Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 RNU6-1209P-201ENST00000363655 107 ntBASIC0.05□□□□□ -2.4
ZNF404Q494X3 Y_RNA.230-201ENST00000364348 109 ntBASIC0.05□□□□□ -2.4
ZNF404Q494X3 Y_RNA.258-201ENST00000364613 105 ntBASIC0.05□□□□□ -2.4
ZNF404Q494X3 MIR938-201ENST00000401216 83 ntBASIC0.05□□□□□ -2.4
ZNF404Q494X3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.05□□□□□ -2.4
ZNF404Q494X3 MTND1P2-201ENST00000430604 821 ntBASIC0.05□□□□□ -2.4
ZNF404Q494X3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.05□□□□□ -2.4
ZNF404Q494X3 RNU7-62P-201ENST00000458856 62 ntBASIC0.05□□□□□ -2.4
ZNF404Q494X3 RNA5SP94-201ENST00000516917 108 ntBASIC0.05□□□□□ -2.4
ZNF404Q494X3 AC024405.2-202ENST00000532731 184 ntBASIC0.05□□□□□ -2.4
ZNF404Q494X3 AC008507.4-201ENST00000585464 127 ntBASIC0.05□□□□□ -2.4
ZNF404Q494X3 AP003357.1-201ENST00000604497 148 ntBASIC0.05□□□□□ -2.4
ZNF404Q494X3 RAC1P9-201ENST00000604990 392 ntBASIC0.05□□□□□ -2.4
ZNF404Q494X3 AC022441.3-201ENST00000605737 136 ntBASIC0.05□□□□□ -2.4
ZNF404Q494X3 SNORA25.18-201ENST00000607153 114 ntBASIC0.05□□□□□ -2.4
ZNF404Q494X3 AC011476.5-201ENST00000615594 130 ntBASIC0.05□□□□□ -2.4
ZNF404Q494X3 AC048344.4-201ENST00000619744 527 ntBASIC0.05□□□□□ -2.4
ZNF404Q494X3 MIR3688-2-201ENST00000636963 87 ntBASIC0.05□□□□□ -2.4
ZNF404Q494X3 RNU4-24P-201ENST00000364565 139 ntBASIC0.04□□□□□ -2.4
ZNF404Q494X3 Y_RNA.310-201ENST00000365063 113 ntBASIC0.04□□□□□ -2.4
ZNF404Q494X3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
ZNF404Q494X3 Y_RNA.456-201ENST00000384232 111 ntBASIC0.04□□□□□ -2.4
ZNF404Q494X3 RNU6-1156P-201ENST00000410365 100 ntBASIC0.04□□□□□ -2.4
ZNF404Q494X3 AC073261.1-201ENST00000429409 121 ntBASIC0.04□□□□□ -2.4
ZNF404Q494X3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.04□□□□□ -2.4
ZNF404Q494X3 RNU2-13P-201ENST00000515909 113 ntBASIC0.04□□□□□ -2.4
ZNF404Q494X3 SNORA18.4-201ENST00000516440 124 ntBASIC0.04□□□□□ -2.4
ZNF404Q494X3 RNA5SP330-201ENST00000517096 96 ntBASIC0.04□□□□□ -2.4
ZNF404Q494X3 AC127455.1-201ENST00000565496 145 ntBASIC0.04□□□□□ -2.4
ZNF404Q494X3 MIR4659A-201ENST00000580269 81 ntBASIC0.04□□□□□ -2.4
ZNF404Q494X3 AL669831.3-213ENST00000636676 183 ntBASIC0.04□□□□□ -2.4
ZNF404Q494X3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
ZNF404Q494X3 SNORD115-47-201ENST00000391226 86 ntBASIC0.03□□□□□ -2.4
ZNF404Q494X3 AL590004.1-201ENST00000405321 300 ntBASIC0.03□□□□□ -2.4
ZNF404Q494X3 SNORD100-201ENST00000408573 76 ntBASIC0.03□□□□□ -2.4
ZNF404Q494X3 BTF3P11-201ENST00000426582 477 ntBASIC0.03□□□□□ -2.4
ZNF404Q494X3 RNU7-4P-201ENST00000516961 62 ntBASIC0.03□□□□□ -2.4
ZNF404Q494X3 RNU6-1213P-201ENST00000517075 94 ntBASIC0.03□□□□□ -2.4
ZNF404Q494X3 RNU6-264P-201ENST00000517134 104 ntBASIC0.03□□□□□ -2.4
ZNF404Q494X3 RN7SKP295-201ENST00000517264 153 ntBASIC0.03□□□□□ -2.4
ZNF404Q494X3 AC144568.1-201ENST00000520139 137 ntBASIC0.03□□□□□ -2.4
ZNF404Q494X3 U4.5-201ENST00000617137 123 ntBASIC0.03□□□□□ -2.4
ZNF404Q494X3 MIR4315-1-201ENST00000636800 73 ntBASIC0.03□□□□□ -2.4
ZNF404Q494X3 MIR4315-2-201ENST00000640925 73 ntBASIC0.03□□□□□ -2.4
ZNF404Q494X3 SNORD118-201ENST00000363593 134 ntBASIC0.02□□□□□ -2.41
ZNF404Q494X3 MIR7-2-201ENST00000384970 110 ntBASIC0.02□□□□□ -2.41
ZNF404Q494X3 SNORD72-201ENST00000390994 80 ntBASIC0.02□□□□□ -2.41
ZNF404Q494X3 RNA5SP63-201ENST00000391225 112 ntBASIC0.02□□□□□ -2.41
ZNF404Q494X3 MIR1197-201ENST00000408818 88 ntBASIC0.02□□□□□ -2.41
ZNF404Q494X3 RNU7-169P-201ENST00000459456 61 ntBASIC0.02□□□□□ -2.41
ZNF404Q494X3 RNU6-863P-201ENST00000515989 104 ntBASIC0.02□□□□□ -2.41
ZNF404Q494X3 RNU6-120P-201ENST00000516077 103 ntBASIC0.02□□□□□ -2.41
ZNF404Q494X3 RNU7-115P-201ENST00000516433 55 ntBASIC0.02□□□□□ -2.41
ZNF404Q494X3 AC069113.3-201ENST00000521019 150 ntBASIC0.02□□□□□ -2.41
ZNF404Q494X3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.02□□□□□ -2.41
ZNF404Q494X3 EIF1P4-201ENST00000572664 335 ntBASIC0.02□□□□□ -2.41
ZNF404Q494X3 AC090897.1-201ENST00000580909 226 ntBASIC0.02□□□□□ -2.41
ZNF404Q494X3 MIR2681-201ENST00000581814 105 ntBASIC0.02□□□□□ -2.41
ZNF404Q494X3 AC006441.5-201ENST00000612680 209 ntBASIC0.02□□□□□ -2.41
ZNF404Q494X3 MIR548AY-201ENST00000617669 107 ntBASIC0.02□□□□□ -2.41
ZNF404Q494X3 Y_RNA.242-201ENST00000364473 110 ntBASIC0.01□□□□□ -2.41
ZNF404Q494X3 SNORA63C-201ENST00000364578 129 ntBASIC0.01□□□□□ -2.41
ZNF404Q494X3 RNU6-1175P-201ENST00000365200 107 ntBASIC0.01□□□□□ -2.41
ZNF404Q494X3 RNU6-716P-201ENST00000365621 103 ntBASIC0.01□□□□□ -2.41
ZNF404Q494X3 RNU6-815P-201ENST00000384080 113 ntBASIC0.01□□□□□ -2.41
ZNF404Q494X3 SNORA8.2-201ENST00000384372 139 ntBASIC0.01□□□□□ -2.41
ZNF404Q494X3 RNU6-364P-201ENST00000384387 107 ntBASIC0.01□□□□□ -2.41
ZNF404Q494X3 AC090844.1-201ENST00000422019 156 ntBASIC0.01□□□□□ -2.41
ZNF404Q494X3 AC005042.3-201ENST00000453230 174 ntBASIC0.01□□□□□ -2.41
ZNF404Q494X3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.01□□□□□ -2.41
ZNF404Q494X3 AC091959.1-201ENST00000495857 238 ntBASIC0.01□□□□□ -2.41
ZNF404Q494X3 RNU4-77P-201ENST00000516692 156 ntBASIC0.01□□□□□ -2.41
ZNF404Q494X3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.01□□□□□ -2.41
ZNF404Q494X3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.01□□□□□ -2.41
ZNF404Q494X3 SNORA42.1-201ENST00000363515 137 ntBASIC0□□□□□ -2.41
ZNF404Q494X3 U8.7-201ENST00000364940 136 ntBASIC0□□□□□ -2.41
ZNF404Q494X3 AL603910.2-201ENST00000407268 136 ntBASIC0□□□□□ -2.41
ZNF404Q494X3 Y_RNA.605-201ENST00000410577 105 ntBASIC0□□□□□ -2.41
ZNF404Q494X3 snoU13.16-201ENST00000459350 104 ntBASIC0□□□□□ -2.41
ZNF404Q494X3 AC107297.1-201ENST00000459991 176 ntBASIC0□□□□□ -2.41
ZNF404Q494X3 RNU6-1007P-201ENST00000516586 107 ntBASIC0□□□□□ -2.41
ZNF404Q494X3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0□□□□□ -2.41
ZNF404Q494X3 AC008608.1-201ENST00000603910 127 ntBASIC0□□□□□ -2.41
ZNF404Q494X3 AL355297.3-201ENST00000604082 446 ntBASIC0□□□□□ -2.41
ZNF404Q494X3 AC010332.2-201ENST00000613083 1904 ntBASIC0□□□□□ -2.41
ZNF404Q494X3 uc_338.6-201ENST00000613544 171 ntBASIC0□□□□□ -2.41
ZNF404Q494X3 AC134878.1-201ENST00000619901 243 ntBASIC0□□□□□ -2.41
ZNF404Q494X3 RNY3P11-201ENST00000364153 102 ntBASIC-0.01□□□□□ -2.41
ZNF404Q494X3 Y_RNA.570-201ENST00000384750 101 ntBASIC-0.01□□□□□ -2.41
ZNF404Q494X3 MIR628-201ENST00000385229 95 ntBASIC-0.01□□□□□ -2.41
ZNF404Q494X3 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.01□□□□□ -2.41
ZNF404Q494X3 RNU6-747P-201ENST00000390928 104 ntBASIC-0.01□□□□□ -2.41
ZNF404Q494X3 RNU6-241P-201ENST00000391148 104 ntBASIC-0.01□□□□□ -2.41
ZNF404Q494X3 RNU6-447P-201ENST00000410293 104 ntBASIC-0.01□□□□□ -2.41
ZNF404Q494X3 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.01□□□□□ -2.41
ZNF404Q494X3 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.01□□□□□ -2.41
ZNF404Q494X3 RNU6-355P-201ENST00000410427 104 ntBASIC-0.01□□□□□ -2.41
ZNF404Q494X3 RNU6-791P-201ENST00000410467 104 ntBASIC-0.01□□□□□ -2.41
ZNF404Q494X3 RNU6-705P-201ENST00000410601 104 ntBASIC-0.01□□□□□ -2.41
ZNF404Q494X3 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms