Protein–RNA interactions for Protein: Q16649

NFIL3, Nuclear factor interleukin-3-regulated protein, humanhuman

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3Q16649 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
NFIL3Q16649 ZNF209P-201ENST00000593450 2304 ntBASIC1.48□□□□□ -2.17
NFIL3Q16649 Y_RNA.117-201ENST00000363294 101 ntBASIC1.47□□□□□ -2.17
NFIL3Q16649 RNU6-383P-201ENST00000410864 94 ntBASIC1.47□□□□□ -2.17
NFIL3Q16649 RNU6-165P-201ENST00000517170 99 ntBASIC1.47□□□□□ -2.17
NFIL3Q16649 AL160236.1-201ENST00000556317 195 ntBASIC1.47□□□□□ -2.17
NFIL3Q16649 MIR4498-201ENST00000577599 66 ntBASIC1.47□□□□□ -2.17
NFIL3Q16649 MIR5688-201ENST00000580619 83 ntBASIC1.47□□□□□ -2.17
NFIL3Q16649 FAM106DP-201ENST00000586416 501 ntBASIC1.47□□□□□ -2.17
NFIL3Q16649 MIR7974-201ENST00000615835 79 ntBASIC1.47□□□□□ -2.17
NFIL3Q16649 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
NFIL3Q16649 Y_RNA.82-201ENST00000363000 102 ntBASIC1.46□□□□□ -2.18
NFIL3Q16649 Y_RNA.92-201ENST00000363043 102 ntBASIC1.46□□□□□ -2.18
NFIL3Q16649 Y_RNA.235-201ENST00000364412 102 ntBASIC1.46□□□□□ -2.18
NFIL3Q16649 Y_RNA.306-201ENST00000365015 102 ntBASIC1.46□□□□□ -2.18
NFIL3Q16649 Y_RNA.312-201ENST00000365089 102 ntBASIC1.46□□□□□ -2.18
NFIL3Q16649 Y_RNA.322-201ENST00000365151 102 ntBASIC1.46□□□□□ -2.18
NFIL3Q16649 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.46□□□□□ -2.18
NFIL3Q16649 RNA5SP496-201ENST00000391240 109 ntBASIC1.46□□□□□ -2.18
NFIL3Q16649 Y_RNA.650-201ENST00000459002 102 ntBASIC1.46□□□□□ -2.18
NFIL3Q16649 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.46□□□□□ -2.18
NFIL3Q16649 RNU6-1007P-201ENST00000516586 107 ntBASIC1.46□□□□□ -2.18
NFIL3Q16649 Y_RNA.777-201ENST00000516982 102 ntBASIC1.46□□□□□ -2.18
NFIL3Q16649 AC090142.3-201ENST00000519012 385 ntBASIC1.46□□□□□ -2.18
NFIL3Q16649 MIR4724-201ENST00000579485 89 ntBASIC1.46□□□□□ -2.18
NFIL3Q16649 MIR3660-201ENST00000584845 100 ntBASIC1.46□□□□□ -2.18
NFIL3Q16649 AC008507.4-201ENST00000585464 127 ntBASIC1.46□□□□□ -2.18
NFIL3Q16649 Y_RNA.771-201ENST00000598668 102 ntBASIC1.46□□□□□ -2.18
NFIL3Q16649 AL021707.8-201ENST00000609428 183 ntBASIC1.46□□□□□ -2.18
NFIL3Q16649 Y_RNA.789-201ENST00000622480 102 ntBASIC1.46□□□□□ -2.18
NFIL3Q16649 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
NFIL3Q16649 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
NFIL3Q16649 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
NFIL3Q16649 SNORD14E-201ENST00000364009 85 ntBASIC1.45□□□□□ -2.18
NFIL3Q16649 Y_RNA.293-201ENST00000364908 93 ntBASIC1.45□□□□□ -2.18
NFIL3Q16649 Y_RNA.556-201ENST00000384677 113 ntBASIC1.45□□□□□ -2.18
NFIL3Q16649 MIR526A2-201ENST00000390198 65 ntBASIC1.45□□□□□ -2.18
NFIL3Q16649 AC015922.2-201ENST00000435593 184 ntBASIC1.45□□□□□ -2.18
NFIL3Q16649 AL118496.2-201ENST00000448300 230 ntBASIC1.45□□□□□ -2.18
NFIL3Q16649 RPS29P23-201ENST00000458635 123 ntBASIC1.45□□□□□ -2.18
NFIL3Q16649 SNORD2.1-201ENST00000458762 69 ntBASIC1.45□□□□□ -2.18
NFIL3Q16649 RNU1-123P-201ENST00000458950 160 ntBASIC1.45□□□□□ -2.18
NFIL3Q16649 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.45□□□□□ -2.18
NFIL3Q16649 RN7SKP88-201ENST00000516847 250 ntBASIC1.45□□□□□ -2.18
NFIL3Q16649 AC012433.1-201ENST00000588916 398 ntBASIC1.45□□□□□ -2.18
NFIL3Q16649 snoU13.31-201ENST00000607291 104 ntBASIC1.45□□□□□ -2.18
NFIL3Q16649 7SK.8-201ENST00000612110 250 ntBASIC1.45□□□□□ -2.18
NFIL3Q16649 7SK.11-201ENST00000615477 250 ntBASIC1.45□□□□□ -2.18
NFIL3Q16649 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.45□□□□□ -2.18
