297.1-201ENST00000459991 176 ntBASIC0.46□□□□□ -2.34
NIPAL3Q6P499 AC010655.3-201ENST00000478818 450 ntBASIC0.46□□□□□ -2.34
NIPAL3Q6P499 AC040926.1-201ENST00000530195 238 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 279.1 ms