Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 uc_338.22-201ENST00000622722 187 ntBASIC0.93□□□□□ -2.26
RPUSD3Q6P087 AC008133.2-201ENST00000624540 351 ntBASIC0.93□□□□□ -2.26
RPUSD3Q6P087 MIR4251-201ENST00000635819 61 ntBASIC0.93□□□□□ -2.26
RPUSD3Q6P087 RNU6-899P-201ENST00000363947 107 ntBASIC0.92□□□□□ -2.26
RPUSD3Q6P087 RNU6-144P-201ENST00000383951 107 ntBASIC0.92□□□□□ -2.26
RPUSD3Q6P087 MIR608-201ENST00000384820 100 ntBASIC0.92□□□□□ -2.26
RPUSD3Q6P087 snoU13.25-201ENST00000458945 104 ntBASIC0.92□□□□□ -2.26
RPUSD3Q6P087 RNU7-141P-201ENST00000459304 62 ntBASIC0.92□□□□□ -2.26
RPUSD3Q6P087 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.92□□□□□ -2.26
RPUSD3Q6P087 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.92□□□□□ -2.26
RPUSD3Q6P087 SCARNA8-201ENST00000515924 131 ntBASIC0.92□□□□□ -2.26
RPUSD3Q6P087 ACA64.5-201ENST00000516207 127 ntBASIC0.92□□□□□ -2.26
RPUSD3Q6P087 RNA5SP255-201ENST00000516370 107 ntBASIC0.92□□□□□ -2.26
RPUSD3Q6P087 LARP7P1-201ENST00000605576 316 ntBASIC0.92□□□□□ -2.26
RPUSD3Q6P087 MIR376A1-201ENST00000616574 68 ntBASIC0.92□□□□□ -2.26
RPUSD3Q6P087 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
RPUSD3Q6P087 MIR373-201ENST00000362273 69 ntBASIC0.91□□□□□ -2.26
RPUSD3Q6P087 RNU4-90P-201ENST00000362773 141 ntBASIC0.91□□□□□ -2.26
RPUSD3Q6P087 SNORA25.3-201ENST00000363205 127 ntBASIC0.91□□□□□ -2.26
RPUSD3Q6P087 Y_RNA.148-201ENST00000363557 117 ntBASIC0.91□□□□□ -2.26
RPUSD3Q6P087 Y_RNA.183-201ENST00000363882 113 ntBASIC0.91□□□□□ -2.26
RPUSD3Q6P087 RNU4-38P-201ENST00000364472 129 ntBASIC0.91□□□□□ -2.26
RPUSD3Q6P087 Y_RNA.445-201ENST00000384168 102 ntBASIC0.91□□□□□ -2.26
RPUSD3Q6P087 SNORD111-201ENST00000408139 94 ntBASIC0.91□□□□□ -2.26
RPUSD3Q6P087 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.91□□□□□ -2.26
RPUSD3Q6P087 RPL39P28-201ENST00000465655 155 ntBASIC0.91□□□□□ -2.26
RPUSD3Q6P087 RPL23AP91-201ENST00000569211 455 ntBASIC0.91□□□□□ -2.26
RPUSD3Q6P087 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.91□□□□□ -2.26
RPUSD3Q6P087 AC124312.5-201ENST00000604451 268 ntBASIC0.91□□□□□ -2.26
RPUSD3Q6P087 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.91□□□□□ -2.26
RPUSD3Q6P087 AC007485.1-201ENST00000616755 206 ntBASIC0.91□□□□□ -2.26
RPUSD3Q6P087 RNU4-80P-201ENST00000363200 141 ntBASIC0.9□□□□□ -2.27
RPUSD3Q6P087 SNORD113-8-201ENST00000363497 74 ntBASIC0.9□□□□□ -2.27
RPUSD3Q6P087 MIR1185-1-201ENST00000408598 86 ntBASIC0.9□□□□□ -2.27
RPUSD3Q6P087 U7.7-201ENST00000459276 60 ntBASIC0.9□□□□□ -2.27
RPUSD3Q6P087 RNU6-197P-201ENST00000516680 100 ntBASIC0.9□□□□□ -2.27
RPUSD3Q6P087 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.9□□□□□ -2.27
RPUSD3Q6P087 MIR4653-201ENST00000585107 83 ntBASIC0.9□□□□□ -2.27
RPUSD3Q6P087 AC008507.4-201ENST00000585464 127 ntBASIC0.9□□□□□ -2.27
RPUSD3Q6P087 AC037487.3-201ENST00000606668 112 ntBASIC0.9□□□□□ -2.27
RPUSD3Q6P087 AC103810.9-201ENST00000606688 112 ntBASIC0.9□□□□□ -2.27
RPUSD3Q6P087 AC134026.1-201ENST00000623249 2239 ntBASIC0.9□□□□□ -2.27
RPUSD3Q6P087 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.89□□□□□ -2.27
RPUSD3Q6P087 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
RPUSD3Q6P087 Y_RNA.222-201ENST00000364264 102 ntBASIC0.89□□□□□ -2.27
RPUSD3Q6P087 RNU6-101P-201ENST00000410323 104 ntBASIC0.89□□□□□ -2.27
RPUSD3Q6P087 AC005534.2-201ENST00000431047 433 ntBASIC0.89□□□□□ -2.27
RPUSD3Q6P087 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.89□□□□□ -2.27
RPUSD3Q6P087 MTND4P19-201ENST00000446659 478 ntBASIC0.89□□□□□ -2.27
RPUSD3Q6P087 PSMC1P5-201ENST00000512850 177 ntBASIC0.89□□□□□ -2.27
RPUSD3Q6P087 RN7SKP164-201ENST00000516138 266 ntBASIC0.89□□□□□ -2.27
RPUSD3Q6P087 AC109810.1-201ENST00000534066 224 ntBASIC0.89□□□□□ -2.27
RPUSD3Q6P087 AC131055.1-201ENST00000584626 316 ntBASIC0.89□□□□□ -2.27
RPUSD3Q6P087 AL442644.1-201ENST00000454390 3105 ntBASIC0.89□□□□□ -2.27
RPUSD3Q6P087 Y_RNA.136-201ENST00000363444 102 ntBASIC0.88□□□□□ -2.27
RPUSD3Q6P087 RNU6-268P-201ENST00000364174 107 ntBASIC0.88□□□□□ -2.27
RPUSD3Q6P087 U8.17-201ENST00000391292 132 ntBASIC0.88□□□□□ -2.27
RPUSD3Q6P087 RNU6-994P-201ENST00000410507 111 ntBASIC0.88□□□□□ -2.27
RPUSD3Q6P087 NDUFA4P2-201ENST00000489989 244 ntBASIC0.88□□□□□ -2.27
RPUSD3Q6P087 AC023827.1-201ENST00000569247 97 ntBASIC0.88□□□□□ -2.27
RPUSD3Q6P087 MIR548AR-201ENST00000582191 57 ntBASIC0.88□□□□□ -2.27
RPUSD3Q6P087 PART1_1.1-201ENST00000611761 217 ntBASIC0.88□□□□□ -2.27
RPUSD3Q6P087 AC106800.4-201ENST00000614905 153 ntBASIC0.88□□□□□ -2.27
RPUSD3Q6P087 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.87□□□□□ -2.27
RPUSD3Q6P087 RNU6-342P-201ENST00000384521 104 ntBASIC0.87□□□□□ -2.27
RPUSD3Q6P087 Y_RNA.537-201ENST00000384626 109 ntBASIC0.87□□□□□ -2.27
RPUSD3Q6P087 Y_RNA.569-201ENST00000384749 103 ntBASIC0.87□□□□□ -2.27
RPUSD3Q6P087 MIR598-201ENST00000384868 97 ntBASIC0.87□□□□□ -2.27
RPUSD3Q6P087 Y_RNA.639-201ENST00000458981 102 ntBASIC0.87□□□□□ -2.27
RPUSD3Q6P087 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.87□□□□□ -2.27
RPUSD3Q6P087 RNU6-191P-201ENST00000516295 94 ntBASIC0.87□□□□□ -2.27
RPUSD3Q6P087 RNU6-1110P-201ENST00000516462 101 ntBASIC0.87□□□□□ -2.27
RPUSD3Q6P087 MIR2115-201ENST00000516657 100 ntBASIC0.87□□□□□ -2.27
RPUSD3Q6P087 Y_RNA.715-201ENST00000517082 110 ntBASIC0.87□□□□□ -2.27
RPUSD3Q6P087 RNU6-988P-201ENST00000519081 107 ntBASIC0.87□□□□□ -2.27
RPUSD3Q6P087 MIR5000-201ENST00000577717 103 ntBASIC0.87□□□□□ -2.27
RPUSD3Q6P087 MIR4300-201ENST00000581016 96 ntBASIC0.87□□□□□ -2.27
RPUSD3Q6P087 AC005357.1-201ENST00000588399 301 ntBASIC0.87□□□□□ -2.27
RPUSD3Q6P087 AC006441.5-201ENST00000612680 209 ntBASIC0.87□□□□□ -2.27
RPUSD3Q6P087 RNU6-1205P-201ENST00000363625 106 ntBASIC0.86□□□□□ -2.27
RPUSD3Q6P087 RNU6-801P-201ENST00000364087 105 ntBASIC0.86□□□□□ -2.27
RPUSD3Q6P087 SNORD113.3-201ENST00000364630 78 ntBASIC0.86□□□□□ -2.27
RPUSD3Q6P087 RNU6-396P-201ENST00000365369 105 ntBASIC0.86□□□□□ -2.27
RPUSD3Q6P087 SNORD42.2-201ENST00000365570 69 ntBASIC0.86□□□□□ -2.27
RPUSD3Q6P087 SNORA51.10-201ENST00000384418 136 ntBASIC0.86□□□□□ -2.27
RPUSD3Q6P087 RNU6-110P-201ENST00000384508 104 ntBASIC0.86□□□□□ -2.27
RPUSD3Q6P087 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.86□□□□□ -2.27
RPUSD3Q6P087 RNU6-130P-201ENST00000411112 103 ntBASIC0.86□□□□□ -2.27
RPUSD3Q6P087 SNRPGP14-201ENST00000435400 219 ntBASIC0.86□□□□□ -2.27
RPUSD3Q6P087 AC107297.1-201ENST00000459991 176 ntBASIC0.86□□□□□ -2.27
RPUSD3Q6P087 CYP3A137P-201ENST00000562436 69 ntBASIC0.86□□□□□ -2.27
RPUSD3Q6P087 AL512605.2-201ENST00000592972 256 ntBASIC0.86□□□□□ -2.27
RPUSD3Q6P087 PVT1_3.1-201ENST00000620853 95 ntBASIC0.86□□□□□ -2.27
RPUSD3Q6P087 MIR369-201ENST00000362155 70 ntBASIC0.85□□□□□ -2.27
RPUSD3Q6P087 Y_RNA.286-201ENST00000364813 102 ntBASIC0.85□□□□□ -2.27
RPUSD3Q6P087 Y_RNA.380-201ENST00000365663 111 ntBASIC0.85□□□□□ -2.27
RPUSD3Q6P087 RNA5SP496-201ENST00000391240 109 ntBASIC0.85□□□□□ -2.27
RPUSD3Q6P087 MTCO2P33-201ENST00000402100 465 ntBASIC0.85□□□□□ -2.27
RPUSD3Q6P087 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.85□□□□□ -2.27
RPUSD3Q6P087 AL392103.1-201ENST00000447000 198 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 724.5 ms