NFIL3Q16649 7SK.13-201ENST00000622040 250 ntBASIC1.45□□□□□ -2.18
NFIL3Q16649 MIR136-201ENST00000385207 82 ntBASIC1.44□□□□□ -2.18
NFIL3Q16649 RNU6-651P-201ENST00000411040 105 ntBASIC1.44□□□□□ -2.18
NFIL3Q16649 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.44□□□□□ -2.18
NFIL3Q16649 SNRPGP14-201ENST00000435400 219 ntBASIC1.44□□□□□ -2.18
NFIL3Q16649 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.44□□□□□ -2.18
NFIL3Q16649 SNORD127-201ENST00000458892 86 ntBASIC1.44□□□□□ -2.18
NFIL3Q16649 DNAJC19P9-201ENST00000555084 351 ntBASIC1.44□□□□□ -2.18
NFIL3Q16649 MIR4282-201ENST00000583613 67 ntBASIC1.44□□□□□ -2.18
NFIL3Q16649 AL357312.1-201ENST00000603879 298 ntBASIC1.44□□□□□ -2.18
NFIL3Q16649 Y_RNA.802-201ENST00000614892 130 ntBASIC1.44□□□□□ -2.18
NFIL3Q16649 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
NFIL3Q16649 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
NFIL3Q16649 MIR367-201ENST00000362299 68 ntBASIC1.43□□□□□ -2.18
NFIL3Q16649 Y_RNA.14-201ENST00000362415 103 ntBASIC1.43□□□□□ -2.18
NFIL3Q16649 Y_RNA.238-201ENST00000364441 102 ntBASIC1.43□□□□□ -2.18
NFIL3Q16649 Y_RNA.242-201ENST00000364473 110 ntBASIC1.43□□□□□ -2.18
NFIL3Q16649 Y_RNA.288-201ENST00000364854 92 ntBASIC1.43□□□□□ -2.18
NFIL3Q16649 Y_RNA.352-201ENST00000365439 102 ntBASIC1.43□□□□□ -2.18
NFIL3Q16649 RNU6-442P-201ENST00000383968 104 ntBASIC1.43□□□□□ -2.18
NFIL3Q16649 SNORD26-201ENST00000384147 75 ntBASIC1.43□□□□□ -2.18
NFIL3Q16649 AL603910.2-201ENST00000407268 136 ntBASIC1.43□□□□□ -2.18
NFIL3Q16649 MIR1302-3-201ENST00000408128 138 ntBASIC1.43□□□□□ -2.18
NFIL3Q16649 AC004223.1-201ENST00000479840 271 ntBASIC1.43□□□□□ -2.18
NFIL3Q16649 MIR4781-201ENST00000585250 76 ntBASIC1.43□□□□□ -2.18
NFIL3Q16649 AL512598.1-201ENST00000610158 273 ntBASIC1.43□□□□□ -2.18
NFIL3Q16649 MIR516B2-201ENST00000385190 85 ntBASIC1.42□□□□□ -2.18
NFIL3Q16649 SNORD72-201ENST00000390994 80 ntBASIC1.42□□□□□ -2.18
NFIL3Q16649 SNORA40.6-201ENST00000391153 128 ntBASIC1.42□□□□□ -2.18
NFIL3Q16649 RNU2-38P-201ENST00000410856 79 ntBASIC1.42□□□□□ -2.18
NFIL3Q16649 AP1B1P2-201ENST00000416196 106 ntBASIC1.42□□□□□ -2.18
NFIL3Q16649 MTND3P2-201ENST00000438452 342 ntBASIC1.42□□□□□ -2.18
NFIL3Q16649 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.42□□□□□ -2.18
NFIL3Q16649 MIR4421-201ENST00000578133 69 ntBASIC1.42□□□□□ -2.18
NFIL3Q16649 Y_RNA.122-201ENST00000363331 96 ntBASIC1.41□□□□□ -2.18
NFIL3Q16649 RNU6-268P-201ENST00000364174 107 ntBASIC1.41□□□□□ -2.18
NFIL3Q16649 RNU4-10P-201ENST00000364383 140 ntBASIC1.41□□□□□ -2.18
NFIL3Q16649 Y_RNA.562-201ENST00000384695 113 ntBASIC1.41□□□□□ -2.18
NFIL3Q16649 MIR626-201ENST00000385032 94 ntBASIC1.41□□□□□ -2.18
NFIL3Q16649 MIR150-201ENST00000385048 84 ntBASIC1.41□□□□□ -2.18
NFIL3Q16649 AC023449.1-201ENST00000454464 154 ntBASIC1.41□□□□□ -2.18
NFIL3Q16649 RNU7-95P-201ENST00000459222 64 ntBASIC1.41□□□□□ -2.18
NFIL3Q16649 Y_RNA.668-201ENST00000516233 93 ntBASIC1.41□□□□□ -2.18
NFIL3Q16649 RNU1-92P-201ENST00000517017 135 ntBASIC1.41□□□□□ -2.18
NFIL3Q16649 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.41□□□□□ -2.18
NFIL3Q16649 uc_338.4-201ENST00000616635 176 ntBASIC1.41□□□□□ -2.18
NFIL3Q16649 MIR8065-201ENST00000620577 100 ntBASIC1.41□□□□□ -2.18
NFIL3Q16649 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.41□□□□□ -2.18
NFIL3Q16649 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
NFIL3Q16649 SNORA8.3-201ENST00000384679 139 ntBASIC1.4□□□□□ -2.19
NFIL3Q16649 MIR15B-201ENST00000385045 98 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms