Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 Y_RNA.153-201ENST00000363615 91 ntBASIC1.09□□□□□ -2.23
KRT39Q6A163 RNU6-674P-201ENST00000363831 107 ntBASIC1.09□□□□□ -2.23
KRT39Q6A163 Y_RNA.214-201ENST00000364201 112 ntBASIC1.09□□□□□ -2.23
KRT39Q6A163 Y_RNA.276-201ENST00000364732 109 ntBASIC1.09□□□□□ -2.23
KRT39Q6A163 RNU6-806P-201ENST00000365147 105 ntBASIC1.09□□□□□ -2.23
KRT39Q6A163 RNU6-290P-201ENST00000365212 101 ntBASIC1.09□□□□□ -2.23
KRT39Q6A163 Y_RNA.455-201ENST00000384230 98 ntBASIC1.09□□□□□ -2.23
KRT39Q6A163 RNU6-1160P-201ENST00000384546 104 ntBASIC1.09□□□□□ -2.23
KRT39Q6A163 Y_RNA.569-201ENST00000384749 103 ntBASIC1.09□□□□□ -2.23
KRT39Q6A163 MIR15B-201ENST00000385045 98 ntBASIC1.09□□□□□ -2.23
KRT39Q6A163 RNU6-763P-201ENST00000390865 106 ntBASIC1.09□□□□□ -2.23
KRT39Q6A163 RNU6-321P-201ENST00000410912 106 ntBASIC1.09□□□□□ -2.23
KRT39Q6A163 AC063976.4-201ENST00000421971 163 ntBASIC1.09□□□□□ -2.23
KRT39Q6A163 MTND2P23-201ENST00000422990 651 ntBASIC1.09□□□□□ -2.23
KRT39Q6A163 AC098869.1-201ENST00000481627 292 ntBASIC1.09□□□□□ -2.23
KRT39Q6A163 MRPS35P2-201ENST00000508242 191 ntBASIC1.09□□□□□ -2.23
KRT39Q6A163 TRMT112P2-201ENST00000512910 132 ntBASIC1.09□□□□□ -2.23
KRT39Q6A163 RNU7-41P-201ENST00000515917 61 ntBASIC1.09□□□□□ -2.23
KRT39Q6A163 SNORA18.7-201ENST00000516910 131 ntBASIC1.09□□□□□ -2.23
KRT39Q6A163 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.09□□□□□ -2.23
KRT39Q6A163 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.09□□□□□ -2.23
KRT39Q6A163 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.09□□□□□ -2.23
KRT39Q6A163 AC136443.5-201ENST00000603741 370 ntBASIC1.09□□□□□ -2.23
KRT39Q6A163 AL355297.3-201ENST00000604082 446 ntBASIC1.09□□□□□ -2.23
KRT39Q6A163 AC068700.1-201ENST00000565862 3754 ntBASIC1.08□□□□□ -2.24
KRT39Q6A163 SNORD14E-201ENST00000364009 85 ntBASIC1.08□□□□□ -2.24
KRT39Q6A163 RNU4-38P-201ENST00000364472 129 ntBASIC1.08□□□□□ -2.24
KRT39Q6A163 RNU6-639P-201ENST00000384074 107 ntBASIC1.08□□□□□ -2.24
KRT39Q6A163 SNORA80D-201ENST00000384488 135 ntBASIC1.08□□□□□ -2.24
KRT39Q6A163 Y_RNA.541-201ENST00000384640 113 ntBASIC1.08□□□□□ -2.24
KRT39Q6A163 MIR215-201ENST00000384858 110 ntBASIC1.08□□□□□ -2.24
KRT39Q6A163 MTCO2P33-201ENST00000402100 465 ntBASIC1.08□□□□□ -2.24
KRT39Q6A163 RPL21P38-201ENST00000418090 167 ntBASIC1.08□□□□□ -2.24
KRT39Q6A163 MRPL35P3-201ENST00000421557 364 ntBASIC1.08□□□□□ -2.24
KRT39Q6A163 AC002429.1-201ENST00000437672 148 ntBASIC1.08□□□□□ -2.24
KRT39Q6A163 SNORD11-201ENST00000459124 84 ntBASIC1.08□□□□□ -2.24
KRT39Q6A163 SNORD123-201ENST00000459473 70 ntBASIC1.08□□□□□ -2.24
KRT39Q6A163 COX6CP14-201ENST00000469580 174 ntBASIC1.08□□□□□ -2.24
KRT39Q6A163 AP003716.2-201ENST00000528260 108 ntBASIC1.08□□□□□ -2.24
KRT39Q6A163 AL442663.2-201ENST00000554385 511 ntBASIC1.08□□□□□ -2.24
KRT39Q6A163 AC008507.4-201ENST00000585464 127 ntBASIC1.08□□□□□ -2.24
KRT39Q6A163 AC103810.9-201ENST00000606688 112 ntBASIC1.08□□□□□ -2.24
KRT39Q6A163 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRT39Q6A163 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.08□□□□□ -2.24
KRT39Q6A163 Y_RNA.162-201ENST00000363683 102 ntBASIC1.07□□□□□ -2.24
KRT39Q6A163 MIR520C-201ENST00000385005 87 ntBASIC1.07□□□□□ -2.24
KRT39Q6A163 MIR548F4-201ENST00000408515 105 ntBASIC1.07□□□□□ -2.24
KRT39Q6A163 RNU6-985P-201ENST00000410182 104 ntBASIC1.07□□□□□ -2.24
KRT39Q6A163 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.07□□□□□ -2.24
KRT39Q6A163 SNORA40.15-201ENST00000516884 107 ntBASIC1.07□□□□□ -2.24
KRT39Q6A163 RPL23AP91-201ENST00000569211 455 ntBASIC1.07□□□□□ -2.24
KRT39Q6A163 MIR4764-201ENST00000580680 88 ntBASIC1.07□□□□□ -2.24
KRT39Q6A163 AC006504.6-201ENST00000590142 199 ntBASIC1.07□□□□□ -2.24
KRT39Q6A163 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
KRT39Q6A163 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
KRT39Q6A163 Y_RNA.4-201ENST00000362333 112 ntBASIC1.06□□□□□ -2.24
KRT39Q6A163 RNU6-770P-201ENST00000363929 105 ntBASIC1.06□□□□□ -2.24
KRT39Q6A163 Y_RNA.210-201ENST00000364161 110 ntBASIC1.06□□□□□ -2.24
KRT39Q6A163 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.06□□□□□ -2.24
KRT39Q6A163 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.06□□□□□ -2.24
KRT39Q6A163 RNU7-21P-201ENST00000459430 62 ntBASIC1.06□□□□□ -2.24
KRT39Q6A163 MTATP8P1-201ENST00000467115 207 ntBASIC1.06□□□□□ -2.24
KRT39Q6A163 RNU6-327P-201ENST00000516270 127 ntBASIC1.06□□□□□ -2.24
KRT39Q6A163 RNU7-43P-201ENST00000516554 64 ntBASIC1.06□□□□□ -2.24
KRT39Q6A163 Y_RNA.720-201ENST00000517166 92 ntBASIC1.06□□□□□ -2.24
KRT39Q6A163 MIR2681-201ENST00000581814 105 ntBASIC1.06□□□□□ -2.24
KRT39Q6A163 AC008163.1-202ENST00000636004 2889 ntBASIC1.05□□□□□ -2.24
KRT39Q6A163 Y_RNA.19-201ENST00000362462 99 ntBASIC1.05□□□□□ -2.24
KRT39Q6A163 Y_RNA.145-201ENST00000363527 102 ntBASIC1.05□□□□□ -2.24
KRT39Q6A163 RNU6-899P-201ENST00000363947 107 ntBASIC1.05□□□□□ -2.24
KRT39Q6A163 RNU6-442P-201ENST00000383968 104 ntBASIC1.05□□□□□ -2.24
KRT39Q6A163 Y_RNA.422-201ENST00000384054 114 ntBASIC1.05□□□□□ -2.24
KRT39Q6A163 SNORD72-201ENST00000390994 80 ntBASIC1.05□□□□□ -2.24
KRT39Q6A163 AL603910.2-201ENST00000407268 136 ntBASIC1.05□□□□□ -2.24
KRT39Q6A163 Y_RNA.637-201ENST00000459424 114 ntBASIC1.05□□□□□ -2.24
KRT39Q6A163 SNORD124-201ENST00000459577 104 ntBASIC1.05□□□□□ -2.24
KRT39Q6A163 MIR4781-201ENST00000585250 76 ntBASIC1.05□□□□□ -2.24
KRT39Q6A163 AC008737.2-201ENST00000599446 118 ntBASIC1.05□□□□□ -2.24
KRT39Q6A163 HSPE1P19-201ENST00000603327 295 ntBASIC1.05□□□□□ -2.24
KRT39Q6A163 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
KRT39Q6A163 RNA5SP264-201ENST00000363115 107 ntBASIC1.04□□□□□ -2.24
KRT39Q6A163 RNU6-268P-201ENST00000364174 107 ntBASIC1.04□□□□□ -2.24
KRT39Q6A163 Y_RNA.512-201ENST00000384518 102 ntBASIC1.04□□□□□ -2.24
KRT39Q6A163 SNORD28B-201ENST00000390993 75 ntBASIC1.04□□□□□ -2.24
KRT39Q6A163 snosnR66.1-201ENST00000391095 99 ntBASIC1.04□□□□□ -2.24
KRT39Q6A163 MIR1185-1-201ENST00000408598 86 ntBASIC1.04□□□□□ -2.24
KRT39Q6A163 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.04□□□□□ -2.24
KRT39Q6A163 AL358176.2-201ENST00000425769 204 ntBASIC1.04□□□□□ -2.24
KRT39Q6A163 MTND5P22-201ENST00000458380 195 ntBASIC1.04□□□□□ -2.24
KRT39Q6A163 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.04□□□□□ -2.24
KRT39Q6A163 RN7SKP164-201ENST00000516138 266 ntBASIC1.04□□□□□ -2.24
KRT39Q6A163 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.04□□□□□ -2.24
KRT39Q6A163 AL391516.1-201ENST00000554380 2449 ntBASIC1.04□□□□□ -2.24
KRT39Q6A163 RNU6-1272P-201ENST00000362776 107 ntBASIC1.03□□□□□ -2.24
KRT39Q6A163 SNORA25.3-201ENST00000363205 127 ntBASIC1.03□□□□□ -2.24
KRT39Q6A163 RNU6-1309P-201ENST00000363305 108 ntBASIC1.03□□□□□ -2.24
KRT39Q6A163 Y_RNA.133-201ENST00000363428 110 ntBASIC1.03□□□□□ -2.24
KRT39Q6A163 SNORA22-201ENST00000383907 134 ntBASIC1.03□□□□□ -2.24
KRT39Q6A163 Y_RNA.459-201ENST00000384251 102 ntBASIC1.03□□□□□ -2.24
KRT39Q6A163 SNORA22C-201ENST00000384614 134 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 251.9 ms