Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 Y_RNA.796-201ENST00000364268 102 ntBASIC1.49□□□□□ -2.17
USP41Q3LFD5 Y_RNA.799-201ENST00000364992 102 ntBASIC1.49□□□□□ -2.17
USP41Q3LFD5 Y_RNA.518-201ENST00000384552 113 ntBASIC1.49□□□□□ -2.17
USP41Q3LFD5 MIR891A-201ENST00000401237 79 ntBASIC1.49□□□□□ -2.17
USP41Q3LFD5 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.49□□□□□ -2.17
USP41Q3LFD5 SNX2P2-201ENST00000424553 323 ntBASIC1.49□□□□□ -2.17
USP41Q3LFD5 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.49□□□□□ -2.17
USP41Q3LFD5 AC245517.4-201ENST00000448601 281 ntBASIC1.49□□□□□ -2.17
USP41Q3LFD5 RNU6-1132P-201ENST00000459214 107 ntBASIC1.49□□□□□ -2.17
USP41Q3LFD5 AC092991.1-201ENST00000477176 376 ntBASIC1.49□□□□□ -2.17
USP41Q3LFD5 Y_RNA.679-201ENST00000516416 91 ntBASIC1.49□□□□□ -2.17
USP41Q3LFD5 SNORD45.4-201ENST00000516629 73 ntBASIC1.49□□□□□ -2.17
USP41Q3LFD5 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.49□□□□□ -2.17
USP41Q3LFD5 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
USP41Q3LFD5 Y_RNA.14-201ENST00000362415 103 ntBASIC1.48□□□□□ -2.17
USP41Q3LFD5 RNU6-833P-201ENST00000363486 107 ntBASIC1.48□□□□□ -2.17
USP41Q3LFD5 RNU4-10P-201ENST00000364383 140 ntBASIC1.48□□□□□ -2.17
USP41Q3LFD5 Y_RNA.277-201ENST00000364754 102 ntBASIC1.48□□□□□ -2.17
USP41Q3LFD5 snoU2-30.1-201ENST00000365012 70 ntBASIC1.48□□□□□ -2.17
USP41Q3LFD5 Y_RNA.352-201ENST00000365439 102 ntBASIC1.48□□□□□ -2.17
USP41Q3LFD5 RPL39P38-201ENST00000467018 153 ntBASIC1.48□□□□□ -2.17
USP41Q3LFD5 RNA5SP445-201ENST00000515889 115 ntBASIC1.48□□□□□ -2.17
USP41Q3LFD5 Y_RNA.668-201ENST00000516233 93 ntBASIC1.48□□□□□ -2.17
USP41Q3LFD5 AC006006.1-201ENST00000603082 144 ntBASIC1.48□□□□□ -2.17
USP41Q3LFD5 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.48□□□□□ -2.17
USP41Q3LFD5 7SK.10-201ENST00000621414 298 ntBASIC1.48□□□□□ -2.17
USP41Q3LFD5 AC027279.3-201ENST00000625055 122 ntBASIC1.48□□□□□ -2.17
USP41Q3LFD5 Y_RNA.144-201ENST00000363521 113 ntBASIC1.47□□□□□ -2.17
USP41Q3LFD5 SNORD50B-201ENST00000364995 70 ntBASIC1.47□□□□□ -2.17
USP41Q3LFD5 RNU6-1065P-201ENST00000384513 106 ntBASIC1.47□□□□□ -2.17
USP41Q3LFD5 MIR802-201ENST00000390235 94 ntBASIC1.47□□□□□ -2.17
USP41Q3LFD5 AC027119.1-201ENST00000440877 241 ntBASIC1.47□□□□□ -2.17
USP41Q3LFD5 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.47□□□□□ -2.17
USP41Q3LFD5 MIR4724-201ENST00000579485 89 ntBASIC1.47□□□□□ -2.17
USP41Q3LFD5 AP001485.1-201ENST00000604799 199 ntBASIC1.47□□□□□ -2.17
USP41Q3LFD5 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.47□□□□□ -2.17
USP41Q3LFD5 SNORD14E-201ENST00000364009 85 ntBASIC1.46□□□□□ -2.18
USP41Q3LFD5 RNU6-702P-201ENST00000364982 107 ntBASIC1.46□□□□□ -2.18
USP41Q3LFD5 RNU6-969P-201ENST00000383900 105 ntBASIC1.46□□□□□ -2.18
USP41Q3LFD5 RNU6-463P-201ENST00000384340 107 ntBASIC1.46□□□□□ -2.18
USP41Q3LFD5 Y_RNA.477-201ENST00000384352 108 ntBASIC1.46□□□□□ -2.18
USP41Q3LFD5 MIR548H3-201ENST00000408771 118 ntBASIC1.46□□□□□ -2.18
USP41Q3LFD5 NDUFA4P2-201ENST00000489989 244 ntBASIC1.46□□□□□ -2.18
USP41Q3LFD5 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.46□□□□□ -2.18
USP41Q3LFD5 MIR3149-201ENST00000584629 83 ntBASIC1.46□□□□□ -2.18
USP41Q3LFD5 AC062037.2-201ENST00000610137 73 ntBASIC1.46□□□□□ -2.18
USP41Q3LFD5 Y_RNA.802-201ENST00000614892 130 ntBASIC1.46□□□□□ -2.18
USP41Q3LFD5 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
USP41Q3LFD5 SNORD27-201ENST00000363981 72 ntBASIC1.45□□□□□ -2.18
USP41Q3LFD5 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.45□□□□□ -2.18
USP41Q3LFD5 MIR1298-201ENST00000408783 112 ntBASIC1.45□□□□□ -2.18
USP41Q3LFD5 RPS27P16-201ENST00000425758 201 ntBASIC1.45□□□□□ -2.18
USP41Q3LFD5 RNU6-917P-201ENST00000516294 104 ntBASIC1.45□□□□□ -2.18
USP41Q3LFD5 RNU6-922P-201ENST00000516753 99 ntBASIC1.45□□□□□ -2.18
USP41Q3LFD5 RNU6-902P-201ENST00000517212 91 ntBASIC1.45□□□□□ -2.18
USP41Q3LFD5 MIR4643-201ENST00000577473 78 ntBASIC1.45□□□□□ -2.18
USP41Q3LFD5 Y_RNA.24-201ENST00000362508 103 ntBASIC1.44□□□□□ -2.18
USP41Q3LFD5 Y_RNA.82-201ENST00000363000 102 ntBASIC1.44□□□□□ -2.18
USP41Q3LFD5 Y_RNA.92-201ENST00000363043 102 ntBASIC1.44□□□□□ -2.18
USP41Q3LFD5 Y_RNA.122-201ENST00000363331 96 ntBASIC1.44□□□□□ -2.18
USP41Q3LFD5 Y_RNA.235-201ENST00000364412 102 ntBASIC1.44□□□□□ -2.18
USP41Q3LFD5 Y_RNA.306-201ENST00000365015 102 ntBASIC1.44□□□□□ -2.18
USP41Q3LFD5 Y_RNA.312-201ENST00000365089 102 ntBASIC1.44□□□□□ -2.18
USP41Q3LFD5 Y_RNA.322-201ENST00000365151 102 ntBASIC1.44□□□□□ -2.18
USP41Q3LFD5 Y_RNA.452-201ENST00000384202 108 ntBASIC1.44□□□□□ -2.18
USP41Q3LFD5 SNORA8.3-201ENST00000384679 139 ntBASIC1.44□□□□□ -2.18
USP41Q3LFD5 Y_RNA.562-201ENST00000384695 113 ntBASIC1.44□□□□□ -2.18
USP41Q3LFD5 MIR452-201ENST00000385020 85 ntBASIC1.44□□□□□ -2.18
USP41Q3LFD5 snosnR66.1-201ENST00000391095 99 ntBASIC1.44□□□□□ -2.18
USP41Q3LFD5 MIR1276-201ENST00000408707 83 ntBASIC1.44□□□□□ -2.18
USP41Q3LFD5 RNU6-955P-201ENST00000410497 104 ntBASIC1.44□□□□□ -2.18
USP41Q3LFD5 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.44□□□□□ -2.18
USP41Q3LFD5 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.44□□□□□ -2.18
USP41Q3LFD5 AC023449.1-201ENST00000454464 154 ntBASIC1.44□□□□□ -2.18
USP41Q3LFD5 Y_RNA.650-201ENST00000459002 102 ntBASIC1.44□□□□□ -2.18
USP41Q3LFD5 SNORD11-201ENST00000459124 84 ntBASIC1.44□□□□□ -2.18
USP41Q3LFD5 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.44□□□□□ -2.18
USP41Q3LFD5 Y_RNA.777-201ENST00000516982 102 ntBASIC1.44□□□□□ -2.18
USP41Q3LFD5 FAM106DP-201ENST00000586416 501 ntBASIC1.44□□□□□ -2.18
USP41Q3LFD5 Y_RNA.771-201ENST00000598668 102 ntBASIC1.44□□□□□ -2.18
USP41Q3LFD5 AL049861.1-201ENST00000603130 150 ntBASIC1.44□□□□□ -2.18
USP41Q3LFD5 MIR6078-201ENST00000611069 100 ntBASIC1.44□□□□□ -2.18
USP41Q3LFD5 Y_RNA.789-201ENST00000622480 102 ntBASIC1.44□□□□□ -2.18
USP41Q3LFD5 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
USP41Q3LFD5 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
USP41Q3LFD5 Y_RNA.193-201ENST00000363979 102 ntBASIC1.43□□□□□ -2.18
USP41Q3LFD5 Y_RNA.350-201ENST00000365409 98 ntBASIC1.43□□□□□ -2.18
USP41Q3LFD5 SNORA2.2-201ENST00000365473 135 ntBASIC1.43□□□□□ -2.18
USP41Q3LFD5 Y_RNA.416-201ENST00000384014 113 ntBASIC1.43□□□□□ -2.18
USP41Q3LFD5 Y_RNA.572-201ENST00000384757 98 ntBASIC1.43□□□□□ -2.18
USP41Q3LFD5 MIR526A1-201ENST00000384897 85 ntBASIC1.43□□□□□ -2.18
USP41Q3LFD5 MIR526A2-201ENST00000390198 65 ntBASIC1.43□□□□□ -2.18
USP41Q3LFD5 HMGN2P32-201ENST00000444648 269 ntBASIC1.43□□□□□ -2.18
USP41Q3LFD5 SNORD2.1-201ENST00000458762 69 ntBASIC1.43□□□□□ -2.18
USP41Q3LFD5 RNU1-123P-201ENST00000458950 160 ntBASIC1.43□□□□□ -2.18
USP41Q3LFD5 RNU6-322P-201ENST00000516010 103 ntBASIC1.43□□□□□ -2.18
USP41Q3LFD5 RNA5SP61-201ENST00000516453 100 ntBASIC1.43□□□□□ -2.18
USP41Q3LFD5 RNU6-1007P-201ENST00000516586 107 ntBASIC1.43□□□□□ -2.18
USP41Q3LFD5 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.43□□□□□ -2.18
USP41Q3LFD5 AC087685.1-201ENST00000587507 141 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms